Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is apaH [H]
Identifier: 187927721
GI number: 187927721
Start: 665340
End: 666188
Strand: Reverse
Name: apaH [H]
Synonym: Rpic_0625
Alternate gene names: 187927721
Gene position: 666188-665340 (Counterclockwise)
Preceding gene: 187927722
Following gene: 187927713
Centisome position: 16.9
GC content: 63.96
Gene sequence:
>849_bases ATGAATCGGGAATCTCCCCACGCCATCGGCGACCTCCAAGGCTGCTGCTCCCCACTCCAGACCCTGCTGGCCGCCCTCCC AGCCAACGCCCCTCTCCGCTTCGTCGGCGATCTGATCAACCGTGGCCCCGACTCTCTCGCCACACTGCGCCAGGTCATTT CCCTATGCGAAGCGGGACGCGCACGCACCGTTCTCGGCAACCATGACATCCACCTGCTGGCCGTGGCGGCAGGGGTGCGA AAACCCGGCAAACGCGACACCATCGCCGAGATACTCTCTGCCCCCGATAGCGACCAACTCATCACTTGGCTGCGCCACCA GCCGCTGGCCATCTTCGAAAACAGCTTTCTGATGGTGCACGCCGGCGTCCTGCCTCAATGGATAACAGGCGACGTACTCG AGCTGGCCGGCGCAGTGGAGCGCGAGCTGCGTAGCCCACATTGGAAAACCTTCCTGGCCGATGCGTTTGGCAACCATCCC GACAAGTGGAGTAACGATCTCGTCGGCATGGATCGGCTGCGGCTGACCATCAACGCCTTGACGCGCCTACGCTTCTGCAA GCCCGATGGGACGATGGAGTTCGAGACGACTGACGCCGATGGCGCTCCGGATGGCCACATGCCGTGGTTCGACGTGCCAG GGCGCCGTACGCGCGGCACGCCGATCGTGTTCGGGCATTGGTCCACACGCGGGCTGGTGATGCGCGACGATGTGATAGGC CTGGATACCGGCTGCGTGTGGGGTGGCAAACTGACGGCGGCGAAGCTATCGTTGACGCCAGCCGGGCGTGACGTGATCCA GGTGGATTGCGAGCAGGCGCAGGACCCGCTCGCGCACAAGAAGAAATAG
Upstream 100 bases:
>100_bases TTTGCTATAGCCCTGATCAGGGAGCGCCAACAGACTCGTGCCGCATAAAATGCGTAAGGTCGATTTCTTCGCAATGATGG CGTTTTGAGGGACATCTGTC
Downstream 100 bases:
>100_bases CCGAGTAGCCTAGCCCGCGCGGTCGATCAGCGCGGCAACAGCGTCGTGACTATGTGCGGCCAGCCCACGGCGGTCCATCT CCGGAGCTACGGCGGGGCCT
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MNRESPHAIGDLQGCCSPLQTLLAALPANAPLRFVGDLINRGPDSLATLRQVISLCEAGRARTVLGNHDIHLLAVAAGVR KPGKRDTIAEILSAPDSDQLITWLRHQPLAIFENSFLMVHAGVLPQWITGDVLELAGAVERELRSPHWKTFLADAFGNHP DKWSNDLVGMDRLRLTINALTRLRFCKPDGTMEFETTDADGAPDGHMPWFDVPGRRTRGTPIVFGHWSTRGLVMRDDVIG LDTGCVWGGKLTAAKLSLTPAGRDVIQVDCEQAQDPLAHKKK
Sequences:
>Translated_282_residues MNRESPHAIGDLQGCCSPLQTLLAALPANAPLRFVGDLINRGPDSLATLRQVISLCEAGRARTVLGNHDIHLLAVAAGVR KPGKRDTIAEILSAPDSDQLITWLRHQPLAIFENSFLMVHAGVLPQWITGDVLELAGAVERELRSPHWKTFLADAFGNHP DKWSNDLVGMDRLRLTINALTRLRFCKPDGTMEFETTDADGAPDGHMPWFDVPGRRTRGTPIVFGHWSTRGLVMRDDVIG LDTGCVWGGKLTAAKLSLTPAGRDVIQVDCEQAQDPLAHKKK >Mature_282_residues MNRESPHAIGDLQGCCSPLQTLLAALPANAPLRFVGDLINRGPDSLATLRQVISLCEAGRARTVLGNHDIHLLAVAAGVR KPGKRDTIAEILSAPDSDQLITWLRHQPLAIFENSFLMVHAGVLPQWITGDVLELAGAVERELRSPHWKTFLADAFGNHP DKWSNDLVGMDRLRLTINALTRLRFCKPDGTMEFETTDADGAPDGHMPWFDVPGRRTRGTPIVFGHWSTRGLVMRDDVIG LDTGCVWGGKLTAAKLSLTPAGRDVIQVDCEQAQDPLAHKKK
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=256, Percent_Identity=42.1875, Blast_Score=192, Evalue=1e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 30865; Mature: 30865
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRESPHAIGDLQGCCSPLQTLLAALPANAPLRFVGDLINRGPDSLATLRQVISLCEAGR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC ARTVLGNHDIHLLAVAAGVRKPGKRDTIAEILSAPDSDQLITWLRHQPLAIFENSFLMVH CEEEECCCCEEEEEEEHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCEEEEE AGVLPQWITGDVLELAGAVERELRSPHWKTFLADAFGNHPDKWSNDLVGMDRLRLTINAL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH TRLRFCKPDGTMEFETTDADGAPDGHMPWFDVPGRRTRGTPIVFGHWSTRGLVMRDDVIG HHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCEEE LDTGCVWGGKLTAAKLSLTPAGRDVIQVDCEQAQDPLAHKKK CCCCCEECCCEEEEEEEECCCCCCEEEEEHHHHCCCCCCCCC >Mature Secondary Structure MNRESPHAIGDLQGCCSPLQTLLAALPANAPLRFVGDLINRGPDSLATLRQVISLCEAGR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC ARTVLGNHDIHLLAVAAGVRKPGKRDTIAEILSAPDSDQLITWLRHQPLAIFENSFLMVH CEEEECCCCEEEEEEEHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCEEEEE AGVLPQWITGDVLELAGAVERELRSPHWKTFLADAFGNHPDKWSNDLVGMDRLRLTINAL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH TRLRFCKPDGTMEFETTDADGAPDGHMPWFDVPGRRTRGTPIVFGHWSTRGLVMRDDVIG HHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCEEE LDTGCVWGGKLTAAKLSLTPAGRDVIQVDCEQAQDPLAHKKK CCCCCEECCCEEEEEEEECCCCCCEEEEEHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]