| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932808
Identifier: 187932808
GI number: 187932808
Start: 2829664
End: 2830683
Strand: Reverse
Name: 187932808
Synonym: CLL_A2721
Alternate gene names: NA
Gene position: 2830683-2829664 (Counterclockwise)
Preceding gene: 187934436
Following gene: 187935574
Centisome position: 74.49
GC content: 27.35
Gene sequence:
>1020_bases GTGATATTTATAGAATTAGTTTTAAAAAATAAATATAAAATACAATTACTTTCTGAAGAAACTACTTTAAAAGAAAGTAT AGATAGTATTGCATATACTTTAAATTTATCTTTAATAGAAACTGATGAATTAAAAAACATAGGACTAGTTAAAGGCGATA GTATTCAACTTTATGACTATATGTTTAATAGTAATGAATATAAAAAAATATTTGATGGTACTGTTAGAGATATAAATAGT TCAAAGAAAAATAAAAAGCTATCTATTGTTTGTAGAGAAAGAACTATAACAATAGAAGAAAGCGAAGATGAATATTTATG GAAAGATGGTCAAACAGTCACTCAAAGAACTAAAATAATATGCAAAGATTGGAGTATACCAGTAGGAAATTTTGCAGAGA TAAATATAGGTTTATCAAAGGACATGAGAAAAGAATCTCTATTTGGTATGTTGAAAAAGGATTTAAAAGAAACAGCTCAA AAGGGTGGGAGTCTTTATAAATTTAGAATGTCAGAAAGTTTAGATTTAGTTGAGCTAGGAAGTAATAGTGTAGCTTATAA ATTAGATAATATTGTAGATGATATACAAAACAAAAGCACTCTTTCAGGAGCCATTACACAAGTAAAAGTTTTAGGTAAAG AAGAAACAAAGAAAAGCACTGAGAAAAATAAGACTTCTAGCAGCAGTGAAGAAAAAGAATTAATATTATCTCCTATAATT GGTGTATTTAAAAAAGATACAGAGAGATATGGAACTATACAAAAGCTGTTTCAAGATGAAAAAATTGACGATTATTCAAA AGCTAAAAGTAAAGCTGATACATTATTTAGTAGTGGCGAAGATAGTATATCTGTACCGTGTATTAAAGATATAAATACTA TACGAGCAGGAGATAAAGTAAGTTTGTACAATACTTTTTATTATGTTACAGATATAACGCACGAGTTAGGCACAGGTGGA AAAATGGATTTAACACTAATGAACTGGGAAGGAGTGAAATCTAAGTTTTATGGAGAATAA
Upstream 100 bases:
>100_bases GTAACGGCTTATAGAGTTGAAGGACAATGGCTACATACTTATTACGGTGACCATGGTGGTTATGTTCATATGGATTATAT AGTAAAAGTTTAAAAAGTAG
Downstream 100 bases:
>100_bases TATTTTTGAAGATATAAAAAGAGTAATGGATAATAATTTTAAAAGTGGTATTAATGAAGCTATGTTTTCTAATAGTCTAG TATTAGGTACAATAACTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MIFIELVLKNKYKIQLLSEETTLKESIDSIAYTLNLSLIETDELKNIGLVKGDSIQLYDYMFNSNEYKKIFDGTVRDINS SKKNKKLSIVCRERTITIEESEDEYLWKDGQTVTQRTKIICKDWSIPVGNFAEINIGLSKDMRKESLFGMLKKDLKETAQ KGGSLYKFRMSESLDLVELGSNSVAYKLDNIVDDIQNKSTLSGAITQVKVLGKEETKKSTEKNKTSSSSEEKELILSPII GVFKKDTERYGTIQKLFQDEKIDDYSKAKSKADTLFSSGEDSISVPCIKDINTIRAGDKVSLYNTFYYVTDITHELGTGG KMDLTLMNWEGVKSKFYGE
Sequences:
>Translated_339_residues MIFIELVLKNKYKIQLLSEETTLKESIDSIAYTLNLSLIETDELKNIGLVKGDSIQLYDYMFNSNEYKKIFDGTVRDINS SKKNKKLSIVCRERTITIEESEDEYLWKDGQTVTQRTKIICKDWSIPVGNFAEINIGLSKDMRKESLFGMLKKDLKETAQ KGGSLYKFRMSESLDLVELGSNSVAYKLDNIVDDIQNKSTLSGAITQVKVLGKEETKKSTEKNKTSSSSEEKELILSPII GVFKKDTERYGTIQKLFQDEKIDDYSKAKSKADTLFSSGEDSISVPCIKDINTIRAGDKVSLYNTFYYVTDITHELGTGG KMDLTLMNWEGVKSKFYGE >Mature_339_residues MIFIELVLKNKYKIQLLSEETTLKESIDSIAYTLNLSLIETDELKNIGLVKGDSIQLYDYMFNSNEYKKIFDGTVRDINS SKKNKKLSIVCRERTITIEESEDEYLWKDGQTVTQRTKIICKDWSIPVGNFAEINIGLSKDMRKESLFGMLKKDLKETAQ KGGSLYKFRMSESLDLVELGSNSVAYKLDNIVDDIQNKSTLSGAITQVKVLGKEETKKSTEKNKTSSSSEEKELILSPII GVFKKDTERYGTIQKLFQDEKIDDYSKAKSKADTLFSSGEDSISVPCIKDINTIRAGDKVSLYNTFYYVTDITHELGTGG KMDLTLMNWEGVKSKFYGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38468; Mature: 38468
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFIELVLKNKYKIQLLSEETTLKESIDSIAYTLNLSLIETDELKNIGLVKGDSIQLYDY CEEEEEEECCCEEEEEECCHHHHHHHHHHEEEEEEEEEEECCCCCCCCEEECCCEEEEEE MFNSNEYKKIFDGTVRDINSSKKNKKLSIVCRERTITIEESEDEYLWKDGQTVTQRTKII EECCCCHHHHHCCHHHHCCCCCCCCEEEEEEEEEEEEEECCCCCEEECCCCCHHHHHEEE CKDWSIPVGNFAEINIGLSKDMRKESLFGMLKKDLKETAQKGGSLYKFRMSESLDLVELG EECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEC SNSVAYKLDNIVDDIQNKSTLSGAITQVKVLGKEETKKSTEKNKTSSSSEEKELILSPII CCCEEEEHHHHHHHHCCCHHHHHHHHEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHH GVFKKDTERYGTIQKLFQDEKIDDYSKAKSKADTLFSSGEDSISVPCIKDINTIRAGDKV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCHHCCHHHCCCCEE SLYNTFYYVTDITHELGTGGKMDLTLMNWEGVKSKFYGE EEEEEEEEEEEHHHHHCCCCEEEEEEECCCCCCHHCCCC >Mature Secondary Structure MIFIELVLKNKYKIQLLSEETTLKESIDSIAYTLNLSLIETDELKNIGLVKGDSIQLYDY CEEEEEEECCCEEEEEECCHHHHHHHHHHEEEEEEEEEEECCCCCCCCEEECCCEEEEEE MFNSNEYKKIFDGTVRDINSSKKNKKLSIVCRERTITIEESEDEYLWKDGQTVTQRTKII EECCCCHHHHHCCHHHHCCCCCCCCEEEEEEEEEEEEEECCCCCEEECCCCCHHHHHEEE CKDWSIPVGNFAEINIGLSKDMRKESLFGMLKKDLKETAQKGGSLYKFRMSESLDLVELG EECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEC SNSVAYKLDNIVDDIQNKSTLSGAITQVKVLGKEETKKSTEKNKTSSSSEEKELILSPII CCCEEEEHHHHHHHHCCCHHHHHHHHEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHH GVFKKDTERYGTIQKLFQDEKIDDYSKAKSKADTLFSSGEDSISVPCIKDINTIRAGDKV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCHHCCHHHCCCCEE SLYNTFYYVTDITHELGTGGKMDLTLMNWEGVKSKFYGE EEEEEEEEEEEHHHHHCCCCEEEEEEECCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA