| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934226
Identifier: 187934226
GI number: 187934226
Start: 2809176
End: 2809688
Strand: Reverse
Name: 187934226
Synonym: CLL_A2695
Alternate gene names: NA
Gene position: 2809688-2809176 (Counterclockwise)
Preceding gene: 187932788
Following gene: 187934748
Centisome position: 73.93
GC content: 31.58
Gene sequence:
>513_bases ATGATATACATATATAATTGTTATGGAGGAACTCACTCATCTATTCTAGCTATTGCTTATCATTTAAAAATGCTAGATGA AACTCGAGAACCAACTAAGGAAGAAATATTGAATTTACCAAACTTTAATAAGTTAGTATATGGAAATCGTGGAGAACTTT TTTATTATGGAAGTGACAAGGATGGAAACGAAGTTTATGCTATGGGAAGGGGAAGTTCAAAGGTCTTAATTCCGGGACTA TACAATTTAGCTTCGATGCTCCATAAACAAAAGCTATTAAATGAGAAAATTATATTTTCCAATACATCGCCAACGGTTCC ATTACCAATGACTTTAGGGGGAGTATTTTCTAGATGGTTAAAAATTGATTTTATAGGAGTACCTTTGCTCGTAAAGGGAG CAAAAAAATCATACAAGGACATTGTAAAACTAGTAAGTCACACAAAGAAAGCAGCAAATGAAGATGAGTCAGGGGTTATT ATTTTAGATAATAAAGAATTTAAGAAAAAATAA
Upstream 100 bases:
>100_bases TTACAAATAAGGGTAATTAATGTGTTGTTTAGTTCAAACATTTAATGCATATACTATAATTATCAAAATAAAGTAAAAAA TAAGAAATTAGGTGATTTTA
Downstream 100 bases:
>100_bases TTAATATTGGAGTGGAAAAATGGACACGATAGAGAAAGAACTACAACAGAAAGTTATAAAAAATTGCGAAATAGCAGAAA AAGAATGTGGTTGTAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIYIYNCYGGTHSSILAIAYHLKMLDETREPTKEEILNLPNFNKLVYGNRGELFYYGSDKDGNEVYAMGRGSSKVLIPGL YNLASMLHKQKLLNEKIIFSNTSPTVPLPMTLGGVFSRWLKIDFIGVPLLVKGAKKSYKDIVKLVSHTKKAANEDESGVI ILDNKEFKKK
Sequences:
>Translated_170_residues MIYIYNCYGGTHSSILAIAYHLKMLDETREPTKEEILNLPNFNKLVYGNRGELFYYGSDKDGNEVYAMGRGSSKVLIPGL YNLASMLHKQKLLNEKIIFSNTSPTVPLPMTLGGVFSRWLKIDFIGVPLLVKGAKKSYKDIVKLVSHTKKAANEDESGVI ILDNKEFKKK >Mature_170_residues MIYIYNCYGGTHSSILAIAYHLKMLDETREPTKEEILNLPNFNKLVYGNRGELFYYGSDKDGNEVYAMGRGSSKVLIPGL YNLASMLHKQKLLNEKIIFSNTSPTVPLPMTLGGVFSRWLKIDFIGVPLLVKGAKKSYKDIVKLVSHTKKAANEDESGVI ILDNKEFKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19150; Mature: 19150
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYIYNCYGGTHSSILAIAYHLKMLDETREPTKEEILNLPNFNKLVYGNRGELFYYGSDK CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCCEEEECCCC DGNEVYAMGRGSSKVLIPGLYNLASMLHKQKLLNEKIIFSNTSPTVPLPMTLGGVFSRWL CCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHH KIDFIGVPLLVKGAKKSYKDIVKLVSHTKKAANEDESGVIILDNKEFKKK HHEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCC >Mature Secondary Structure MIYIYNCYGGTHSSILAIAYHLKMLDETREPTKEEILNLPNFNKLVYGNRGELFYYGSDK CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCCEEEECCCC DGNEVYAMGRGSSKVLIPGLYNLASMLHKQKLLNEKIIFSNTSPTVPLPMTLGGVFSRWL CCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHH KIDFIGVPLLVKGAKKSYKDIVKLVSHTKKAANEDESGVIILDNKEFKKK HHEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA