Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010682 |
Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187928885
Identifier: 187928885
GI number: 187928885
Start: 1893391
End: 1893777
Strand: Reverse
Name: 187928885
Synonym: Rpic_1803
Alternate gene names: NA
Gene position: 1893777-1893391 (Counterclockwise)
Preceding gene: 187928886
Following gene: 187928884
Centisome position: 48.03
GC content: 62.79
Gene sequence:
>387_bases ATGAAGCATCACCAAAATCCTCTCGCCCAACTGCTTTCGCTCCTGTTGATCGCGATGGTGCTTTTCTCGCGCCTTGCGAT TGCGGGATACGTCTGCCCGCCCGAGGCAGGGACCATGGCGAACCCCTCGACGATGGTTGTTTCCGTCGTGAACTGCCAGG ACATGGATGAGGCGCAGCCCGCGCTCTGCGCGGACCATCGACACGATGGGCGCCATTGGGCGGATGCCAACGGCCACGCT CCTGATCTTGGCATGCTGCCCGCCGCAATTGGGCTCGTGCACGTTCTTCCTCCTGCGCCTTACGCCGGACCGGCTTCCCG GACGGCTTCTCGGCCCGTTGCAGTACCTGGGCCCATCTACCTCGCAACAGCACGCTTGCGAATCTGA
Upstream 100 bases:
>100_bases TGACCATCATGCCCGCGCGCAATCGCCCCACACAGTTTTTGCCCGCCTTGCGGTCACGGTTTGGCAGAACTAGAGTGAAC ACAATTGTTGGCAGTGATTC
Downstream 100 bases:
>100_bases TCGCTCCCCATACGCGGCAATCCGTCGCCGCAAGCCTTGATTTCAATCGCCTCCAAGCGGGATGTCTGCTGATTCCCGTT TGGACCGGGCCCGAAGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKHHQNPLAQLLSLLLIAMVLFSRLAIAGYVCPPEAGTMANPSTMVVSVVNCQDMDEAQPALCADHRHDGRHWADANGHA PDLGMLPAAIGLVHVLPPAPYAGPASRTASRPVAVPGPIYLATARLRI
Sequences:
>Translated_128_residues MKHHQNPLAQLLSLLLIAMVLFSRLAIAGYVCPPEAGTMANPSTMVVSVVNCQDMDEAQPALCADHRHDGRHWADANGHA PDLGMLPAAIGLVHVLPPAPYAGPASRTASRPVAVPGPIYLATARLRI >Mature_128_residues MKHHQNPLAQLLSLLLIAMVLFSRLAIAGYVCPPEAGTMANPSTMVVSVVNCQDMDEAQPALCADHRHDGRHWADANGHA PDLGMLPAAIGLVHVLPPAPYAGPASRTASRPVAVPGPIYLATARLRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13527; Mature: 13527
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHHQNPLAQLLSLLLIAMVLFSRLAIAGYVCPPEAGTMANPSTMVVSVVNCQDMDEAQP CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC ALCADHRHDGRHWADANGHAPDLGMLPAAIGLVHVLPPAPYAGPASRTASRPVAVPGPIY CHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE LATARLRI EEEEEECC >Mature Secondary Structure MKHHQNPLAQLLSLLLIAMVLFSRLAIAGYVCPPEAGTMANPSTMVVSVVNCQDMDEAQP CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC ALCADHRHDGRHWADANGHAPDLGMLPAAIGLVHVLPPAPYAGPASRTASRPVAVPGPIY CHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE LATARLRI EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA