| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934040
Identifier: 187934040
GI number: 187934040
Start: 2673816
End: 2674847
Strand: Reverse
Name: 187934040
Synonym: CLL_A2565
Alternate gene names: NA
Gene position: 2674847-2673816 (Counterclockwise)
Preceding gene: 187933238
Following gene: 187935655
Centisome position: 70.38
GC content: 27.71
Gene sequence:
>1032_bases ATGAAAGTTATTAAGAGAATAATTTCTTGGGGAATGCTATCTCTAATATTACAATTTGCTGGTTTGTTCATTTTAGATAG TTTTGTTTTTAAACATTCTTCAGATTTTAAAATAAAAAAAGTGGAAACCGATGTGGCAGATACTAAGAATGTAAATGCAA CTATTCCTAATGGTGCAGAAGATGTAAAAATATCTTATGATGGAAGATATTTAACTTACAATTATAATGACAAAGTATAT ATAGAAGATACATCAACAAATGAAAAAAATGAAATTAAAACTGAAGATGGTGGAGAAATAATGTATTACAAGTGGCTATC TGATAGAGATAGAATAGTAATAGCTGAAAATACTAATATAGATGATGAAGACAAGATAAAACTTGTGACATATGATCCAA CTAATAAAGTTCAAAGTGATGTAAGTGAAGTATGTAGCTATCAAAGTAATATGGAAGTAAAAAAGATAAGTGTTTCAGTT CTTACAGGTGTGTATTATGTTGACATAGATAGAGGTGGAATGAAGAACACTGTTTATAGAATAGACATAAATCATGATTT AACAAAAGTATCTCTTAAATCTGATGTGTTAGGTAATATGGAGGTTATTCCACGTTACGATAGATTGATTTATGAAGATG AAATAAACAATACGTTTTATGCAACAAGTCCTAGCAAGAAATTATCAATCAAATCAGATAAAGAATTAGCATTACTTGGA ATTGATGCTGAGGGTGTTATATATATTGGTGAAATAACAGCAGATAAGGTATCAAAGATAATATATGGTACAGTAGATGA AGATACATCTGCATGGAAAAATATTGATTTAACTGAAGTAGTAAATCCTAAAGATATATATTTTAATAGTAAAAGTGAAA TACTAATTAATGACAATCTTCAAGGAATAGTAAAAAATCTTACTACAGGAAAAGAAATGTCATATGACGGGAAACTAGTT GAAATAAAAGAAAAGTTTGTAGCGACAGTTGTAGATGGAAAATTATCATATACTAGTTTAGTAGAAGAATAA
Upstream 100 bases:
>100_bases GTATTACAATGATAAGATAATAAATAATCCATCAGATAGCTTAGGAGAAAGAGCAATACCAACAGCAATTATTGTTGAGT AAAAAGGAGAGACAAAAATA
Downstream 100 bases:
>100_bases GAATTTTTATATATGAAACTATCTCTAAAGATATTAAGTTTGTAACTGTATTTAAACAAATTTTTAATTTAAAGAGATAG TTTCATTATTTTATTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKVIKRIISWGMLSLILQFAGLFILDSFVFKHSSDFKIKKVETDVADTKNVNATIPNGAEDVKISYDGRYLTYNYNDKVY IEDTSTNEKNEIKTEDGGEIMYYKWLSDRDRIVIAENTNIDDEDKIKLVTYDPTNKVQSDVSEVCSYQSNMEVKKISVSV LTGVYYVDIDRGGMKNTVYRIDINHDLTKVSLKSDVLGNMEVIPRYDRLIYEDEINNTFYATSPSKKLSIKSDKELALLG IDAEGVIYIGEITADKVSKIIYGTVDEDTSAWKNIDLTEVVNPKDIYFNSKSEILINDNLQGIVKNLTTGKEMSYDGKLV EIKEKFVATVVDGKLSYTSLVEE
Sequences:
>Translated_343_residues MKVIKRIISWGMLSLILQFAGLFILDSFVFKHSSDFKIKKVETDVADTKNVNATIPNGAEDVKISYDGRYLTYNYNDKVY IEDTSTNEKNEIKTEDGGEIMYYKWLSDRDRIVIAENTNIDDEDKIKLVTYDPTNKVQSDVSEVCSYQSNMEVKKISVSV LTGVYYVDIDRGGMKNTVYRIDINHDLTKVSLKSDVLGNMEVIPRYDRLIYEDEINNTFYATSPSKKLSIKSDKELALLG IDAEGVIYIGEITADKVSKIIYGTVDEDTSAWKNIDLTEVVNPKDIYFNSKSEILINDNLQGIVKNLTTGKEMSYDGKLV EIKEKFVATVVDGKLSYTSLVEE >Mature_343_residues MKVIKRIISWGMLSLILQFAGLFILDSFVFKHSSDFKIKKVETDVADTKNVNATIPNGAEDVKISYDGRYLTYNYNDKVY IEDTSTNEKNEIKTEDGGEIMYYKWLSDRDRIVIAENTNIDDEDKIKLVTYDPTNKVQSDVSEVCSYQSNMEVKKISVSV LTGVYYVDIDRGGMKNTVYRIDINHDLTKVSLKSDVLGNMEVIPRYDRLIYEDEINNTFYATSPSKKLSIKSDKELALLG IDAEGVIYIGEITADKVSKIIYGTVDEDTSAWKNIDLTEVVNPKDIYFNSKSEILINDNLQGIVKNLTTGKEMSYDGKLV EIKEKFVATVVDGKLSYTSLVEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38917; Mature: 38917
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIKRIISWGMLSLILQFAGLFILDSFVFKHSSDFKIKKVETDVADTKNVNATIPNGAE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCC DVKISYDGRYLTYNYNDKVYIEDTSTNEKNEIKTEDGGEIMYYKWLSDRDRIVIAENTNI EEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCC DDEDKIKLVTYDPTNKVQSDVSEVCSYQSNMEVKKISVSVLTGVYYVDIDRGGMKNTVYR CCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEE IDINHDLTKVSLKSDVLGNMEVIPRYDRLIYEDEINNTFYATSPSKKLSIKSDKELALLG EECCCCEEEEEECHHCCCCEEECCCHHHEEEEECCCCEEEEECCCCEEEECCCCCEEEEE IDAEGVIYIGEITADKVSKIIYGTVDEDTSAWKNIDLTEVVNPKDIYFNSKSEILINDNL ECCCCEEEEEEECHHHHCEEEEEECCCCCHHHCCCCHHHCCCCCCEEECCCCCEEEECCH QGIVKNLTTGKEMSYDGKLVEIKEKFVATVVDGKLSYTSLVEE HHHHHHHCCCCCCCCCCCEEEEHHHEEEEEECCCCCHHHHHCC >Mature Secondary Structure MKVIKRIISWGMLSLILQFAGLFILDSFVFKHSSDFKIKKVETDVADTKNVNATIPNGAE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCC DVKISYDGRYLTYNYNDKVYIEDTSTNEKNEIKTEDGGEIMYYKWLSDRDRIVIAENTNI EEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCC DDEDKIKLVTYDPTNKVQSDVSEVCSYQSNMEVKKISVSVLTGVYYVDIDRGGMKNTVYR CCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEE IDINHDLTKVSLKSDVLGNMEVIPRYDRLIYEDEINNTFYATSPSKKLSIKSDKELALLG EECCCCEEEEEECHHCCCCEEECCCHHHEEEEECCCCEEEEECCCCEEEECCCCCEEEEE IDAEGVIYIGEITADKVSKIIYGTVDEDTSAWKNIDLTEVVNPKDIYFNSKSEILINDNL ECCCCEEEEEEECHHHHCEEEEEECCCCCHHHCCCCHHHCCCCCCEEECCCCCEEEECCH QGIVKNLTTGKEMSYDGKLVEIKEKFVATVVDGKLSYTSLVEE HHHHHHHCCCCCCCCCCCEEEEHHHEEEEEECCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA