| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ykrP [H]
Identifier: 187933417
GI number: 187933417
Start: 1538677
End: 1539696
Strand: Reverse
Name: ykrP [H]
Synonym: CLL_A1486
Alternate gene names: 187933417
Gene position: 1539696-1538677 (Counterclockwise)
Preceding gene: 187932859
Following gene: 187932524
Centisome position: 40.51
GC content: 26.96
Gene sequence:
>1020_bases ATGGTAGAAACACATAGGAATTATTTAATTGATAATAGTAAAGGTATCTTAATTTTTCTGGTAGTCTTAGGACATAGCTT AGAGTTCTTACGAAAGGATTATGATATTGTTAGAATTATGTATACCTTTGTTTATCTTTTTCATATGCCAGTGTTTGTCT TTATATCAGGTTATCTTTCTAAAAATATAGAAAAAGGACGTAAAAACGCAGTAAAAACTTTATTTATACCATTTCTATTT TTTAATACAATATGGAATGTAGTTGAAATGTATTTGCAATATTTGCCAGGAAATAATGCAGGTGAAATTACAAATATAAC TCTATTCTCATTTTTTACTCCTGGTTGGGCATTATGGTATATATTTTCAATGTTCCTTTGGAAAATATTTTTACCAGATC TTTTAAAAATTAAAAATATATTTATAATCAGTATCATTGTAGGAATAGCTGCTAGACTTTTTAGTGAATTGGGTACATTT ATGGCACTTTCACGTACCCTTGCATTTACTCCATTCTTTCTAGCTGGATATTATACAAGTGAAAAAAAATTACATGAATT AAGAAAATTTGGACAAGTCCCATCTATACTAATTACTGGTATAGGAATTGCACTTGCCATCCTATTTGTTAAACTTTTTA ATATTCCAGGTGAATTTCTATGGGCTGATCGTTCATATAACCATTTTGAAATAGGTATTATAAAAAGTGTTATTCTTGCC ACTCTAAATTATGGAATTGGGTTTCTGTTTATATATGTATTTGCAAATTTAGTACCTAAAAAGGAAACTTTTTTATGCAA ATTGGGTAGAAATACTTTATCAGTGTATTTGCTACATACTTATTTCATTGGTGTTGTATTAGGAGTATGCTCTCTTATAC CAAGTGATATTGTTAAATTTATAATCATTATAATCGGTACTTTTATAATTACATTTTTACTTTCACGAGATGTTGTAGCT ATTAGATTTAATTGTTTCTTAAATGGTATTAATAAAAAAATATTTGCTGAAGAAAAATAA
Upstream 100 bases:
>100_bases TAAAGCAACACTATGTTTTAGTATAAATAGTATGAATTTAAAAATTATATTAATTAAAGTAAAAATATTATTATTTTAAT TAATAAAAGGGGTTAGTAAG
Downstream 100 bases:
>100_bases AAACATAAAATGGTGTTGCAGTTCATTTTGCAGCACCATCTTATGTTTAGTTATTAAAGATTATATTCTCTAGGTTGATT TCCAGAAAAGTATATGCTGA
Product: acyltransferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MVETHRNYLIDNSKGILIFLVVLGHSLEFLRKDYDIVRIMYTFVYLFHMPVFVFISGYLSKNIEKGRKNAVKTLFIPFLF FNTIWNVVEMYLQYLPGNNAGEITNITLFSFFTPGWALWYIFSMFLWKIFLPDLLKIKNIFIISIIVGIAARLFSELGTF MALSRTLAFTPFFLAGYYTSEKKLHELRKFGQVPSILITGIGIALAILFVKLFNIPGEFLWADRSYNHFEIGIIKSVILA TLNYGIGFLFIYVFANLVPKKETFLCKLGRNTLSVYLLHTYFIGVVLGVCSLIPSDIVKFIIIIIGTFIITFLLSRDVVA IRFNCFLNGINKKIFAEEK
Sequences:
>Translated_339_residues MVETHRNYLIDNSKGILIFLVVLGHSLEFLRKDYDIVRIMYTFVYLFHMPVFVFISGYLSKNIEKGRKNAVKTLFIPFLF FNTIWNVVEMYLQYLPGNNAGEITNITLFSFFTPGWALWYIFSMFLWKIFLPDLLKIKNIFIISIIVGIAARLFSELGTF MALSRTLAFTPFFLAGYYTSEKKLHELRKFGQVPSILITGIGIALAILFVKLFNIPGEFLWADRSYNHFEIGIIKSVILA TLNYGIGFLFIYVFANLVPKKETFLCKLGRNTLSVYLLHTYFIGVVLGVCSLIPSDIVKFIIIIIGTFIITFLLSRDVVA IRFNCFLNGINKKIFAEEK >Mature_339_residues MVETHRNYLIDNSKGILIFLVVLGHSLEFLRKDYDIVRIMYTFVYLFHMPVFVFISGYLSKNIEKGRKNAVKTLFIPFLF FNTIWNVVEMYLQYLPGNNAGEITNITLFSFFTPGWALWYIFSMFLWKIFLPDLLKIKNIFIISIIVGIAARLFSELGTF MALSRTLAFTPFFLAGYYTSEKKLHELRKFGQVPSILITGIGIALAILFVKLFNIPGEFLWADRSYNHFEIGIIKSVILA TLNYGIGFLFIYVFANLVPKKETFLCKLGRNTLSVYLLHTYFIGVVLGVCSLIPSDIVKFIIIIIGTFIITFLLSRDVVA IRFNCFLNGINKKIFAEEK
Specific function: Unknown
COG id: COG3594
COG function: function code G; Fucose 4-O-acetylase and related acetyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 39057; Mature: 39057
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVETHRNYLIDNSKGILIFLVVLGHSLEFLRKDYDIVRIMYTFVYLFHMPVFVFISGYLS CCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNIEKGRKNAVKTLFIPFLFFNTIWNVVEMYLQYLPGNNAGEITNITLFSFFTPGWALWY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHCCHHHHHH IFSMFLWKIFLPDLLKIKNIFIISIIVGIAARLFSELGTFMALSRTLAFTPFFLAGYYTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EKKLHELRKFGQVPSILITGIGIALAILFVKLFNIPGEFLWADRSYNHFEIGIIKSVILA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHH TLNYGIGFLFIYVFANLVPKKETFLCKLGRNTLSVYLLHTYFIGVVLGVCSLIPSDIVKF HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIIIIGTFIITFLLSRDVVAIRFNCFLNGINKKIFAEEK HHHHHHHHHHHHHHHCCHHEEEHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVETHRNYLIDNSKGILIFLVVLGHSLEFLRKDYDIVRIMYTFVYLFHMPVFVFISGYLS CCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNIEKGRKNAVKTLFIPFLFFNTIWNVVEMYLQYLPGNNAGEITNITLFSFFTPGWALWY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHCCHHHHHH IFSMFLWKIFLPDLLKIKNIFIISIIVGIAARLFSELGTFMALSRTLAFTPFFLAGYYTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EKKLHELRKFGQVPSILITGIGIALAILFVKLFNIPGEFLWADRSYNHFEIGIIKSVILA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHH TLNYGIGFLFIYVFANLVPKKETFLCKLGRNTLSVYLLHTYFIGVVLGVCSLIPSDIVKF HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIIIIGTFIITFLLSRDVVAIRFNCFLNGINKKIFAEEK HHHHHHHHHHHHHHHCCHHEEEHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]