| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933854
Identifier: 187933854
GI number: 187933854
Start: 2284113
End: 2285396
Strand: Reverse
Name: 187933854
Synonym: CLL_A2199
Alternate gene names: NA
Gene position: 2285396-2284113 (Counterclockwise)
Preceding gene: 187935206
Following gene: 187932522
Centisome position: 60.14
GC content: 25.93
Gene sequence:
>1284_bases ATGTTAAATAAAAAATTAAGCAAAATATTAGGACCAATACTTGGTGTTATGGTATTTATGACAAGCTTGGGGGTAGGACA AGTTAAGGTTTTAGCAGATGATAAGGTAAGTGAGACTTCAGTAACTTGTGAAAATACAAGTTATGATAAGGAAGAGGACT ATTCATTTAAAATAAATAAAAGTGTTGAGCAAAATGGTTTTAAAATAACTTTAGATAGTGCTATTGCAACAAAAAACAAG TTAAAAATATTAGTTAAAGTAGAGAGTAAAGAATCTATTGATAAAGAAAAAGCAGATAATTTGATAAGTATAGTTACATT TGGAGAAAATTTTAGGGATAGTTCAGGCTATTGGAATGATTATAAGGATGATAAAACATTTTTTATAAATATAAACGAAG AAAGTGACGAAGAAGAATTTCTTGAAAAAGATAGTTTAAGAGTAGATATTGTAATACCTACTTATAAAATTAATATTGGA ATAGATGCAGATGTAGATTTCTCAAAGTCATTTAAAGAGTCAGTTAAAAAGAAAATGAATGCTAAAATACCAGAATTTGA TTTTACAGTAAATAACATAGAATCAGATATTATGGGAACAACAATTAATTATAGTGGTCCATGGATAGAAAATAGATTCG AAAATGATGAGCCATCAGACTCACCTCATTCTTGTATCATATTACAAGTTGGAGATAAAATGTATAAAGCAAAACGAGGT GGTAGTAGTGCTTCAAAAGAAAATGGAACTAATGGAAAATTTGTTTGTGAATCACTTAATTATGATAAATTTAAAGAATC AGAAAAGATAAGTATAATACCTTTAGTTAGTTATGTTTCTTATGATAGATTAAATGAACTGTGTAAAAATGAAGATAGAA GTGAGCACTACGAGAAAATAAATAATTACAAAGAAATAAAAGATAATGTTAGATATTTAAAATCATTTGATTTTTATGAT GGAAGTAAGGGAGAAATATATAATATAGAAAGAAATGATAGTACCATAAAAATATATTGCAAAGGGAATACAGAAAAAGC AGGGCTTTTAATGGTAACTAACATGTTTATTGATTATGAAGTGGATGTTGAAAAGTTTAATTATGAAAATAATTATGATG GTAGGAAGAATATGAGTTTTTATAAAGATCCAAGTGATGAACTTGGATATGTTGTAGAATTTAACAATGTACCAAAAGAT AAAACTATGGATATGAATTTTGATTTTAATATAAGTAAAATAGATAAATATGAAATAGGAACTGAAGTAGAACTATCTAA ATAA
Upstream 100 bases:
>100_bases AAAATTATATGACTTTAATTAAGCTCTAGTTAAATAATGTATAAAAAATTTTAGCTTAATAATTAAAATTAAAGTTGAAT TTTTAAAAGGGAGAATTTTA
Downstream 100 bases:
>100_bases CAGTTTAGTTGTTTAGGATTAAGTATTAGGACTGTTAGATTAAAAATGTTGAGTTACACTATAAAAAGTAGTTAAAAATA AGACTACTTTTTATAGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MLNKKLSKILGPILGVMVFMTSLGVGQVKVLADDKVSETSVTCENTSYDKEEDYSFKINKSVEQNGFKITLDSAIATKNK LKILVKVESKESIDKEKADNLISIVTFGENFRDSSGYWNDYKDDKTFFININEESDEEEFLEKDSLRVDIVIPTYKINIG IDADVDFSKSFKESVKKKMNAKIPEFDFTVNNIESDIMGTTINYSGPWIENRFENDEPSDSPHSCIILQVGDKMYKAKRG GSSASKENGTNGKFVCESLNYDKFKESEKISIIPLVSYVSYDRLNELCKNEDRSEHYEKINNYKEIKDNVRYLKSFDFYD GSKGEIYNIERNDSTIKIYCKGNTEKAGLLMVTNMFIDYEVDVEKFNYENNYDGRKNMSFYKDPSDELGYVVEFNNVPKD KTMDMNFDFNISKIDKYEIGTEVELSK
Sequences:
>Translated_427_residues MLNKKLSKILGPILGVMVFMTSLGVGQVKVLADDKVSETSVTCENTSYDKEEDYSFKINKSVEQNGFKITLDSAIATKNK LKILVKVESKESIDKEKADNLISIVTFGENFRDSSGYWNDYKDDKTFFININEESDEEEFLEKDSLRVDIVIPTYKINIG IDADVDFSKSFKESVKKKMNAKIPEFDFTVNNIESDIMGTTINYSGPWIENRFENDEPSDSPHSCIILQVGDKMYKAKRG GSSASKENGTNGKFVCESLNYDKFKESEKISIIPLVSYVSYDRLNELCKNEDRSEHYEKINNYKEIKDNVRYLKSFDFYD GSKGEIYNIERNDSTIKIYCKGNTEKAGLLMVTNMFIDYEVDVEKFNYENNYDGRKNMSFYKDPSDELGYVVEFNNVPKD KTMDMNFDFNISKIDKYEIGTEVELSK >Mature_427_residues MLNKKLSKILGPILGVMVFMTSLGVGQVKVLADDKVSETSVTCENTSYDKEEDYSFKINKSVEQNGFKITLDSAIATKNK LKILVKVESKESIDKEKADNLISIVTFGENFRDSSGYWNDYKDDKTFFININEESDEEEFLEKDSLRVDIVIPTYKINIG IDADVDFSKSFKESVKKKMNAKIPEFDFTVNNIESDIMGTTINYSGPWIENRFENDEPSDSPHSCIILQVGDKMYKAKRG GSSASKENGTNGKFVCESLNYDKFKESEKISIIPLVSYVSYDRLNELCKNEDRSEHYEKINNYKEIKDNVRYLKSFDFYD GSKGEIYNIERNDSTIKIYCKGNTEKAGLLMVTNMFIDYEVDVEKFNYENNYDGRKNMSFYKDPSDELGYVVEFNNVPKD KTMDMNFDFNISKIDKYEIGTEVELSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49139; Mature: 49139
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKKLSKILGPILGVMVFMTSLGVGQVKVLADDKVSETSVTCENTSYDKEEDYSFKINK CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEC SVEQNGFKITLDSAIATKNKLKILVKVESKESIDKEKADNLISIVTFGENFRDSSGYWND CCCCCCCEEEECHHHCCCCEEEEEEEECCCHHCCHHHHCCEEEEEEECCCCCCCCCCCCC YKDDKTFFININEESDEEEFLEKDSLRVDIVIPTYKINIGIDADVDFSKSFKESVKKKMN CCCCCEEEEEECCCCCHHHHHHCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHC AKIPEFDFTVNNIESDIMGTTINYSGPWIENRFENDEPSDSPHSCIILQVGDKMYKAKRG CCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCC GSSASKENGTNGKFVCESLNYDKFKESEKISIIPLVSYVSYDRLNELCKNEDRSEHYEKI CCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHH NNYKEIKDNVRYLKSFDFYDGSKGEIYNIERNDSTIKIYCKGNTEKAGLLMVTNMFIDYE HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEEEE VDVEKFNYENNYDGRKNMSFYKDPSDELGYVVEFNNVPKDKTMDMNFDFNISKIDKYEIG EEHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCEEEECC TEVELSK CEEEECC >Mature Secondary Structure MLNKKLSKILGPILGVMVFMTSLGVGQVKVLADDKVSETSVTCENTSYDKEEDYSFKINK CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEC SVEQNGFKITLDSAIATKNKLKILVKVESKESIDKEKADNLISIVTFGENFRDSSGYWND CCCCCCCEEEECHHHCCCCEEEEEEEECCCHHCCHHHHCCEEEEEEECCCCCCCCCCCCC YKDDKTFFININEESDEEEFLEKDSLRVDIVIPTYKINIGIDADVDFSKSFKESVKKKMN CCCCCEEEEEECCCCCHHHHHHCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHC AKIPEFDFTVNNIESDIMGTTINYSGPWIENRFENDEPSDSPHSCIILQVGDKMYKAKRG CCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCC GSSASKENGTNGKFVCESLNYDKFKESEKISIIPLVSYVSYDRLNELCKNEDRSEHYEKI CCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHH NNYKEIKDNVRYLKSFDFYDGSKGEIYNIERNDSTIKIYCKGNTEKAGLLMVTNMFIDYE HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEEEE VDVEKFNYENNYDGRKNMSFYKDPSDELGYVVEFNNVPKDKTMDMNFDFNISKIDKYEIG EEHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCEEEECC TEVELSK CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA