| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187933043
Identifier: 187933043
GI number: 187933043
Start: 2280604
End: 2281644
Strand: Reverse
Name: 187933043
Synonym: CLL_A2196
Alternate gene names: NA
Gene position: 2281644-2280604 (Counterclockwise)
Preceding gene: 187932522
Following gene: 187934337
Centisome position: 60.04
GC content: 26.71
Gene sequence:
>1041_bases ATGAAAAATGATATATATGATATGTTGAATAAAGTTAATATAAATATTGATGATTATGAAAAAGAAGATTTTAATGACTT AGAGAAGAAAAAAATAAAATATAATTTAAAAAAATCAATCTCGAAAAAGAAACCTCTAAAGAGAGGAATGATAGCAGCAG TTGCTATTGTAGTGTTAACAATAGGGATGTTGGGAAGTGATATAGGAGTATCTGCACTATCAAAGGTTAGTTATATAATT AATAATGATATAGCTAGTTTTTTAGGAATAGAAAGAAACTTAGATGAATATAAAACTGTTATAAATAAATCAATAACAGA TAAAGGAATAACAGTTCAATTAAATGAAGTAATATTAGATGGAGATGAAATGACAGTTTCTTGTAATATAAGTTCTGACC AAAAATTAGAAGAAGATGAATCCAGTGTTCCTGATTGTAATATTTATATAAATGGAAAAGAAATGAGTACTGGAGCTGGT GGTGGAGCTGAAAAGATTGATGAATACACTTCACAATCAGTTATTACTTATGATTTAAATGAGGATGACTTAAGTGGAGA TTTAAATATAAAAATTGTATGTTCAAATGTAATGTTGGCTCATAGAATGCAGAAAGGAAAGTGGGATTTTGAGTTTAAAA CCAATGGTGATCAATTAAGAATAGATACTAAGGAAATTCCACTTAATAATAAATTCACTCTAGAAAATGGTCAAGAATAT ACATTAGAAAAATATACGGATAATTCACTTGGACAAAAGATTTATGCTTCAATAAATACACCTAAAACAAAGTCTACCTA TGCTGTTGATTTAAAAGGAAATGACGATTTAGGGAATAAAGTAGAGTTTTATTTATCTTATGGTGATAAAAATTCAGGGT TATTTAAGATAGAAAATATTCATGGAAACCTTAATGAAAATGCAAAATTATTAAAATTAACTCCATATGCAGCTAAATAT CCAGAAAAGAGTGGAAAGATGGATGGTGAATACAAACAAGTAGGAGAAGAATTTACAGTAGATTTATCTAAATTAAAATA A
Upstream 100 bases:
>100_bases GAAATGGGAATTAAACGAGAAATTATATATAACAGATTATCAAGAGGGAAGAAAAGAATTCAAAAAATATTTAAGACATT AGAAAGTAGAGGGTAGAGAT
Downstream 100 bases:
>100_bases AAAGAAATAGTAAGTATCAAAAAGGCTAGTTACAAATTACAAGTAACTAGCCTTTAGTGTCATTTTATACTGTATAAATT TTATAATTATCATTAGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKNDIYDMLNKVNINIDDYEKEDFNDLEKKKIKYNLKKSISKKKPLKRGMIAAVAIVVLTIGMLGSDIGVSALSKVSYII NNDIASFLGIERNLDEYKTVINKSITDKGITVQLNEVILDGDEMTVSCNISSDQKLEEDESSVPDCNIYINGKEMSTGAG GGAEKIDEYTSQSVITYDLNEDDLSGDLNIKIVCSNVMLAHRMQKGKWDFEFKTNGDQLRIDTKEIPLNNKFTLENGQEY TLEKYTDNSLGQKIYASINTPKTKSTYAVDLKGNDDLGNKVEFYLSYGDKNSGLFKIENIHGNLNENAKLLKLTPYAAKY PEKSGKMDGEYKQVGEEFTVDLSKLK
Sequences:
>Translated_346_residues MKNDIYDMLNKVNINIDDYEKEDFNDLEKKKIKYNLKKSISKKKPLKRGMIAAVAIVVLTIGMLGSDIGVSALSKVSYII NNDIASFLGIERNLDEYKTVINKSITDKGITVQLNEVILDGDEMTVSCNISSDQKLEEDESSVPDCNIYINGKEMSTGAG GGAEKIDEYTSQSVITYDLNEDDLSGDLNIKIVCSNVMLAHRMQKGKWDFEFKTNGDQLRIDTKEIPLNNKFTLENGQEY TLEKYTDNSLGQKIYASINTPKTKSTYAVDLKGNDDLGNKVEFYLSYGDKNSGLFKIENIHGNLNENAKLLKLTPYAAKY PEKSGKMDGEYKQVGEEFTVDLSKLK >Mature_346_residues MKNDIYDMLNKVNINIDDYEKEDFNDLEKKKIKYNLKKSISKKKPLKRGMIAAVAIVVLTIGMLGSDIGVSALSKVSYII NNDIASFLGIERNLDEYKTVINKSITDKGITVQLNEVILDGDEMTVSCNISSDQKLEEDESSVPDCNIYINGKEMSTGAG GGAEKIDEYTSQSVITYDLNEDDLSGDLNIKIVCSNVMLAHRMQKGKWDFEFKTNGDQLRIDTKEIPLNNKFTLENGQEY TLEKYTDNSLGQKIYASINTPKTKSTYAVDLKGNDDLGNKVEFYLSYGDKNSGLFKIENIHGNLNENAKLLKLTPYAAKY PEKSGKMDGEYKQVGEEFTVDLSKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38803; Mature: 38803
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDIYDMLNKVNINIDDYEKEDFNDLEKKKIKYNLKKSISKKKPLKRGMIAAVAIVVLT CCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IGMLGSDIGVSALSKVSYIINNDIASFLGIERNLDEYKTVINKSITDKGITVQLNEVILD HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEC GDEMTVSCNISSDQKLEEDESSVPDCNIYINGKEMSTGAGGGAEKIDEYTSQSVITYDLN CCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCHHHHHHHCCCEEEEEECC EDDLSGDLNIKIVCSNVMLAHRMQKGKWDFEFKTNGDQLRIDTKEIPLNNKFTLENGQEY CCCCCCCEEEEEEECCHHHHHHHHCCCEEEEEECCCCEEEEEHHCCCCCCEEEECCCCEE TLEKYTDNSLGQKIYASINTPKTKSTYAVDLKGNDDLGNKVEFYLSYGDKNSGLFKIENI EEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEC HGNLNENAKLLKLTPYAAKYPEKSGKMDGEYKQVGEEFTVDLSKLK CCCCCCCCEEEEECCCHHHCCCCCCCCCCHHHHCCHHHEEEHHHCC >Mature Secondary Structure MKNDIYDMLNKVNINIDDYEKEDFNDLEKKKIKYNLKKSISKKKPLKRGMIAAVAIVVLT CCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IGMLGSDIGVSALSKVSYIINNDIASFLGIERNLDEYKTVINKSITDKGITVQLNEVILD HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEC GDEMTVSCNISSDQKLEEDESSVPDCNIYINGKEMSTGAGGGAEKIDEYTSQSVITYDLN CCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCHHHHHHHCCCEEEEEECC EDDLSGDLNIKIVCSNVMLAHRMQKGKWDFEFKTNGDQLRIDTKEIPLNNKFTLENGQEY CCCCCCCEEEEEEECCHHHHHHHHCCCEEEEEECCCCEEEEEHHCCCCCCEEEECCCCEE TLEKYTDNSLGQKIYASINTPKTKSTYAVDLKGNDDLGNKVEFYLSYGDKNSGLFKIENI EEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEEEEEC HGNLNENAKLLKLTPYAAKYPEKSGKMDGEYKQVGEEFTVDLSKLK CCCCCCCCEEEEECCCHHHCCCCCCCCCCHHHHCCHHHEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA