| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is mutL
Identifier: 187932933
GI number: 187932933
Start: 1900776
End: 1902794
Strand: Reverse
Name: mutL
Synonym: CLL_A1818
Alternate gene names: 187932933
Gene position: 1902794-1900776 (Counterclockwise)
Preceding gene: 187933880
Following gene: 187935269
Centisome position: 50.07
GC content: 27.19
Gene sequence:
>2019_bases ATGAAAAGAATTAATATATTAAATGAAGATACAGCTAATAAAATTGCAGCAGGTGAAGTAGTAGAAAGACCAGCATCAGT AGTAAAGGAATTAGTTGAAAATGCTATAGATGCAAATTCTAAAAATATATTAATAGAAATAGAAGAGGGTGGAAGTTCTT TAATAAGAATTATTGATGATGGAGATGGGATTTACAAAGAAGATATAGAGAAAGCCTTTTTACCTCATGCCACAAGTAAG ATAAAAGAGTCTGAAGATATATATAGTATTAACACATTAGGTTTTAGGGGAGAAGCTCTTCCATCTATTGCATCAGTAGC TAGAGTTAATTTGAAAACAAAACAAGAAACTGAAGAATGTGGATATGAAATTACAATAGAAGGTGGAAAATTTTCAGAAG TTACAGAATGTGGGGTTAATAAAGGAACTATAATGGAAGTAAGAGATTTATTTTTCAATGTTCCAGCAAGAAAAAAGTTC CTTAAAACAACTTCTAAAGAATCTTCTTTAATTAATGATATCATAACTAGAATAGCTTTATCTAACCCTAATATTAGTTT TAAACTATTTAATAATGGGAAAAAAATTATTCATACGTATGGCAATGGCAATATGAAAGATGTTATAAGAACTATCTATG GTAAAAGTATAGTTGAAAATGTGTTATATTTTGAAGATACATCTGATATCGCTACTATTTATGGGTATGTAGGGAAAGAG GCAATTGCTAGAGGTTCTAGAAATAATCAAAGTATTTTTGTAAATAGCAGATATATAAAGAATAGAAGTTTAGGAATTGC AGTAGAGCAAGCATTTAAATCATTTTCTACTGTAAGTAAGTTTCCTTTCTTTATATTATTTATAGAAATATATCCTGAAT ATATAGATGTGAATATTCACCCAACTAAATCAGAAGTAAAATTCAATGATGAACGTTTCATTTTTAAAAAGATATTTGGT GCTGTTCATACATCTTTAAAGGAAGAAGTTTTTAGTACATTTTCAATACCTGAAGAAGTAAATGAAGCTATTAGTAAGAA TACTAACTTAAATATTGAAGAAATAACTTTTAAAATTGAAGAAGAACAAGAAAAAGTTAAGTTTAATACTAATCATTTGT CACAAAAGAACATATGTTCTACACAAGGGAATAATAGCATAAATAAGCATATTTATGATGAAAAACACAAAACAGACACT AATATTCCTTTAAATGTTAATATTCCAGTTGATTTAAAAAGTGATCACATTAAATTAGAAGATGATAATAATAGTATTCC TAATAAAGAAGTAATTTGTGACAATAATGAAGTTAAGTATGAAAGTTCTTATACATCTGACTCTAATCAGTATGAAAATA GCTGTAAAAGTGATGTGGATAAGGAAAGTAAATCAAAAACAACAGGAACATCAGAATTAGTAAAAGAAAAAATTCCAAAG TTCCCTGCTATAAAAATTATTGGTCAATATAATAAAACTTATATATTAGGAGAATATGCAGGAACTCTTTATATGATAGA TCAACACGCAGCTCATGAAAAAATAATGTTTGAAAAGTATTTAAATGATATAATTTGTGGAGATATAATAATACAGCCAC TTATGATACCAACAGTAATTGATTTAAGCATGGATGATTACTCGTATTTTGAAGAAAACAAAGATGTATTTAAAGAAGCC GGGTTTACTATTGAAGATTTCGGTGGCACATCTATAGCATTAAAAGAAGTTCCATACTTTTTAGGTAAACTAAAACCTAA AAATCTATTTTTAGAAATATTAGATAATCTTAAAAATTTAGGATCAGGTAAAACTACTGAAGTTAAATATAATGCTATAG CAACTAAAGCATGCAAATCAGCAGTAAAAGGAAACGATTCTTTAGATGAATTAGAAATGGTTAAGTTAATAGAAGAGTTA AGATATATAGACGATCCATTCCATTGTCCTCATGGAAGACCAACCATTATTCAATTTACTAGTACAGATATAGATAAAAA ATTTAGGAGGATTGTTTAA
Upstream 100 bases:
>100_bases TGAAGAAACTTATAAACAGAAATTAAATATCTAAATATACATACAATATGTTATGTTAGATTTACTTATAAAGTAGAGAC TTACAAAGGGGGTGCACAAT
Downstream 100 bases:
>100_bases TAATGAAACAAAAGATTTTAGTTCTTGGAGGTCCTACAGCTGTTGGGAAAACAGAACTTTCAATAAAACTTGCTGAAAAA TTAAACGGGGAGATACTATC
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MKRINILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDDGDGIYKEDIEKAFLPHATSK IKESEDIYSINTLGFRGEALPSIASVARVNLKTKQETEECGYEITIEGGKFSEVTECGVNKGTIMEVRDLFFNVPARKKF LKTTSKESSLINDIITRIALSNPNISFKLFNNGKKIIHTYGNGNMKDVIRTIYGKSIVENVLYFEDTSDIATIYGYVGKE AIARGSRNNQSIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPTKSEVKFNDERFIFKKIFG AVHTSLKEEVFSTFSIPEEVNEAISKNTNLNIEEITFKIEEEQEKVKFNTNHLSQKNICSTQGNNSINKHIYDEKHKTDT NIPLNVNIPVDLKSDHIKLEDDNNSIPNKEVICDNNEVKYESSYTSDSNQYENSCKSDVDKESKSKTTGTSELVKEKIPK FPAIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDIICGDIIIQPLMIPTVIDLSMDDYSYFEENKDVFKEA GFTIEDFGGTSIALKEVPYFLGKLKPKNLFLEILDNLKNLGSGKTTEVKYNAIATKACKSAVKGNDSLDELEMVKLIEEL RYIDDPFHCPHGRPTIIQFTSTDIDKKFRRIV
Sequences:
>Translated_672_residues MKRINILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDDGDGIYKEDIEKAFLPHATSK IKESEDIYSINTLGFRGEALPSIASVARVNLKTKQETEECGYEITIEGGKFSEVTECGVNKGTIMEVRDLFFNVPARKKF LKTTSKESSLINDIITRIALSNPNISFKLFNNGKKIIHTYGNGNMKDVIRTIYGKSIVENVLYFEDTSDIATIYGYVGKE AIARGSRNNQSIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPTKSEVKFNDERFIFKKIFG AVHTSLKEEVFSTFSIPEEVNEAISKNTNLNIEEITFKIEEEQEKVKFNTNHLSQKNICSTQGNNSINKHIYDEKHKTDT NIPLNVNIPVDLKSDHIKLEDDNNSIPNKEVICDNNEVKYESSYTSDSNQYENSCKSDVDKESKSKTTGTSELVKEKIPK FPAIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDIICGDIIIQPLMIPTVIDLSMDDYSYFEENKDVFKEA GFTIEDFGGTSIALKEVPYFLGKLKPKNLFLEILDNLKNLGSGKTTEVKYNAIATKACKSAVKGNDSLDELEMVKLIEEL RYIDDPFHCPHGRPTIIQFTSTDIDKKFRRIV >Mature_672_residues MKRINILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDDGDGIYKEDIEKAFLPHATSK IKESEDIYSINTLGFRGEALPSIASVARVNLKTKQETEECGYEITIEGGKFSEVTECGVNKGTIMEVRDLFFNVPARKKF LKTTSKESSLINDIITRIALSNPNISFKLFNNGKKIIHTYGNGNMKDVIRTIYGKSIVENVLYFEDTSDIATIYGYVGKE AIARGSRNNQSIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPTKSEVKFNDERFIFKKIFG AVHTSLKEEVFSTFSIPEEVNEAISKNTNLNIEEITFKIEEEQEKVKFNTNHLSQKNICSTQGNNSINKHIYDEKHKTDT NIPLNVNIPVDLKSDHIKLEDDNNSIPNKEVICDNNEVKYESSYTSDSNQYENSCKSDVDKESKSKTTGTSELVKEKIPK FPAIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDIICGDIIIQPLMIPTVIDLSMDDYSYFEENKDVFKEA GFTIEDFGGTSIALKEVPYFLGKLKPKNLFLEILDNLKNLGSGKTTEVKYNAIATKACKSAVKGNDSLDELEMVKLIEEL RYIDDPFHCPHGRPTIIQFTSTDIDKKFRRIV
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=335, Percent_Identity=36.4179104477612, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI310128478, Length=341, Percent_Identity=26.099706744868, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI4505913, Length=341, Percent_Identity=26.099706744868, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI263191589, Length=241, Percent_Identity=31.5352697095436, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI4505911, Length=319, Percent_Identity=26.6457680250784, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI189458898, Length=319, Percent_Identity=26.6457680250784, Blast_Score=120, Evalue=5e-27, Organism=Homo sapiens, GI310128480, Length=292, Percent_Identity=24.6575342465753, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI189458896, Length=317, Percent_Identity=26.1829652996845, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI91992162, Length=355, Percent_Identity=24.2253521126761, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI91992160, Length=355, Percent_Identity=24.2253521126761, Blast_Score=87, Evalue=6e-17, Organism=Escherichia coli, GI1790612, Length=357, Percent_Identity=38.0952380952381, Blast_Score=238, Evalue=1e-63, Organism=Caenorhabditis elegans, GI71991825, Length=341, Percent_Identity=33.4310850439883, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17562796, Length=467, Percent_Identity=24.1970021413276, Blast_Score=127, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323819, Length=331, Percent_Identity=34.7432024169184, Blast_Score=190, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6324247, Length=348, Percent_Identity=31.0344827586207, Blast_Score=140, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6325093, Length=744, Percent_Identity=21.9086021505376, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6323063, Length=365, Percent_Identity=24.6575342465753, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI17136968, Length=312, Percent_Identity=34.2948717948718, Blast_Score=209, Evalue=7e-54, Organism=Drosophila melanogaster, GI17136970, Length=357, Percent_Identity=24.6498599439776, Blast_Score=123, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_CLOBB (B2TIB8)
Other databases:
- EMBL: CP001056 - RefSeq: YP_001886011.1 - GeneID: 6294544 - GenomeReviews: CP001056_GR - KEGG: cbk:CLL_A1818 - HOGENOM: HBG520262 - OMA: FLFINNR - ProtClustDB: PRK00095 - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 76092; Mature: 76092
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRINILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEC GDGIYKEDIEKAFLPHATSKIKESEDIYSINTLGFRGEALPSIASVARVNLKTKQETEEC CCCCCHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHC GYEITIEGGKFSEVTECGVNKGTIMEVRDLFFNVPARKKFLKTTSKESSLINDIITRIAL CEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHEE SNPNISFKLFNNGKKIIHTYGNGNMKDVIRTIYGKSIVENVLYFEDTSDIATIYGYVGKE CCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH AIARGSRNNQSIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIH HHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCHHEEEEEEECCCCEEEEEC PTKSEVKFNDERFIFKKIFGAVHTSLKEEVFSTFSIPEEVNEAISKNTNLNIEEITFKIE CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEE EEQEKVKFNTNHLSQKNICSTQGNNSINKHIYDEKHKTDTNIPLNVNIPVDLKSDHIKLE CCCHHEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECEEECCCEEEEE DDNNSIPNKEVICDNNEVKYESSYTSDSNQYENSCKSDVDKESKSKTTGTSELVKEKIPK CCCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHCCC FPAIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDIICGDIIIQPLMIPTVI CCEEEEEECCCCEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE DLSMDDYSYFEENKDVFKEAGFTIEDFGGTSIALKEVPYFLGKLKPKNLFLEILDNLKNL ECCCCCHHHHHCCHHHHHHCCCEEEECCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHC GSGKTTEVKYNAIATKACKSAVKGNDSLDELEMVKLIEELRYIDDPFHCPHGRPTIIQFT CCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE STDIDKKFRRIV CCCHHHHHHHCC >Mature Secondary Structure MKRINILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEC GDGIYKEDIEKAFLPHATSKIKESEDIYSINTLGFRGEALPSIASVARVNLKTKQETEEC CCCCCHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHC GYEITIEGGKFSEVTECGVNKGTIMEVRDLFFNVPARKKFLKTTSKESSLINDIITRIAL CEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHEE SNPNISFKLFNNGKKIIHTYGNGNMKDVIRTIYGKSIVENVLYFEDTSDIATIYGYVGKE CCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH AIARGSRNNQSIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIH HHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCHHEEEEEEECCCCEEEEEC PTKSEVKFNDERFIFKKIFGAVHTSLKEEVFSTFSIPEEVNEAISKNTNLNIEEITFKIE CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEE EEQEKVKFNTNHLSQKNICSTQGNNSINKHIYDEKHKTDTNIPLNVNIPVDLKSDHIKLE CCCHHEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECEEECCCEEEEE DDNNSIPNKEVICDNNEVKYESSYTSDSNQYENSCKSDVDKESKSKTTGTSELVKEKIPK CCCCCCCCCCEEECCCCEEEECCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHCCC FPAIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDIICGDIIIQPLMIPTVI CCEEEEEECCCCEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE DLSMDDYSYFEENKDVFKEAGFTIEDFGGTSIALKEVPYFLGKLKPKNLFLEILDNLKNL ECCCCCHHHHHCCHHHHHHCCCEEEECCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHC GSGKTTEVKYNAIATKACKSAVKGNDSLDELEMVKLIEELRYIDDPFHCPHGRPTIIQFT CCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE STDIDKKFRRIV CCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA