Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187934040

Identifier: 187934040

GI number: 187934040

Start: 2673816

End: 2674847

Strand: Reverse

Name: 187934040

Synonym: CLL_A2565

Alternate gene names: NA

Gene position: 2674847-2673816 (Counterclockwise)

Preceding gene: 187933238

Following gene: 187935655

Centisome position: 70.38

GC content: 27.71

Gene sequence:

>1032_bases
ATGAAAGTTATTAAGAGAATAATTTCTTGGGGAATGCTATCTCTAATATTACAATTTGCTGGTTTGTTCATTTTAGATAG
TTTTGTTTTTAAACATTCTTCAGATTTTAAAATAAAAAAAGTGGAAACCGATGTGGCAGATACTAAGAATGTAAATGCAA
CTATTCCTAATGGTGCAGAAGATGTAAAAATATCTTATGATGGAAGATATTTAACTTACAATTATAATGACAAAGTATAT
ATAGAAGATACATCAACAAATGAAAAAAATGAAATTAAAACTGAAGATGGTGGAGAAATAATGTATTACAAGTGGCTATC
TGATAGAGATAGAATAGTAATAGCTGAAAATACTAATATAGATGATGAAGACAAGATAAAACTTGTGACATATGATCCAA
CTAATAAAGTTCAAAGTGATGTAAGTGAAGTATGTAGCTATCAAAGTAATATGGAAGTAAAAAAGATAAGTGTTTCAGTT
CTTACAGGTGTGTATTATGTTGACATAGATAGAGGTGGAATGAAGAACACTGTTTATAGAATAGACATAAATCATGATTT
AACAAAAGTATCTCTTAAATCTGATGTGTTAGGTAATATGGAGGTTATTCCACGTTACGATAGATTGATTTATGAAGATG
AAATAAACAATACGTTTTATGCAACAAGTCCTAGCAAGAAATTATCAATCAAATCAGATAAAGAATTAGCATTACTTGGA
ATTGATGCTGAGGGTGTTATATATATTGGTGAAATAACAGCAGATAAGGTATCAAAGATAATATATGGTACAGTAGATGA
AGATACATCTGCATGGAAAAATATTGATTTAACTGAAGTAGTAAATCCTAAAGATATATATTTTAATAGTAAAAGTGAAA
TACTAATTAATGACAATCTTCAAGGAATAGTAAAAAATCTTACTACAGGAAAAGAAATGTCATATGACGGGAAACTAGTT
GAAATAAAAGAAAAGTTTGTAGCGACAGTTGTAGATGGAAAATTATCATATACTAGTTTAGTAGAAGAATAA

Upstream 100 bases:

>100_bases
GTATTACAATGATAAGATAATAAATAATCCATCAGATAGCTTAGGAGAAAGAGCAATACCAACAGCAATTATTGTTGAGT
AAAAAGGAGAGACAAAAATA

Downstream 100 bases:

>100_bases
GAATTTTTATATATGAAACTATCTCTAAAGATATTAAGTTTGTAACTGTATTTAAACAAATTTTTAATTTAAAGAGATAG
TTTCATTATTTTATTGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKVIKRIISWGMLSLILQFAGLFILDSFVFKHSSDFKIKKVETDVADTKNVNATIPNGAEDVKISYDGRYLTYNYNDKVY
IEDTSTNEKNEIKTEDGGEIMYYKWLSDRDRIVIAENTNIDDEDKIKLVTYDPTNKVQSDVSEVCSYQSNMEVKKISVSV
LTGVYYVDIDRGGMKNTVYRIDINHDLTKVSLKSDVLGNMEVIPRYDRLIYEDEINNTFYATSPSKKLSIKSDKELALLG
IDAEGVIYIGEITADKVSKIIYGTVDEDTSAWKNIDLTEVVNPKDIYFNSKSEILINDNLQGIVKNLTTGKEMSYDGKLV
EIKEKFVATVVDGKLSYTSLVEE

Sequences:

>Translated_343_residues
MKVIKRIISWGMLSLILQFAGLFILDSFVFKHSSDFKIKKVETDVADTKNVNATIPNGAEDVKISYDGRYLTYNYNDKVY
IEDTSTNEKNEIKTEDGGEIMYYKWLSDRDRIVIAENTNIDDEDKIKLVTYDPTNKVQSDVSEVCSYQSNMEVKKISVSV
LTGVYYVDIDRGGMKNTVYRIDINHDLTKVSLKSDVLGNMEVIPRYDRLIYEDEINNTFYATSPSKKLSIKSDKELALLG
IDAEGVIYIGEITADKVSKIIYGTVDEDTSAWKNIDLTEVVNPKDIYFNSKSEILINDNLQGIVKNLTTGKEMSYDGKLV
EIKEKFVATVVDGKLSYTSLVEE
>Mature_343_residues
MKVIKRIISWGMLSLILQFAGLFILDSFVFKHSSDFKIKKVETDVADTKNVNATIPNGAEDVKISYDGRYLTYNYNDKVY
IEDTSTNEKNEIKTEDGGEIMYYKWLSDRDRIVIAENTNIDDEDKIKLVTYDPTNKVQSDVSEVCSYQSNMEVKKISVSV
LTGVYYVDIDRGGMKNTVYRIDINHDLTKVSLKSDVLGNMEVIPRYDRLIYEDEINNTFYATSPSKKLSIKSDKELALLG
IDAEGVIYIGEITADKVSKIIYGTVDEDTSAWKNIDLTEVVNPKDIYFNSKSEILINDNLQGIVKNLTTGKEMSYDGKLV
EIKEKFVATVVDGKLSYTSLVEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38917; Mature: 38917

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIKRIISWGMLSLILQFAGLFILDSFVFKHSSDFKIKKVETDVADTKNVNATIPNGAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCC
DVKISYDGRYLTYNYNDKVYIEDTSTNEKNEIKTEDGGEIMYYKWLSDRDRIVIAENTNI
EEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCC
DDEDKIKLVTYDPTNKVQSDVSEVCSYQSNMEVKKISVSVLTGVYYVDIDRGGMKNTVYR
CCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEE
IDINHDLTKVSLKSDVLGNMEVIPRYDRLIYEDEINNTFYATSPSKKLSIKSDKELALLG
EECCCCEEEEEECHHCCCCEEECCCHHHEEEEECCCCEEEEECCCCEEEECCCCCEEEEE
IDAEGVIYIGEITADKVSKIIYGTVDEDTSAWKNIDLTEVVNPKDIYFNSKSEILINDNL
ECCCCEEEEEEECHHHHCEEEEEECCCCCHHHCCCCHHHCCCCCCEEECCCCCEEEECCH
QGIVKNLTTGKEMSYDGKLVEIKEKFVATVVDGKLSYTSLVEE
HHHHHHHCCCCCCCCCCCEEEEHHHEEEEEECCCCCHHHHHCC
>Mature Secondary Structure
MKVIKRIISWGMLSLILQFAGLFILDSFVFKHSSDFKIKKVETDVADTKNVNATIPNGAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCC
DVKISYDGRYLTYNYNDKVYIEDTSTNEKNEIKTEDGGEIMYYKWLSDRDRIVIAENTNI
EEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCC
DDEDKIKLVTYDPTNKVQSDVSEVCSYQSNMEVKKISVSVLTGVYYVDIDRGGMKNTVYR
CCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEE
IDINHDLTKVSLKSDVLGNMEVIPRYDRLIYEDEINNTFYATSPSKKLSIKSDKELALLG
EECCCCEEEEEECHHCCCCEEECCCHHHEEEEECCCCEEEEECCCCEEEECCCCCEEEEE
IDAEGVIYIGEITADKVSKIIYGTVDEDTSAWKNIDLTEVVNPKDIYFNSKSEILINDNL
ECCCCEEEEEEECHHHHCEEEEEECCCCCHHHCCCCHHHCCCCCCEEECCCCCEEEECCH
QGIVKNLTTGKEMSYDGKLVEIKEKFVATVVDGKLSYTSLVEE
HHHHHHHCCCCCCCCCCCEEEEHHHEEEEEECCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA