| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is prsA [H]
Identifier: 187933209
GI number: 187933209
Start: 3562590
End: 3563333
Strand: Reverse
Name: prsA [H]
Synonym: CLL_A3378
Alternate gene names: 187933209
Gene position: 3563333-3562590 (Counterclockwise)
Preceding gene: 187932560
Following gene: 187935163
Centisome position: 93.76
GC content: 30.11
Gene sequence:
>744_bases ATGGAAAATAAGGTATTGGCAATTGTTGCCGGAAACGAAATCAAAGATAAAGACTTAGATACAGTACTAAATAGATATCC ACAAGAAAGAAGAGCTATGTTCCAAGGAGAACAAGGAAGAGAAGCATTATTAGAACAAGTGGTAGCTTTTGAATTAATGC GTAATTTTGGTAAGGAATTAAAAATAGATGAGACTGAAGAATATAAAAATTTAGTTGAAGGATTAGCAAAAGAGGCATTA ACTCAATTAGCAATCAATAAAGTATTAGCAGATGTTACAGTTACTGATGAAGATGTTAAAAAGTATTATGATGATAATTC AAGTATGTTTATAAATCCACCAACAGTTTCAGCAAAACATATTTTAGTTAAGACTGAAGAAGAAGCTACTTCTATAAAAG AAGAAATAGCAAATGGATTAGCATTTGAAGAAGCTGCTAAGAAATATTCAACTTGTCCATCTAAAGAACAAGGTGGAAGT TTAGGTAACTTTGGAAAAGGTTCTATGGTACCAGAATTTGAAAAAGTTGCTTTCGAATCAGAAGTTGGAAAAGTTAGTGA ACCAGTTAAGACTCAATTTGGTTATCACTTAATATTAGTAGAAGACAAAACTGAAAGCACAACTGTACCGTTTGATCAAG TTAAAGATGCTGTGTTAAAACAACTTATAAATGAAAGACAACAAAACAAATATTTAGAAATGATAAAACAATTATCAGAT AAATATGGTGTTGAAAGAAAATAG
Upstream 100 bases:
>100_bases ATAAATAATAATAATAAATTTTCTTTTTTTATTGTTAGTAGAGATATATATTGTTAAAATATAGAGGTATATAAAAAAAT AGCTAAAAAGGAGAATTAAC
Downstream 100 bases:
>100_bases TAATATTACTTATAATTAGTAACAGAAAAAAAGTGGTTTTATATAAAACCACTTTTTTTTATAAAATTTCTATAATGAAA ACTTTCGTATATCTACTTTT
Product: foldase protein PrsA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MENKVLAIVAGNEIKDKDLDTVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKELKIDETEEYKNLVEGLAKEAL TQLAINKVLADVTVTDEDVKKYYDDNSSMFINPPTVSAKHILVKTEEEATSIKEEIANGLAFEEAAKKYSTCPSKEQGGS LGNFGKGSMVPEFEKVAFESEVGKVSEPVKTQFGYHLILVEDKTESTTVPFDQVKDAVLKQLINERQQNKYLEMIKQLSD KYGVERK
Sequences:
>Translated_247_residues MENKVLAIVAGNEIKDKDLDTVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKELKIDETEEYKNLVEGLAKEAL TQLAINKVLADVTVTDEDVKKYYDDNSSMFINPPTVSAKHILVKTEEEATSIKEEIANGLAFEEAAKKYSTCPSKEQGGS LGNFGKGSMVPEFEKVAFESEVGKVSEPVKTQFGYHLILVEDKTESTTVPFDQVKDAVLKQLINERQQNKYLEMIKQLSD KYGVERK >Mature_247_residues MENKVLAIVAGNEIKDKDLDTVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKELKIDETEEYKNLVEGLAKEAL TQLAINKVLADVTVTDEDVKKYYDDNSSMFINPPTVSAKHILVKTEEEATSIKEEIANGLAFEEAAKKYSTCPSKEQGGS LGNFGKGSMVPEFEKVAFESEVGKVSEPVKTQFGYHLILVEDKTESTTVPFDQVKDAVLKQLINERQQNKYLEMIKQLSD KYGVERK
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
Organism=Escherichia coli, GI1790211, Length=86, Percent_Identity=51.1627906976744, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1786645, Length=148, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 27897; Mature: 27897
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKVLAIVAGNEIKDKDLDTVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKEL CCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC KIDETEEYKNLVEGLAKEALTQLAINKVLADVTVTDEDVKKYYDDNSSMFINPPTVSAKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCCCE ILVKTEEEATSIKEEIANGLAFEEAAKKYSTCPSKEQGGSLGNFGKGSMVPEFEKVAFES EEEECCHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHH EVGKVSEPVKTQFGYHLILVEDKTESTTVPFDQVKDAVLKQLINERQQNKYLEMIKQLSD HHHHHCCHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYGVERK HCCCCCC >Mature Secondary Structure MENKVLAIVAGNEIKDKDLDTVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKEL CCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC KIDETEEYKNLVEGLAKEALTQLAINKVLADVTVTDEDVKKYYDDNSSMFINPPTVSAKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCCCE ILVKTEEEATSIKEEIANGLAFEEAAKKYSTCPSKEQGGSLGNFGKGSMVPEFEKVAFES EEEECCHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHH EVGKVSEPVKTQFGYHLILVEDKTESTTVPFDQVKDAVLKQLINERQQNKYLEMIKQLSD HHHHHCCHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYGVERK HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]