| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933953
Identifier: 187933953
GI number: 187933953
Start: 1367893
End: 1368282
Strand: Reverse
Name: 187933953
Synonym: CLL_A1330
Alternate gene names: NA
Gene position: 1368282-1367893 (Counterclockwise)
Preceding gene: 187933722
Following gene: 187932384
Centisome position: 36.0
GC content: 26.15
Gene sequence:
>390_bases ATGTATGATGTAGATGATTTTTTTAATCATCCAGAACATAGGATGTATATAAAATATGAACCTTTTTATCTTACACCTAA AATATTTTATTTTTTATGTGAAGCTAAAAGTATTTATAACATGATTGAAGCTGCTAAATCTAATAGACCTGCTCTTGAAG GTGTAATTCCAGAAATCGAAGATTTTTTTGAAGCTGGAATGCCTGAAGATATGTTTAAACAAATGATTGGACGTATGGTT AAATTTATTCTTAGAGATTTTGGATGTTTTCCTCTTGAAAAAATCCCTACTCTTAAAAGAAAAAATACTATATTTAAATC TGGATTAAAATACACTTATGATGAATCTAGAGCTAGAAGAAAAATTAAAGTTCATTATGAAATAGTATAA
Upstream 100 bases:
>100_bases CTTTCTATTAATAATTATTGATAAAATTCTAAAATTATGTTATTTTTAATTAAGGTATGTTACGCTAACGTTTAATTCAA TATAATTAAGGAGTGATTAT
Downstream 100 bases:
>100_bases TAATACTATGTTTTAGTAAAATGTCTATATATGCATAAGCAAAGCTGGACTGAGTAATTGTACTTTGCCTATTGCATAGA TAAACATTAGCTTAAAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MYDVDDFFNHPEHRMYIKYEPFYLTPKIFYFLCEAKSIYNMIEAAKSNRPALEGVIPEIEDFFEAGMPEDMFKQMIGRMV KFILRDFGCFPLEKIPTLKRKNTIFKSGLKYTYDESRARRKIKVHYEIV
Sequences:
>Translated_129_residues MYDVDDFFNHPEHRMYIKYEPFYLTPKIFYFLCEAKSIYNMIEAAKSNRPALEGVIPEIEDFFEAGMPEDMFKQMIGRMV KFILRDFGCFPLEKIPTLKRKNTIFKSGLKYTYDESRARRKIKVHYEIV >Mature_129_residues MYDVDDFFNHPEHRMYIKYEPFYLTPKIFYFLCEAKSIYNMIEAAKSNRPALEGVIPEIEDFFEAGMPEDMFKQMIGRMV KFILRDFGCFPLEKIPTLKRKNTIFKSGLKYTYDESRARRKIKVHYEIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15531; Mature: 15531
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDVDDFFNHPEHRMYIKYEPFYLTPKIFYFLCEAKSIYNMIEAAKSNRPALEGVIPEIE CCCCHHHHCCCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHH DFFEAGMPEDMFKQMIGRMVKFILRDFGCFPLEKIPTLKRKNTIFKSGLKYTYDESRARR HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCCCCCHHHHHC KIKVHYEIV EEEEEEEEC >Mature Secondary Structure MYDVDDFFNHPEHRMYIKYEPFYLTPKIFYFLCEAKSIYNMIEAAKSNRPALEGVIPEIE CCCCHHHHCCCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHH DFFEAGMPEDMFKQMIGRMVKFILRDFGCFPLEKIPTLKRKNTIFKSGLKYTYDESRARR HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCCCCCHHHHHC KIKVHYEIV EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA