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The map label for this gene is yobV [H]

Identifier: 187933247

GI number: 187933247

Start: 3567490

End: 3568386

Strand: Reverse

Name: yobV [H]

Synonym: CLL_A3386

Alternate gene names: 187933247

Gene position: 3568386-3567490 (Counterclockwise)

Preceding gene: 187933780

Following gene: 187934006

Centisome position: 93.9

GC content: 26.53

Gene sequence:

>897_bases
ATGAAAATAGATAGGTTATTTTCTATTGTAAATATATTAGTTAGTAAAAAGAGTGTTACTGCTGCAGAATTAGCAGAACA
ATTTAATGTATCTGTTAGAACTATATACAGAGATATTGAGATATTATCTACAAATGGTATACCAATTTGTTCAGCTCAGG
GTAAAGGTGGAGGGCTTTCTATTTTAGATAATTATTCTATAGATAAAACCATATTGTCTGATAGTGAGCAGAAACAAGTA
CTTATGGCATTACAAAGTGTAAATGCTACAGGACAGATAAATGTAGATGATTCTTTTTTTAAACTAAGAAGTTTATTTAG
GAAGAATGCAATTGATTGGATTGAAATTGATTTTTCAGGTTGGGAGCAAAGTAAAGAGGATAAAGAAAATTTTGAAATTA
TTAAAGATAGTATTATTAATTCAAAGGCAGTATATATTTCTTATTTTAGCAACAAAGGTGAGAGGTCAGAGCGTATTGTA
GAACCATATAAATTGATATTCAAGGGATATAATTGGTATATATATGGATATTGTAGAAAAAGAAAAGATATGCGATTTTT
TAAATTAACAAGAATAGAAAAAATAGAAATTTTAAAAGATACCTTTGTAAATACACCACCATTAAATATTAGTTATGATA
TGTCACCAAAGGAAGAATTAATTGAAGTGAAGCTTAAAGTACATATTTCCATGGCTTCAAGGGTTTATGATGAGTTTAAA
AATGGAAAAATAACTTTAAAAAATGATGAATTTTATATTATAGTAAATGTTCCAAAAACTAAATGGTTATATGATTATTT
TCTTGGTTTTGGAAACAGCCTTGAGATACTTGAACCATTAGGGATGAGAGAAGAGCTTAAGAAAAAAGTAGAAGAAATTA
TAAAAAAATATTTATAA

Upstream 100 bases:

>100_bases
TTATAAAAATTAAAGTAATATAGAAAATAGTCTGTATAACATTATGAATTTTAATGGTATAATTTGTATAAATAGATATA
TTTTTTAGTGAGGAAATTAA

Downstream 100 bases:

>100_bases
TATGACACATAGATGTCAAGTTATGTTTGTTAATATTTGATTATCAAAGAAAGAGAGGTAATCAAATATGAATTACGAGG
TTGTAAATTTAAAAGAAAAG

Product: DeoR-family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKIDRLFSIVNILVSKKSVTAAELAEQFNVSVRTIYRDIEILSTNGIPICSAQGKGGGLSILDNYSIDKTILSDSEQKQV
LMALQSVNATGQINVDDSFFKLRSLFRKNAIDWIEIDFSGWEQSKEDKENFEIIKDSIINSKAVYISYFSNKGERSERIV
EPYKLIFKGYNWYIYGYCRKRKDMRFFKLTRIEKIEILKDTFVNTPPLNISYDMSPKEELIEVKLKVHISMASRVYDEFK
NGKITLKNDEFYIIVNVPKTKWLYDYFLGFGNSLEILEPLGMREELKKKVEEIIKKYL

Sequences:

>Translated_298_residues
MKIDRLFSIVNILVSKKSVTAAELAEQFNVSVRTIYRDIEILSTNGIPICSAQGKGGGLSILDNYSIDKTILSDSEQKQV
LMALQSVNATGQINVDDSFFKLRSLFRKNAIDWIEIDFSGWEQSKEDKENFEIIKDSIINSKAVYISYFSNKGERSERIV
EPYKLIFKGYNWYIYGYCRKRKDMRFFKLTRIEKIEILKDTFVNTPPLNISYDMSPKEELIEVKLKVHISMASRVYDEFK
NGKITLKNDEFYIIVNVPKTKWLYDYFLGFGNSLEILEPLGMREELKKKVEEIIKKYL
>Mature_298_residues
MKIDRLFSIVNILVSKKSVTAAELAEQFNVSVRTIYRDIEILSTNGIPICSAQGKGGGLSILDNYSIDKTILSDSEQKQV
LMALQSVNATGQINVDDSFFKLRSLFRKNAIDWIEIDFSGWEQSKEDKENFEIIKDSIINSKAVYISYFSNKGERSERIV
EPYKLIFKGYNWYIYGYCRKRKDMRFFKLTRIEKIEILKDTFVNTPPLNISYDMSPKEELIEVKLKVHISMASRVYDEFK
NGKITLKNDEFYIIVNVPKTKWLYDYFLGFGNSLEILEPLGMREELKKKVEEIIKKYL

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 34759; Mature: 34759

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDRLFSIVNILVSKKSVTAAELAEQFNVSVRTIYRDIEILSTNGIPICSAQGKGGGLS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHEEEEEEEEECCCCEEEECCCCCCCEE
ILDNYSIDKTILSDSEQKQVLMALQSVNATGQINVDDSFFKLRSLFRKNAIDWIEIDFSG
EEECCCCCHHHHCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEECCC
WEQSKEDKENFEIIKDSIINSKAVYISYFSNKGERSERIVEPYKLIFKGYNWYIYGYCRK
CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEC
RKDMRFFKLTRIEKIEILKDTFVNTPPLNISYDMSPKEELIEVKLKVHISMASRVYDEFK
CCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHEEEEEEEEHHHHHHHHHHC
NGKITLKNDEFYIIVNVPKTKWLYDYFLGFGNSLEILEPLGMREELKKKVEEIIKKYL
CCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIDRLFSIVNILVSKKSVTAAELAEQFNVSVRTIYRDIEILSTNGIPICSAQGKGGGLS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHEEEEEEEEECCCCEEEECCCCCCCEE
ILDNYSIDKTILSDSEQKQVLMALQSVNATGQINVDDSFFKLRSLFRKNAIDWIEIDFSG
EEECCCCCHHHHCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEECCC
WEQSKEDKENFEIIKDSIINSKAVYISYFSNKGERSERIVEPYKLIFKGYNWYIYGYCRK
CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEC
RKDMRFFKLTRIEKIEILKDTFVNTPPLNISYDMSPKEELIEVKLKVHISMASRVYDEFK
CCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHEEEEEEEEHHHHHHHHHHC
NGKITLKNDEFYIIVNVPKTKWLYDYFLGFGNSLEILEPLGMREELKKKVEEIIKKYL
CCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]