| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933923
Identifier: 187933923
GI number: 187933923
Start: 2693567
End: 2694694
Strand: Reverse
Name: 187933923
Synonym: CLL_A2583
Alternate gene names: NA
Gene position: 2694694-2693567 (Counterclockwise)
Preceding gene: 187933190
Following gene: 187934313
Centisome position: 70.91
GC content: 23.32
Gene sequence:
>1128_bases GTGAGTAAAAAAATTAAAAATAGGCTAAAAGCAATTTTAGTATTTTTAATTTGTATAATTTTATTTGTTATACATTTTTC TAAAATAAATCAAGTTAAAGAAATTGAAATTCTAACTTGGGAGAATTATTATAATGAAAATAATATTGCTTTTTTTTATG ATGATGAAAATAATGAAAAGATTAAATCTTTAGACAATACATATAAAGTTAAAGAAGTATTAAATGAATCGGATAAGGAA ATAGACAAAGTATTAAAAAGTATTGATATTTTAAATGCAATTTGTCAATATGATGATATAGATGATTTAAAACAGAAATC AGCATATGATATTTTTAAAAAATTAGGTGGAAGAAGAAAAGTATCTGCTAAAGATATGGCAATCATAGAAAGAGATTTAT TAGCTTCATATGGTTTTAAAAGTAGAGTAGGAGCTTTTAAAATGAAAGATGCAGCTTTTGAAGACAAATATAATTATTAC GTTGTTGAATACTGGAGTAATGAAAATAACAAGTGGGTAATGATAGATCCGTTAGATAAAGGCTATTTTAGAGAACGAGA TACTTTATTATCAGCAATAGAGGTAATGACTAAGGAATTTAATCCACTATTTTATGAAGGTAAAACTAAAGAAAAAGAAT ATAAAAATAACCTTAAAAAGTATTTTGGCTCATATAGCATAGAAATAGACAATACTATAAAAAATAATAAGAGTAATACA TCAATAACATATATAAAAAATGAAAAGGCTTTAGAACTTAAATTTAAAGATGAATTTGGGCCACCAACAATTTTTACACA GGAAACAAAACTTTTTGAAAAAAGTCCTGAAGATAATAAAGTAGGACAAGATGAAAAAGCATATCTAATCTTAATGGAAA AGCAAGATTTGGTTAAAATAACTGAAAATAATCAAGGAAAAGATCAAAATAAAGATAGTATATTTATGATATTAGGTGCA TTTAAAGATGGCAAAATTATGGATGAATATTATTTAAGCACTAATAATTATGAATATGAAAAAATCAATAAATATAAAGA GATTGAAATACCTAAAGGCGAAACAGAGTTAAATTTATCTATAGATGGGGTAAATGTGATAAGTAAAATAATTTTAAGGA AAAATTAA
Upstream 100 bases:
>100_bases TTTGCATTGTATATTATAGTTTCTAAGCTATTATGAGACAGTCCATTAAATCATGTTTAAGATAATATTTTAAATAGCGA GTTTAAAGGGGGATAAGGGT
Downstream 100 bases:
>100_bases TAATATATAACATAATAAGTATTATAATTTAAAGTGGAAAAATAGTAGAAAGAGAGTGATAAAAGAAGATGGGATTAGAC TTTTTATTCATATTTAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSKKIKNRLKAILVFLICIILFVIHFSKINQVKEIEILTWENYYNENNIAFFYDDENNEKIKSLDNTYKVKEVLNESDKE IDKVLKSIDILNAICQYDDIDDLKQKSAYDIFKKLGGRRKVSAKDMAIIERDLLASYGFKSRVGAFKMKDAAFEDKYNYY VVEYWSNENNKWVMIDPLDKGYFRERDTLLSAIEVMTKEFNPLFYEGKTKEKEYKNNLKKYFGSYSIEIDNTIKNNKSNT SITYIKNEKALELKFKDEFGPPTIFTQETKLFEKSPEDNKVGQDEKAYLILMEKQDLVKITENNQGKDQNKDSIFMILGA FKDGKIMDEYYLSTNNYEYEKINKYKEIEIPKGETELNLSIDGVNVISKIILRKN
Sequences:
>Translated_375_residues MSKKIKNRLKAILVFLICIILFVIHFSKINQVKEIEILTWENYYNENNIAFFYDDENNEKIKSLDNTYKVKEVLNESDKE IDKVLKSIDILNAICQYDDIDDLKQKSAYDIFKKLGGRRKVSAKDMAIIERDLLASYGFKSRVGAFKMKDAAFEDKYNYY VVEYWSNENNKWVMIDPLDKGYFRERDTLLSAIEVMTKEFNPLFYEGKTKEKEYKNNLKKYFGSYSIEIDNTIKNNKSNT SITYIKNEKALELKFKDEFGPPTIFTQETKLFEKSPEDNKVGQDEKAYLILMEKQDLVKITENNQGKDQNKDSIFMILGA FKDGKIMDEYYLSTNNYEYEKINKYKEIEIPKGETELNLSIDGVNVISKIILRKN >Mature_374_residues SKKIKNRLKAILVFLICIILFVIHFSKINQVKEIEILTWENYYNENNIAFFYDDENNEKIKSLDNTYKVKEVLNESDKEI DKVLKSIDILNAICQYDDIDDLKQKSAYDIFKKLGGRRKVSAKDMAIIERDLLASYGFKSRVGAFKMKDAAFEDKYNYYV VEYWSNENNKWVMIDPLDKGYFRERDTLLSAIEVMTKEFNPLFYEGKTKEKEYKNNLKKYFGSYSIEIDNTIKNNKSNTS ITYIKNEKALELKFKDEFGPPTIFTQETKLFEKSPEDNKVGQDEKAYLILMEKQDLVKITENNQGKDQNKDSIFMILGAF KDGKIMDEYYLSTNNYEYEKINKYKEIEIPKGETELNLSIDGVNVISKIILRKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44166; Mature: 44035
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKIKNRLKAILVFLICIILFVIHFSKINQVKEIEILTWENYYNENNIAFFYDDENNEK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECEECCCCEEEEEECCCCCH IKSLDNTYKVKEVLNESDKEIDKVLKSIDILNAICQYDDIDDLKQKSAYDIFKKLGGRRK HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC VSAKDMAIIERDLLASYGFKSRVGAFKMKDAAFEDKYNYYVVEYWSNENNKWVMIDPLDK CCHHHHHHHHHHHHHHCCCHHHCCCEEECCCCCCCCCCEEEEEEEECCCCCEEEECCCCC GYFRERDTLLSAIEVMTKEFNPLFYEGKTKEKEYKNNLKKYFGSYSIEIDNTIKNNKSNT CHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCC SITYIKNEKALELKFKDEFGPPTIFTQETKLFEKSPEDNKVGQDEKAYLILMEKQDLVKI EEEEEECCCEEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEE TENNQGKDQNKDSIFMILGAFKDGKIMDEYYLSTNNYEYEKINKYKEIEIPKGETELNLS ECCCCCCCCCCCEEEEEEEECCCCCEEHHEEECCCCCCHHHHCCEEEEECCCCCCEEEEE IDGVNVISKIILRKN ECHHHHHHHHHHCCC >Mature Secondary Structure SKKIKNRLKAILVFLICIILFVIHFSKINQVKEIEILTWENYYNENNIAFFYDDENNEK CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECEECCCCEEEEEECCCCCH IKSLDNTYKVKEVLNESDKEIDKVLKSIDILNAICQYDDIDDLKQKSAYDIFKKLGGRRK HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC VSAKDMAIIERDLLASYGFKSRVGAFKMKDAAFEDKYNYYVVEYWSNENNKWVMIDPLDK CCHHHHHHHHHHHHHHCCCHHHCCCEEECCCCCCCCCCEEEEEEEECCCCCEEEECCCCC GYFRERDTLLSAIEVMTKEFNPLFYEGKTKEKEYKNNLKKYFGSYSIEIDNTIKNNKSNT CHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCC SITYIKNEKALELKFKDEFGPPTIFTQETKLFEKSPEDNKVGQDEKAYLILMEKQDLVKI EEEEEECCCEEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEE TENNQGKDQNKDSIFMILGAFKDGKIMDEYYLSTNNYEYEKINKYKEIEIPKGETELNLS ECCCCCCCCCCCEEEEEEEECCCCCEEHHEEECCCCCCHHHHCCEEEEECCCCCCEEEEE IDGVNVISKIILRKN ECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA