| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932551
Identifier: 187932551
GI number: 187932551
Start: 2664060
End: 2664788
Strand: Reverse
Name: 187932551
Synonym: CLL_A2557
Alternate gene names: NA
Gene position: 2664788-2664060 (Counterclockwise)
Preceding gene: 187935233
Following gene: 187934518
Centisome position: 70.12
GC content: 28.4
Gene sequence:
>729_bases ATGTCAAAAATAGGGGCATTTTTTGATTTAGATGGAACATTATATAGAGAAGGTTTAATTACAGAAGTATTTAAAAAAAT GGTTAAATATGAGATTATAGCACCTGAGAGATGGTATAATGAAGTAAAGCCTCATTTTTTAAAATGGGATAAGAGACAAG GTGATTATGATAATTATCTTTTAAAAATGGTAGATGTTTATTTAGAAGCTATCCAAGGACTAGAAAAACATCAAGTAGAG CATATAGCCCAAAAAGTAGTTGAACAAAAAGGTGATAGGGTTTACACTTTTACAAGAGATAGAATAAAGTGGCATAAAGA TCAAGGCCATATTATAATTATAATATCAGGTTCACCTTCAGAGCTTGTTAGGGAAATGGCTAATAAATATGGCTTTAATG ATTATAAAGGTACAATTTATATGGTAGACAATAAAGATATGTATACAAGTGAAGTTATACCTATGTGGGATAGTGATAGT AAATCTAAAGCTATAAACGAACTTGTAGAGAAATATAATATAGACCTTAATGAAAGTTATGCTTATGGAGATACTTCTGG AGATTACACTATGTTTAAGCATGTAGGGCATCCATTTTGCATTAATCCAACAAAAGAACTTTTACAAAAAGTTATGAGTG ACAATGAAGTTACAAATAAAGTTAATGTTATAGTAGAAAGAAAGGATGTAATATATAACTTAAATATTGAAGATATACAA TTTGTATAG
Upstream 100 bases:
>100_bases GATAAACAAGAAAAACAGAATACAATCTTTAACTAATTAAAAAAATACAGTATAATAAAATATAAAAAATATACTACACT ATGAAATAAGAGGTGAGATA
Downstream 100 bases:
>100_bases GAAAGAGTGGTACTGTGATTATTCGTGAGAACAACGTAAAGGTAGAAGAATTTAGTGATGAATTTATGATAAAACCTGAA AAGAGAGAGTATTTACCTAG
Product: HAD-superfamily subfamily IB hydrolase
Products: L-serine; D-serine; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSKIGAFFDLDGTLYREGLITEVFKKMVKYEIIAPERWYNEVKPHFLKWDKRQGDYDNYLLKMVDVYLEAIQGLEKHQVE HIAQKVVEQKGDRVYTFTRDRIKWHKDQGHIIIIISGSPSELVREMANKYGFNDYKGTIYMVDNKDMYTSEVIPMWDSDS KSKAINELVEKYNIDLNESYAYGDTSGDYTMFKHVGHPFCINPTKELLQKVMSDNEVTNKVNVIVERKDVIYNLNIEDIQ FV
Sequences:
>Translated_242_residues MSKIGAFFDLDGTLYREGLITEVFKKMVKYEIIAPERWYNEVKPHFLKWDKRQGDYDNYLLKMVDVYLEAIQGLEKHQVE HIAQKVVEQKGDRVYTFTRDRIKWHKDQGHIIIIISGSPSELVREMANKYGFNDYKGTIYMVDNKDMYTSEVIPMWDSDS KSKAINELVEKYNIDLNESYAYGDTSGDYTMFKHVGHPFCINPTKELLQKVMSDNEVTNKVNVIVERKDVIYNLNIEDIQ FV >Mature_241_residues SKIGAFFDLDGTLYREGLITEVFKKMVKYEIIAPERWYNEVKPHFLKWDKRQGDYDNYLLKMVDVYLEAIQGLEKHQVEH IAQKVVEQKGDRVYTFTRDRIKWHKDQGHIIIIISGSPSELVREMANKYGFNDYKGTIYMVDNKDMYTSEVIPMWDSDSK SKAINELVEKYNIDLNESYAYGDTSGDYTMFKHVGHPFCINPTKELLQKVMSDNEVTNKVNVIVERKDVIYNLNIEDIQF V
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: 3.1.3.3
Molecular weight: Translated: 28479; Mature: 28348
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIGAFFDLDGTLYREGLITEVFKKMVKYEIIAPERWYNEVKPHFLKWDKRQGDYDNYL CCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHCCCHHCCCCCCCCCHHHHH LKMVDVYLEAIQGLEKHQVEHIAQKVVEQKGDRVYTFTRDRIKWHKDQGHIIIIISGSPS HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHEEECCCCCEEEEEECCHH ELVREMANKYGFNDYKGTIYMVDNKDMYTSEVIPMWDSDSKSKAINELVEKYNIDLNESY HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCE AYGDTSGDYTMFKHVGHPFCINPTKELLQKVMSDNEVTNKVNVIVERKDVIYNLNIEDIQ ECCCCCCCCHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCEEEEEEECCEEEECCHHHEE FV CC >Mature Secondary Structure SKIGAFFDLDGTLYREGLITEVFKKMVKYEIIAPERWYNEVKPHFLKWDKRQGDYDNYL CCCCCEEECCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHCCCHHCCCCCCCCCHHHHH LKMVDVYLEAIQGLEKHQVEHIAQKVVEQKGDRVYTFTRDRIKWHKDQGHIIIIISGSPS HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHEEECCCCCEEEEEECCHH ELVREMANKYGFNDYKGTIYMVDNKDMYTSEVIPMWDSDSKSKAINELVEKYNIDLNESY HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCE AYGDTSGDYTMFKHVGHPFCINPTKELLQKVMSDNEVTNKVNVIVERKDVIYNLNIEDIQ ECCCCCCCCHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCEEEEEEECCEEEECCHHHEE FV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-O-phosphoserine; D-O-phosphoserine; H2O
Specific reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA