Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187928770
Identifier: 187928770
GI number: 187928770
Start: 1778946
End: 1780157
Strand: Reverse
Name: 187928770
Synonym: Rpic_1687
Alternate gene names: NA
Gene position: 1780157-1778946 (Counterclockwise)
Preceding gene: 187928771
Following gene: 187928767
Centisome position: 45.15
GC content: 56.19
Gene sequence:
>1212_bases ATGACCAGTAACGTGCGCCGAACTCCGTCCAATCTCATTGAAGGGGCATTCCATGCCCCTTCAGGCGCAGTCATATGGCT TGAATCTAGGAAACAACAGCTTGCCGCAGATATTGTTTCAGCCCACGCCGCCTGCACCAACGCTCTGACGTTCGGCAACA AGGACTTTGTCCGAGGATTGCATGTTGCTGCCCGCGGGCTTGGGGAGCGAATTGGATACAGTGGCAAGCTTGCGGCATTG TTCGAGCGCCACCGTCACTGGTTCAAAAACGGCCAGAACATCGATGTTCATGCAATAAAGCCCGCGCTCCGACTGGTGCA AACGACAGAGGAAGAGCAGCTGTGGACGTTGGCTCGTGCGTGCTGGTCCATGCCGTACTCGAAAGGATACGGCCGCAGGT TACGCTTCCTTGTAGTGGACGAAACCCATGGCGGCCTGATTGGTATCCTGGGACTGCAATCCCCTCCGGCAGACCTTGCC TGCCGAGACACACTATTCGAGTTTCCCGCTGGTCGGAAACTCGAGCTGGTCAACCAAACGATGGACGCCTACACCATCGG CGCGATCCCGCCTTATAGCTTCCTGCTAGGAGGCAAGCTTTGCGCGGGACTACTCGCAGCGGACGCAATCCGGGAGGCGT ACTGGCTAAGATACGCGGCGAAGCGCACGACAATGCAACGCCAACAAATCCAGCAGCCGCTCGTAGCGATTACAACGACC AGCGCGTTTGGCAAGAGCGCGCAGTACAACCGCCTGCGATACGATAGCCGTCTGCTGGCGGAGCCGATTGGTTACACGAA GGGATTCGGGATGCTCCATTTGGAGCATCTCTACGATCGCATGTGCGATTTGCTGGTAGCCCATGGACAGCTGACACCCA ACGGATATGGAAACGGCCCCAAGGTTCGCTGGCAAAACGTTACCAAAGCGCTGATGTTGCTTGGGTTACCGCTGGACCTA CTTGCACATGGCGTGCAACGTGAAGTCTATCTATTCAACCTAGTCAGCGACCTCCACTCTGGCATGGCAGGCGGTTCTTT CGGAGCCCCCCAAAGACTATCTGTGGATGAGTACTCGGATTACTGGAAGCAACGATGGGCAGTACCTCGATCCCACCGCT ACCCAGATTGGCGCGAAGTCGATGCACAAAATCTAGTGCGCGAGAAGGTCCAAGAATGGGACCTTCTCACAGCGCAAAAA AAACAGCGCTAA
Upstream 100 bases:
>100_bases GATGAGGCTACACGCGTGAAAGTCGCATGCTGAGACACGGCACTAGCGTTGCTTTTCCCATGCTTGACTTCCGCGCGCAC CTCTGGCCAAATAGCGCCCC
Downstream 100 bases:
>100_bases CAACTTGGACGTCTTTCACGTGACGTCTCAATTTTCGTTTCCAATTCCAGCTCGCCGATCTGTTGAAGTCGGCCAAGAAC CCCTGCCAAGTCTTCGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTSNVRRTPSNLIEGAFHAPSGAVIWLESRKQQLAADIVSAHAACTNALTFGNKDFVRGLHVAARGLGERIGYSGKLAAL FERHRHWFKNGQNIDVHAIKPALRLVQTTEEEQLWTLARACWSMPYSKGYGRRLRFLVVDETHGGLIGILGLQSPPADLA CRDTLFEFPAGRKLELVNQTMDAYTIGAIPPYSFLLGGKLCAGLLAADAIREAYWLRYAAKRTTMQRQQIQQPLVAITTT SAFGKSAQYNRLRYDSRLLAEPIGYTKGFGMLHLEHLYDRMCDLLVAHGQLTPNGYGNGPKVRWQNVTKALMLLGLPLDL LAHGVQREVYLFNLVSDLHSGMAGGSFGAPQRLSVDEYSDYWKQRWAVPRSHRYPDWREVDAQNLVREKVQEWDLLTAQK KQR
Sequences:
>Translated_403_residues MTSNVRRTPSNLIEGAFHAPSGAVIWLESRKQQLAADIVSAHAACTNALTFGNKDFVRGLHVAARGLGERIGYSGKLAAL FERHRHWFKNGQNIDVHAIKPALRLVQTTEEEQLWTLARACWSMPYSKGYGRRLRFLVVDETHGGLIGILGLQSPPADLA CRDTLFEFPAGRKLELVNQTMDAYTIGAIPPYSFLLGGKLCAGLLAADAIREAYWLRYAAKRTTMQRQQIQQPLVAITTT SAFGKSAQYNRLRYDSRLLAEPIGYTKGFGMLHLEHLYDRMCDLLVAHGQLTPNGYGNGPKVRWQNVTKALMLLGLPLDL LAHGVQREVYLFNLVSDLHSGMAGGSFGAPQRLSVDEYSDYWKQRWAVPRSHRYPDWREVDAQNLVREKVQEWDLLTAQK KQR >Mature_402_residues TSNVRRTPSNLIEGAFHAPSGAVIWLESRKQQLAADIVSAHAACTNALTFGNKDFVRGLHVAARGLGERIGYSGKLAALF ERHRHWFKNGQNIDVHAIKPALRLVQTTEEEQLWTLARACWSMPYSKGYGRRLRFLVVDETHGGLIGILGLQSPPADLAC RDTLFEFPAGRKLELVNQTMDAYTIGAIPPYSFLLGGKLCAGLLAADAIREAYWLRYAAKRTTMQRQQIQQPLVAITTTS AFGKSAQYNRLRYDSRLLAEPIGYTKGFGMLHLEHLYDRMCDLLVAHGQLTPNGYGNGPKVRWQNVTKALMLLGLPLDLL AHGVQREVYLFNLVSDLHSGMAGGSFGAPQRLSVDEYSDYWKQRWAVPRSHRYPDWREVDAQNLVREKVQEWDLLTAQKK QR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45346; Mature: 45214
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNVRRTPSNLIEGAFHAPSGAVIWLESRKQQLAADIVSAHAACTNALTFGNKDFVRGL CCCCCCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH HVAARGLGERIGYSGKLAALFERHRHWFKNGQNIDVHAIKPALRLVQTTEEEQLWTLARA HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHH CWSMPYSKGYGRRLRFLVVDETHGGLIGILGLQSPPADLACRDTLFEFPAGRKLELVNQT HHCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHH MDAYTIGAIPPYSFLLGGKLCAGLLAADAIREAYWLRYAAKRTTMQRQQIQQPLVAITTT HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC SAFGKSAQYNRLRYDSRLLAEPIGYTKGFGMLHLEHLYDRMCDLLVAHGQLTPNGYGNGP HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC KVRWQNVTKALMLLGLPLDLLAHGVQREVYLFNLVSDLHSGMAGGSFGAPQRLSVDEYSD CEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH YWKQRWAVPRSHRYPDWREVDAQNLVREKVQEWDLLTAQKKQR HHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSNVRRTPSNLIEGAFHAPSGAVIWLESRKQQLAADIVSAHAACTNALTFGNKDFVRGL CCCCCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH HVAARGLGERIGYSGKLAALFERHRHWFKNGQNIDVHAIKPALRLVQTTEEEQLWTLARA HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHH CWSMPYSKGYGRRLRFLVVDETHGGLIGILGLQSPPADLACRDTLFEFPAGRKLELVNQT HHCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHH MDAYTIGAIPPYSFLLGGKLCAGLLAADAIREAYWLRYAAKRTTMQRQQIQQPLVAITTT HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC SAFGKSAQYNRLRYDSRLLAEPIGYTKGFGMLHLEHLYDRMCDLLVAHGQLTPNGYGNGP HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC KVRWQNVTKALMLLGLPLDLLAHGVQREVYLFNLVSDLHSGMAGGSFGAPQRLSVDEYSD CEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH YWKQRWAVPRSHRYPDWREVDAQNLVREKVQEWDLLTAQKKQR HHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA