Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
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Accession | NC_010674 |
Length | 3,800,327 |
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The map label for this gene is 187933166
Identifier: 187933166
GI number: 187933166
Start: 2254592
End: 2255299
Strand: Reverse
Name: 187933166
Synonym: CLL_A2169
Alternate gene names: NA
Gene position: 2255299-2254592 (Counterclockwise)
Preceding gene: 187933921
Following gene: 187935031
Centisome position: 59.34
GC content: 28.67
Gene sequence:
>708_bases ATGATAAAACAAAATTTAAAAATAGAAAATATACCTGCAATTTTATGGGGAAACAAATCAGATAAATTGTTTGTAGTAGT ACATGGTAATATGTCAAATAAGGCAGATGATGTAATTGTTGTATTTGCGGAAGAAGCAATAAAAGCAGGTTATCAAGTGC TTAGTTTTGATTTGCCTGAACATGGTGATCGTAAAGATGAAGCTTATGTTTGCAAAGTTCAAAACTGTGTTAAAGACCTT AATATTATTATGAAATATGCACAAGCATTATCAAATAATATAAGTGTATTTGCTTGTAGTATGGGAGCATATTTTAGTCT ACTAGCATATAGTAATGAACCTCTGAAACAATGTTTATTTCTCTCACCTGTGGTAAATATGGAACGCATAATAAATAATA TGATGACATGGTTCAATATAAGTGAAGAAATGTTAAAGACTAAACAAGAAATTAAAACGCCAATTGGTGAAACTTTATAT TGGGATTATTATTGCTATGTAAAAGATTATCCTATTGAATTATGGAGTAAACCAACATCAATTTTGTATGGATTACAAGA TAGTTTATGTGAGTTTGAGGTAGTGTCTGAATTTGCAAAACGTTTTAATTGTAATTTACAGGTTATGGAGAATGGAGAAC ACTATTTCCATACTGAAGAACAACTACAATTTTTTAAGCAGTGGGTTAAAAAAATGTTTATTAAATAA
Upstream 100 bases:
>100_bases TAGATTAGTAATTGGTGAAAATAATAATCTATAGATCTTCATAAACAATAGGCTACATAAGAATTAGATAGTCTTTAGAT TTTAGAAAGGAAAAAACATA
Downstream 100 bases:
>100_bases TAGGATATTTACAAACTATTGTGTTGTGATTAAATATGTATAAATATTTTAGAGGAAAGGAAAGATTAAATTTAGCTATG GATGATTTTGAAAGTATACT
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Superfamily Hydrolase
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MIKQNLKIENIPAILWGNKSDKLFVVVHGNMSNKADDVIVVFAEEAIKAGYQVLSFDLPEHGDRKDEAYVCKVQNCVKDL NIIMKYAQALSNNISVFACSMGAYFSLLAYSNEPLKQCLFLSPVVNMERIINNMMTWFNISEEMLKTKQEIKTPIGETLY WDYYCYVKDYPIELWSKPTSILYGLQDSLCEFEVVSEFAKRFNCNLQVMENGEHYFHTEEQLQFFKQWVKKMFIK
Sequences:
>Translated_235_residues MIKQNLKIENIPAILWGNKSDKLFVVVHGNMSNKADDVIVVFAEEAIKAGYQVLSFDLPEHGDRKDEAYVCKVQNCVKDL NIIMKYAQALSNNISVFACSMGAYFSLLAYSNEPLKQCLFLSPVVNMERIINNMMTWFNISEEMLKTKQEIKTPIGETLY WDYYCYVKDYPIELWSKPTSILYGLQDSLCEFEVVSEFAKRFNCNLQVMENGEHYFHTEEQLQFFKQWVKKMFIK >Mature_235_residues MIKQNLKIENIPAILWGNKSDKLFVVVHGNMSNKADDVIVVFAEEAIKAGYQVLSFDLPEHGDRKDEAYVCKVQNCVKDL NIIMKYAQALSNNISVFACSMGAYFSLLAYSNEPLKQCLFLSPVVNMERIINNMMTWFNISEEMLKTKQEIKTPIGETLY WDYYCYVKDYPIELWSKPTSILYGLQDSLCEFEVVSEFAKRFNCNLQVMENGEHYFHTEEQLQFFKQWVKKMFIK
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27450; Mature: 27450
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQNLKIENIPAILWGNKSDKLFVVVHGNMSNKADDVIVVFAEEAIKAGYQVLSFDLPE CCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEHHHHHCCCEEEEECCCC HGDRKDEAYVCKVQNCVKDLNIIMKYAQALSNNISVFACSMGAYFSLLAYSNEPLKQCLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCHHHHHHH LSPVVNMERIINNMMTWFNISEEMLKTKQEIKTPIGETLYWDYYCYVKDYPIELWSKPTS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCHHHHCCHHH ILYGLQDSLCEFEVVSEFAKRFNCNLQVMENGEHYFHTEEQLQFFKQWVKKMFIK HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKQNLKIENIPAILWGNKSDKLFVVVHGNMSNKADDVIVVFAEEAIKAGYQVLSFDLPE CCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEHHHHHCCCEEEEECCCC HGDRKDEAYVCKVQNCVKDLNIIMKYAQALSNNISVFACSMGAYFSLLAYSNEPLKQCLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCHHHHHHH LSPVVNMERIINNMMTWFNISEEMLKTKQEIKTPIGETLYWDYYCYVKDYPIELWSKPTS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCHHHHCCHHH ILYGLQDSLCEFEVVSEFAKRFNCNLQVMENGEHYFHTEEQLQFFKQWVKKMFIK HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA