| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932778
Identifier: 187932778
GI number: 187932778
Start: 1871828
End: 1872427
Strand: Reverse
Name: 187932778
Synonym: CLL_A1789
Alternate gene names: NA
Gene position: 1872427-1871828 (Counterclockwise)
Preceding gene: 187934568
Following gene: 187935221
Centisome position: 49.27
GC content: 31.17
Gene sequence:
>600_bases TTGATAACAGGATGCAATAAAAAAGTTGCTCCACCAGAAGATTTTGCTAAAGCGTTTTATGATTTAGCAAAATATGTAAA CTCAGATGCTATAACATCTTTAGGAATGAGTGTTGATGAAGCAAACACAGTAAAAGCAGAATATGAAAAAGCACTTAAGG GTAAAATTAGAAATGATTTAATATCAAATGGTCTTCAATGTACAGATGAGCAAGTGAATTTACTTTATGATGCTCAATTA ACTGCACAAAAGAAAGCAACTTGTACTATAGAAACAATAACAAGTGATGAGAAAACTGCAGTCGTTAAAATAAAAACAAC TCATATAAACATACAAGGTATTGGTGAATCGGCTGCTAATGATACCATTAAAGAAGTACAAAATATGAATATTACCGATA CTAACGTAGCATTAGCTAAGGCATTAGAACTTTATATTGCAAAGTTTACAGAGGGTTGCAATAATACTGAAGCATCAAGT GACACTCTAGAAAATACATTTACTTTTAAGAAGATGAAGGATGATAAAAATATAGAAGCATGGGTTCCTGATAATCCAGT TACCTTTGGAAATCAAGTAGCAACTATGATAAACCAATAA
Upstream 100 bases:
>100_bases CCCCATCTAAATCTAAATCCAAATTTTAGTGAAAATATAATTATTGCAATCTCCTATAATCATATTTTACTATACATTAA TTATTTTATTCAAATTCAAA
Downstream 100 bases:
>100_bases TTAAAATTTTAATAAGTAGATAAATATTAGGCTGTTGCTTTTGCAACAGCCTTTAGTGTATGATAAATTTTAATTATTCC AACTAAAATTACATTCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MITGCNKKVAPPEDFAKAFYDLAKYVNSDAITSLGMSVDEANTVKAEYEKALKGKIRNDLISNGLQCTDEQVNLLYDAQL TAQKKATCTIETITSDEKTAVVKIKTTHINIQGIGESAANDTIKEVQNMNITDTNVALAKALELYIAKFTEGCNNTEASS DTLENTFTFKKMKDDKNIEAWVPDNPVTFGNQVATMINQ
Sequences:
>Translated_199_residues MITGCNKKVAPPEDFAKAFYDLAKYVNSDAITSLGMSVDEANTVKAEYEKALKGKIRNDLISNGLQCTDEQVNLLYDAQL TAQKKATCTIETITSDEKTAVVKIKTTHINIQGIGESAANDTIKEVQNMNITDTNVALAKALELYIAKFTEGCNNTEASS DTLENTFTFKKMKDDKNIEAWVPDNPVTFGNQVATMINQ >Mature_199_residues MITGCNKKVAPPEDFAKAFYDLAKYVNSDAITSLGMSVDEANTVKAEYEKALKGKIRNDLISNGLQCTDEQVNLLYDAQL TAQKKATCTIETITSDEKTAVVKIKTTHINIQGIGESAANDTIKEVQNMNITDTNVALAKALELYIAKFTEGCNNTEASS DTLENTFTFKKMKDDKNIEAWVPDNPVTFGNQVATMINQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21830; Mature: 21830
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITGCNKKVAPPEDFAKAFYDLAKYVNSDAITSLGMSVDEANTVKAEYEKALKGKIRNDL CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ISNGLQCTDEQVNLLYDAQLTAQKKATCTIETITSDEKTAVVKIKTTHINIQGIGESAAN HHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCHHH DTIKEVQNMNITDTNVALAKALELYIAKFTEGCNNTEASSDTLENTFTFKKMKDDKNIEA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEE WVPDNPVTFGNQVATMINQ ECCCCCCCCCHHHHHHHCC >Mature Secondary Structure MITGCNKKVAPPEDFAKAFYDLAKYVNSDAITSLGMSVDEANTVKAEYEKALKGKIRNDL CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ISNGLQCTDEQVNLLYDAQLTAQKKATCTIETITSDEKTAVVKIKTTHINIQGIGESAAN HHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCHHH DTIKEVQNMNITDTNVALAKALELYIAKFTEGCNNTEASSDTLENTFTFKKMKDDKNIEA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEE WVPDNPVTFGNQVATMINQ ECCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA