BacMap

Definition	Clostridium botulinum B str. Eklund 17B, complete genome.
Accession	NC_010674
Length	3,800,327

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The map label for this gene is cshA [H]

Identifier: 187933251

GI number: 187933251

Start: 1527086

End: 1528189

Strand: Reverse

Name: cshA [H]

Synonym: CLL_A1477

Alternate gene names: 187933251

Gene position: 1528189-1527086 (Counterclockwise)

Preceding gene: 187932524

Following gene: 187933676

Centisome position: 40.21

GC content: 30.34

Gene sequence:

>1104_bases
ATGAACTTTAAATCTTTAGAAATAAATGAAAATATAGTTAACATACTAAATAAAAATGGAATTAAAACTCCAACTCCTAT
TCAAGAGGAAAGTATACCAAAAATTTTATTAGGTAAAGATGTTATCGGTGAAGCCAAAACTGGAACTGGAAAGACTCTTG
CCTTTCTTCTTCCTATTTTTCAAAATATCTCCCCTAATACTAATGGAACACAGGTGTTAATCCTATCACCTACTAGAGAA
TTAGCGATTCAAATAACAGAAGAAACAAAAAAACTTAATGTAAACAATGATATTAATATCTTAGCTGCCTATGGAGGTAA
GGATATTGGAAGTCAATTAAAAAAGCTTAAACACAATATCCATTTAGTTATTGCCACTCCTGGTAGACTACTCGATCATA
TTGAAAGAAAAACTATAGACTTATCAAAACTAAAAACTATAGTTATAGATGAAGCTGATCAAATGTTATTAATGGGCTTT
AAAAATGATATTGAAAAAATTATGAAAGCAGCTTCAAAAAAGCATCAAACACTTTGTTTTTCAGCTACTATGGATTCACA
AGTAAAAAAGCTTGCTTATAGATATATGATTGATCCATTATTTATAGACATAAAATCACCAACTATAGCTGTTGATAAAA
TCAAGCAACAAGTTGTAGAAACTACTGATAGATGGAAGCAAGATTCGCTTTGTGCTGCTTTACAAGAAGATAATCCATTT
ATGGCAATCATATTTTGTAGAACTAAACGTAGAGCTGATGTTCTTGAAATTGCTCTTCATCAAAAAGGCCTTAATTGTCA
AAAAATACATAGTGATGTTCCTCAAGCTAAACGTGAAAGAATAATGAAATCTTTTAGAAATGCTGATATTCAATACTTAA
TAGCAACAGATGTAGCTGCAAGAGGAATTGATATTTCTGGTGTTTCACATATTTACAACTATGATACTCCAGAAACTCCA
GAAAGTTATATTCATCGTATAGGAAGAACTGGCCGTGCTGGTGAAGATGGTTATACATGTATGTTCGTAGCACCAAAAGA
TTCATATCTTTTAAATGCAATAGAAAAAAAATTAGGTTTTACAATTCCTAGACGTGAAATTTAA

Upstream 100 bases:

>100_bases
ATTCTTAAAAACAATATACTAAGTCTACTGGTTTATTTTAGACTATTATTTTCTTGCATATGCATAATATTAAAATATAC
TGATTGAAAGGATAATAATT

Downstream 100 bases:

>100_bases
AAAGTTTTAATGAAAATAAATATATTTGGATCAGTCTAAAGTATAAATAAATATAAATACCATGCTTAAACTTTTAATCA
TGGTATTTATATTTATAAAA

Product: cold-shock deAd box protein a

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MNFKSLEINENIVNILNKNGIKTPTPIQEESIPKILLGKDVIGEAKTGTGKTLAFLLPIFQNISPNTNGTQVLILSPTRE
LAIQITEETKKLNVNNDINILAAYGGKDIGSQLKKLKHNIHLVIATPGRLLDHIERKTIDLSKLKTIVIDEADQMLLMGF
KNDIEKIMKAASKKHQTLCFSATMDSQVKKLAYRYMIDPLFIDIKSPTIAVDKIKQQVVETTDRWKQDSLCAALQEDNPF
MAIIFCRTKRRADVLEIALHQKGLNCQKIHSDVPQAKRERIMKSFRNADIQYLIATDVAARGIDISGVSHIYNYDTPETP
ESYIHRIGRTGRAGEDGYTCMFVAPKDSYLLNAIEKKLGFTIPRREI

Sequences:

>Translated_367_residues
MNFKSLEINENIVNILNKNGIKTPTPIQEESIPKILLGKDVIGEAKTGTGKTLAFLLPIFQNISPNTNGTQVLILSPTRE
LAIQITEETKKLNVNNDINILAAYGGKDIGSQLKKLKHNIHLVIATPGRLLDHIERKTIDLSKLKTIVIDEADQMLLMGF
KNDIEKIMKAASKKHQTLCFSATMDSQVKKLAYRYMIDPLFIDIKSPTIAVDKIKQQVVETTDRWKQDSLCAALQEDNPF
MAIIFCRTKRRADVLEIALHQKGLNCQKIHSDVPQAKRERIMKSFRNADIQYLIATDVAARGIDISGVSHIYNYDTPETP
ESYIHRIGRTGRAGEDGYTCMFVAPKDSYLLNAIEKKLGFTIPRREI
>Mature_367_residues
MNFKSLEINENIVNILNKNGIKTPTPIQEESIPKILLGKDVIGEAKTGTGKTLAFLLPIFQNISPNTNGTQVLILSPTRE
LAIQITEETKKLNVNNDINILAAYGGKDIGSQLKKLKHNIHLVIATPGRLLDHIERKTIDLSKLKTIVIDEADQMLLMGF
KNDIEKIMKAASKKHQTLCFSATMDSQVKKLAYRYMIDPLFIDIKSPTIAVDKIKQQVVETTDRWKQDSLCAALQEDNPF
MAIIFCRTKRRADVLEIALHQKGLNCQKIHSDVPQAKRERIMKSFRNADIQYLIATDVAARGIDISGVSHIYNYDTPETP
ESYIHRIGRTGRAGEDGYTCMFVAPKDSYLLNAIEKKLGFTIPRREI

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. In vitro, unwinds dsRNA in both 5'- and 3'- directions and shows RNA-dependent ATPase activity. Required for vegetative grow

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid. Associated with free 50S ribosomal subunit, 70S ribosome and polysomes [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=356, Percent_Identity=37.0786516853933, Blast_Score=256, Evalue=3e-68,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=37.6344086021505, Blast_Score=240, Evalue=1e-63,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=37.6344086021505, Blast_Score=240, Evalue=1e-63,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=37.5, Blast_Score=238, Evalue=5e-63,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=37.5, Blast_Score=238, Evalue=5e-63,
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=37.5, Blast_Score=238, Evalue=6e-63,
Organism=Homo sapiens, GI31542656, Length=365, Percent_Identity=36.7123287671233, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI50659095, Length=388, Percent_Identity=35.8247422680412, Blast_Score=231, Evalue=7e-61,
Organism=Homo sapiens, GI20149629, Length=365, Percent_Identity=37.2602739726027, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI41327773, Length=370, Percent_Identity=35.6756756756757, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI222352149, Length=362, Percent_Identity=37.0165745856354, Blast_Score=228, Evalue=5e-60,
Organism=Homo sapiens, GI13129006, Length=386, Percent_Identity=35.2331606217617, Blast_Score=228, Evalue=6e-60,
Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=35.4223433242507, Blast_Score=228, Evalue=7e-60,
Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=35.4223433242507, Blast_Score=228, Evalue=7e-60,
Organism=Homo sapiens, GI41327771, Length=385, Percent_Identity=36.6233766233766, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI224593278, Length=363, Percent_Identity=35.8126721763085, Blast_Score=225, Evalue=4e-59,
Organism=Homo sapiens, GI262118318, Length=373, Percent_Identity=33.7801608579088, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI262231852, Length=373, Percent_Identity=33.7801608579088, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI216548263, Length=373, Percent_Identity=33.7801608579088, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.9550561797753, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI13518015, Length=356, Percent_Identity=34.2696629213483, Blast_Score=221, Evalue=6e-58,
Organism=Homo sapiens, GI164664518, Length=344, Percent_Identity=34.0116279069767, Blast_Score=219, Evalue=2e-57,
Organism=Homo sapiens, GI55749865, Length=347, Percent_Identity=35.4466858789625, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI148613856, Length=354, Percent_Identity=35.3107344632768, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI38201710, Length=354, Percent_Identity=35.3107344632768, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI4758138, Length=356, Percent_Identity=33.9887640449438, Blast_Score=217, Evalue=1e-56,
Organism=Homo sapiens, GI83700235, Length=363, Percent_Identity=35.5371900826446, Blast_Score=215, Evalue=5e-56,
Organism=Homo sapiens, GI4503529, Length=327, Percent_Identity=34.8623853211009, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI188035877, Length=365, Percent_Identity=33.6986301369863, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI51094101, Length=363, Percent_Identity=33.3333333333333, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI164419743, Length=363, Percent_Identity=33.3333333333333, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI4758112, Length=365, Percent_Identity=29.8630136986301, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI18375623, Length=365, Percent_Identity=29.8630136986301, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI38327634, Length=363, Percent_Identity=34.9862258953168, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI13514831, Length=374, Percent_Identity=32.3529411764706, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI21040371, Length=361, Percent_Identity=29.6398891966759, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI41327776, Length=363, Percent_Identity=33.0578512396694, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI38569503, Length=363, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI38569505, Length=364, Percent_Identity=32.967032967033, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI164419732, Length=334, Percent_Identity=34.7305389221557, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI17505907, Length=412, Percent_Identity=30.0970873786408, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI8922886, Length=379, Percent_Identity=32.4538258575198, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI6005743, Length=379, Percent_Identity=32.4538258575198, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI62241022, Length=361, Percent_Identity=33.5180055401662, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI41327779, Length=373, Percent_Identity=30.8310991957105, Blast_Score=166, Evalue=2e-41,
Organism=Homo sapiens, GI62241024, Length=371, Percent_Identity=32.6145552560647, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI256223453, Length=353, Percent_Identity=30.5949008498584, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=27.6807980049875, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=30.6547619047619, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI154759257, Length=412, Percent_Identity=26.2135922330097, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI256773275, Length=396, Percent_Identity=27.2727272727273, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=34.5794392523364, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI9966805, Length=321, Percent_Identity=28.6604361370716, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI4557365, Length=342, Percent_Identity=25.7309941520468, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI51242943, Length=344, Percent_Identity=22.9651162790698, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI51242947, Length=344, Percent_Identity=22.9651162790698, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI148612816, Length=346, Percent_Identity=22.8323699421965, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI110735439, Length=352, Percent_Identity=23.8636363636364, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI169218196, Length=346, Percent_Identity=23.9884393063584, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87082221, Length=366, Percent_Identity=42.0765027322404, Blast_Score=305, Evalue=5e-84,
Organism=Escherichia coli, GI1787016, Length=370, Percent_Identity=38.6486486486486, Blast_Score=274, Evalue=6e-75,
Organism=Escherichia coli, GI1787605, Length=344, Percent_Identity=40.9883720930233, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1790214, Length=370, Percent_Identity=36.4864864864865, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1788930, Length=345, Percent_Identity=36.8115942028986, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI48994977, Length=359, Percent_Identity=24.7910863509749, Blast_Score=75, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI71987143, Length=355, Percent_Identity=38.3098591549296, Blast_Score=260, Evalue=1e-69,
Organism=Caenorhabditis elegans, GI71995724, Length=356, Percent_Identity=36.5168539325843, Blast_Score=247, Evalue=7e-66,
Organism=Caenorhabditis elegans, GI17507121, Length=357, Percent_Identity=36.1344537815126, Blast_Score=246, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17555296, Length=361, Percent_Identity=36.2880886426593, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI115532546, Length=367, Percent_Identity=37.6021798365123, Blast_Score=230, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=37.0572207084469, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=37.0572207084469, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI115532548, Length=367, Percent_Identity=37.6021798365123, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=37.0572207084469, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=35.6955380577428, Blast_Score=221, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17552114, Length=358, Percent_Identity=31.2849162011173, Blast_Score=220, Evalue=7e-58,
Organism=Caenorhabditis elegans, GI115533224, Length=331, Percent_Identity=38.0664652567976, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17510559, Length=389, Percent_Identity=33.1619537275064, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI86570094, Length=351, Percent_Identity=36.1823361823362, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI17537549, Length=361, Percent_Identity=36.2880886426593, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI17507945, Length=360, Percent_Identity=35.2777777777778, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=34.7826086956522, Blast_Score=204, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI71999646, Length=347, Percent_Identity=30.835734870317, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI71999644, Length=347, Percent_Identity=30.835734870317, Blast_Score=193, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17552642, Length=370, Percent_Identity=34.0540540540541, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI71982858, Length=367, Percent_Identity=28.8828337874659, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17509811, Length=378, Percent_Identity=31.2169312169312, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17507877, Length=381, Percent_Identity=34.6456692913386, Blast_Score=184, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17507879, Length=379, Percent_Identity=34.3007915567282, Blast_Score=180, Evalue=9e-46,
Organism=Caenorhabditis elegans, GI17505370, Length=351, Percent_Identity=33.6182336182336, Blast_Score=180, Evalue=9e-46,
Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=33.2439678284182, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17553716, Length=351, Percent_Identity=31.9088319088319, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71990816, Length=358, Percent_Identity=30.7262569832402, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17508543, Length=386, Percent_Identity=29.7927461139896, Blast_Score=167, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17536099, Length=394, Percent_Identity=32.741116751269, Blast_Score=166, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17536101, Length=394, Percent_Identity=32.741116751269, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17536103, Length=394, Percent_Identity=32.741116751269, Blast_Score=160, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI193206561, Length=336, Percent_Identity=29.4642857142857, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI193208216, Length=370, Percent_Identity=31.8918918918919, Blast_Score=150, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17507641, Length=384, Percent_Identity=27.8645833333333, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=28.494623655914, Blast_Score=130, Evalue=9e-31,
Organism=Caenorhabditis elegans, GI17556951, Length=349, Percent_Identity=29.512893982808, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI25148203, Length=422, Percent_Identity=26.5402843601896, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=210, Percent_Identity=30.4761904761905, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI71997889, Length=372, Percent_Identity=26.3440860215054, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=345, Percent_Identity=27.536231884058, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI25148205, Length=350, Percent_Identity=25.4285714285714, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=87, Percent_Identity=48.2758620689655, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17566630, Length=330, Percent_Identity=25.4545454545455, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI32564293, Length=357, Percent_Identity=24.6498599439776, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25145561, Length=362, Percent_Identity=23.2044198895028, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320224, Length=358, Percent_Identity=38.8268156424581, Blast_Score=252, Evalue=5e-68,
Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=38.0952380952381, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6324778, Length=354, Percent_Identity=36.4406779661017, Blast_Score=237, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=33.8888888888889, Blast_Score=236, Evalue=5e-63,
Organism=Saccharomyces cerevisiae, GI6325138, Length=362, Percent_Identity=36.1878453038674, Blast_Score=232, Evalue=6e-62,
Organism=Saccharomyces cerevisiae, GI6321360, Length=364, Percent_Identity=36.8131868131868, Blast_Score=217, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=36.2359550561798, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6321856, Length=346, Percent_Identity=37.5722543352601, Blast_Score=213, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6322912, Length=355, Percent_Identity=36.056338028169, Blast_Score=213, Evalue=5e-56,
Organism=Saccharomyces cerevisiae, GI6322323, Length=355, Percent_Identity=36.056338028169, Blast_Score=213, Evalue=5e-56,
Organism=Saccharomyces cerevisiae, GI6321963, Length=371, Percent_Identity=37.1967654986523, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6323947, Length=356, Percent_Identity=34.5505617977528, Blast_Score=194, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6320449, Length=364, Percent_Identity=35.1648351648352, Blast_Score=191, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=31.3390313390313, Blast_Score=182, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6322427, Length=360, Percent_Identity=32.7777777777778, Blast_Score=181, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6320400, Length=379, Percent_Identity=34.3007915567282, Blast_Score=180, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6319618, Length=396, Percent_Identity=32.8282828282828, Blast_Score=180, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6324620, Length=356, Percent_Identity=33.9887640449438, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6319714, Length=344, Percent_Identity=31.3953488372093, Blast_Score=173, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6321267, Length=361, Percent_Identity=34.9030470914127, Blast_Score=169, Evalue=7e-43,
Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=27.4271844660194, Blast_Score=145, Evalue=7e-36,
Organism=Saccharomyces cerevisiae, GI6320173, Length=237, Percent_Identity=29.535864978903, Blast_Score=134, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6321111, Length=363, Percent_Identity=27.5482093663912, Blast_Score=130, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6322876, Length=426, Percent_Identity=29.1079812206573, Blast_Score=129, Evalue=7e-31,
Organism=Saccharomyces cerevisiae, GI6324366, Length=346, Percent_Identity=29.1907514450867, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323844, Length=343, Percent_Identity=25.9475218658892, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24584399, Length=373, Percent_Identity=39.142091152815, Blast_Score=259, Evalue=1e-69,
Organism=Drosophila melanogaster, GI24645031, Length=356, Percent_Identity=37.6404494382022, Blast_Score=256, Evalue=2e-68,
Organism=Drosophila melanogaster, GI281361218, Length=352, Percent_Identity=35.5113636363636, Blast_Score=234, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24644481, Length=352, Percent_Identity=35.5113636363636, Blast_Score=234, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24644487, Length=352, Percent_Identity=35.5113636363636, Blast_Score=234, Evalue=6e-62,
Organism=Drosophila melanogaster, GI45551833, Length=352, Percent_Identity=35.5113636363636, Blast_Score=234, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24644485, Length=352, Percent_Identity=35.5113636363636, Blast_Score=234, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24644483, Length=352, Percent_Identity=35.5113636363636, Blast_Score=234, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24644479, Length=352, Percent_Identity=35.5113636363636, Blast_Score=234, Evalue=7e-62,
Organism=Drosophila melanogaster, GI24585582, Length=362, Percent_Identity=38.121546961326, Blast_Score=231, Evalue=4e-61,
Organism=Drosophila melanogaster, GI28574962, Length=344, Percent_Identity=36.6279069767442, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=36.2903225806452, Blast_Score=228, Evalue=7e-60,
Organism=Drosophila melanogaster, GI21355075, Length=341, Percent_Identity=39.0029325513196, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24583281, Length=360, Percent_Identity=32.7777777777778, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24583279, Length=360, Percent_Identity=32.7777777777778, Blast_Score=225, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24642151, Length=352, Percent_Identity=34.375, Blast_Score=222, Evalue=4e-58,
Organism=Drosophila melanogaster, GI24662330, Length=365, Percent_Identity=34.7945205479452, Blast_Score=221, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24584994, Length=375, Percent_Identity=37.0666666666667, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI21356161, Length=390, Percent_Identity=35.6410256410256, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.3932584269663, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=36.4640883977901, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=36.4640883977901, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=36.4640883977901, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=36.4640883977901, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=34.5205479452055, Blast_Score=212, Evalue=3e-55,
Organism=Drosophila melanogaster, GI17136814, Length=363, Percent_Identity=36.6391184573003, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI17647335, Length=368, Percent_Identity=32.8804347826087, Blast_Score=195, Evalue=5e-50,
Organism=Drosophila melanogaster, GI28575014, Length=357, Percent_Identity=32.4929971988796, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI281365720, Length=301, Percent_Identity=35.8803986710963, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI28571808, Length=362, Percent_Identity=32.3204419889503, Blast_Score=185, Evalue=4e-47,
Organism=Drosophila melanogaster, GI28571809, Length=362, Percent_Identity=32.3204419889503, Blast_Score=185, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24581954, Length=367, Percent_Identity=29.700272479564, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24581952, Length=367, Percent_Identity=29.700272479564, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24581956, Length=367, Percent_Identity=29.700272479564, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24666101, Length=368, Percent_Identity=33.9673913043478, Blast_Score=174, Evalue=8e-44,
Organism=Drosophila melanogaster, GI24642822, Length=386, Percent_Identity=31.0880829015544, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=29.7297297297297, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI20130173, Length=443, Percent_Identity=28.2167042889391, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24643725, Length=398, Percent_Identity=28.391959798995, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=30.6306306306306, Blast_Score=142, Evalue=2e-34,
Organism=Drosophila melanogaster, GI19920478, Length=336, Percent_Identity=26.1904761904762, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI18859659, Length=249, Percent_Identity=31.7269076305221, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI28571338, Length=249, Percent_Identity=31.7269076305221, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI17136666, Length=412, Percent_Identity=24.7572815533981, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24640164, Length=347, Percent_Identity=24.207492795389, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24664230, Length=333, Percent_Identity=21.6216216216216, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI62472181, Length=333, Percent_Identity=21.6216216216216, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 41315; Mature: 41315

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKSLEINENIVNILNKNGIKTPTPIQEESIPKILLGKDVIGEAKTGTGKTLAFLLPIF
CCCCCEECCHHHHHHHHCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
QNISPNTNGTQVLILSPTRELAIQITEETKKLNVNNDINILAAYGGKDIGSQLKKLKHNI
HCCCCCCCCCEEEEECCCHHEEEEEECHHHEECCCCCEEEEEECCCCHHHHHHHHHHCCE
HLVIATPGRLLDHIERKTIDLSKLKTIVIDEADQMLLMGFKNDIEKIMKAASKKHQTLCF
EEEEECCHHHHHHHHHHCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
SATMDSQVKKLAYRYMIDPLFIDIKSPTIAVDKIKQQVVETTDRWKQDSLCAALQEDNPF
ECHHHHHHHHHHHHHHHCEEEEEECCCEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCE
MAIIFCRTKRRADVLEIALHQKGLNCQKIHSDVPQAKRERIMKSFRNADIQYLIATDVAA
EEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECHHH
RGIDISGVSHIYNYDTPETPESYIHRIGRTGRAGEDGYTCMFVAPKDSYLLNAIEKKLGF
CCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
TIPRREI
CCCCCCC
>Mature Secondary Structure
MNFKSLEINENIVNILNKNGIKTPTPIQEESIPKILLGKDVIGEAKTGTGKTLAFLLPIF
CCCCCEECCHHHHHHHHCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
QNISPNTNGTQVLILSPTRELAIQITEETKKLNVNNDINILAAYGGKDIGSQLKKLKHNI
HCCCCCCCCCEEEEECCCHHEEEEEECHHHEECCCCCEEEEEECCCCHHHHHHHHHHCCE
HLVIATPGRLLDHIERKTIDLSKLKTIVIDEADQMLLMGFKNDIEKIMKAASKKHQTLCF
EEEEECCHHHHHHHHHHCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
SATMDSQVKKLAYRYMIDPLFIDIKSPTIAVDKIKQQVVETTDRWKQDSLCAALQEDNPF
ECHHHHHHHHHHHHHHHCEEEEEECCCEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCE
MAIIFCRTKRRADVLEIALHQKGLNCQKIHSDVPQAKRERIMKSFRNADIQYLIATDVAA
EEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECHHH
RGIDISGVSHIYNYDTPETPESYIHRIGRTGRAGEDGYTCMFVAPKDSYLLNAIEKKLGF
CCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
TIPRREI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]