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The map label for this gene is 187927688

Identifier: 187927688

GI number: 187927688

Start: 627517

End: 628368

Strand: Reverse

Name: 187927688

Synonym: Rpic_0592

Alternate gene names: NA

Gene position: 628368-627517 (Counterclockwise)

Preceding gene: 187927689

Following gene: 187927687

Centisome position: 15.94

GC content: 63.85

Gene sequence:

>852_bases
ATGAAAAACGCGCGTGCAATCGTGATGCTGATCGTCGCATTGGTAGCGGGGATCGCGGCCGTTGTCTCTGCATCACGTTG
GCTGTCTCAGCAGTCAACCAGCTCAGTCAAGCAAGTCGTGGTGGCCGCCAGCGACATGGACCTCGGCCAACCGCTGGGCA
ATGAGCAGCTGCGCACGGTCAGCTGGCCGGCGGGCAGCTTGCCACCGGGCACGTTTGACGACCCCAAGGCGTTGCAAGGG
CGCGTGGTGCGCGCCAGCCTGCAGAAAGGCGAACCGATTCTGGAAAACAAGCTCGCGCCCATCGGTACCAAGGGCGGGCT
TTCCGCCGTCATCGCGGAAGGCAAGCGCGCCATTACCGTACGTGTGAATGACGTGGTGGGCGTAGCGGGCTTTGCGCTGC
CGGGCAACCTGGTCGACGTGATCGTCAACACCAACGAAGACGCGAAGAGCGCGAGCAACAATAACAACAGCATTTCCAAG
ATCGTGCTCGAAAAGATCCTGGTGCTGGCAGTCGCGCAGCAAGTCAGCCGGGACGATACCCAGCCCAAGGTCGTCAACGC
GGTGACGCTGGAAGTCACACCCGATCAGGCAGAGAAGCTCGATGTGGCGCGCAGCGTGGGAACGCTCTCGCTGGTGCTGC
GCAACCAAGTCGACGTGGCCGCCACAGCAACCGGCGGCGCCACCAAGGGCACCTTGCTGGGCACGCCCGCAGCCGAGCCC
GCACCCAAGGTGGTGATGGTCAGCACGACACGTGCAACCGCCAAGGTGCGCCACGTTGCCTCGGGCCCGATCCGGCAGCG
CGACTGCATCGGTGTGCTGGCCGGCGTGCAAGGCAGCATGGAATGCTTCTGA

Upstream 100 bases:

>100_bases
TCCATGAGTGCGGGTATGGGCTGGCGGCAGGACAAGCAGGCTCACACCTGAGCCTTGCCTATTCGATCCGCTCTATTGAT
CTCAGAAGGGGGAACTCATC

Downstream 100 bases:

>100_bases
CCCTCCACACACCTGACAGTCCTTCAACACAACACGTAGCGCAAGTCGAGGTTAACCAGCCACAGCGTATCAACCGCATT
TTTACCTTGTGCAGCAGACC

Product: Flp pilus assembly protein CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein CpaB-Like Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; CtpC Protein; Pilus Assembly-Related Exported Protein; Flp Pilus Assembly Protein Cpab; CpaB2 Pilus Assembly Protein; CpaB Family Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; SAF Domain Protein

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKNARAIVMLIVALVAGIAAVVSASRWLSQQSTSSVKQVVVAASDMDLGQPLGNEQLRTVSWPAGSLPPGTFDDPKALQG
RVVRASLQKGEPILENKLAPIGTKGGLSAVIAEGKRAITVRVNDVVGVAGFALPGNLVDVIVNTNEDAKSASNNNNSISK
IVLEKILVLAVAQQVSRDDTQPKVVNAVTLEVTPDQAEKLDVARSVGTLSLVLRNQVDVAATATGGATKGTLLGTPAAEP
APKVVMVSTTRATAKVRHVASGPIRQRDCIGVLAGVQGSMECF

Sequences:

>Translated_283_residues
MKNARAIVMLIVALVAGIAAVVSASRWLSQQSTSSVKQVVVAASDMDLGQPLGNEQLRTVSWPAGSLPPGTFDDPKALQG
RVVRASLQKGEPILENKLAPIGTKGGLSAVIAEGKRAITVRVNDVVGVAGFALPGNLVDVIVNTNEDAKSASNNNNSISK
IVLEKILVLAVAQQVSRDDTQPKVVNAVTLEVTPDQAEKLDVARSVGTLSLVLRNQVDVAATATGGATKGTLLGTPAAEP
APKVVMVSTTRATAKVRHVASGPIRQRDCIGVLAGVQGSMECF
>Mature_283_residues
MKNARAIVMLIVALVAGIAAVVSASRWLSQQSTSSVKQVVVAASDMDLGQPLGNEQLRTVSWPAGSLPPGTFDDPKALQG
RVVRASLQKGEPILENKLAPIGTKGGLSAVIAEGKRAITVRVNDVVGVAGFALPGNLVDVIVNTNEDAKSASNNNNSISK
IVLEKILVLAVAQQVSRDDTQPKVVNAVTLEVTPDQAEKLDVARSVGTLSLVLRNQVDVAATATGGATKGTLLGTPAAEP
APKVVMVSTTRATAKVRHVASGPIRQRDCIGVLAGVQGSMECF

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29249; Mature: 29249

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNARAIVMLIVALVAGIAAVVSASRWLSQQSTSSVKQVVVAASDMDLGQPLGNEQLRTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEE
SWPAGSLPPGTFDDPKALQGRVVRASLQKGEPILENKLAPIGTKGGLSAVIAEGKRAITV
ECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHCCCEEEEE
RVNDVVGVAGFALPGNLVDVIVNTNEDAKSASNNNNSISKIVLEKILVLAVAQQVSRDDT
EECCEEEECCCCCCCCEEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
QPKVVNAVTLEVTPDQAEKLDVARSVGTLSLVLRNQVDVAATATGGATKGTLLGTPAAEP
CCEEEEEEEEEECCCHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCEEECCCCCC
APKVVMVSTTRATAKVRHVASGPIRQRDCIGVLAGVQGSMECF
CCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKNARAIVMLIVALVAGIAAVVSASRWLSQQSTSSVKQVVVAASDMDLGQPLGNEQLRTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEE
SWPAGSLPPGTFDDPKALQGRVVRASLQKGEPILENKLAPIGTKGGLSAVIAEGKRAITV
ECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHCCCEEEEE
RVNDVVGVAGFALPGNLVDVIVNTNEDAKSASNNNNSISKIVLEKILVLAVAQQVSRDDT
EECCEEEECCCCCCCCEEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
QPKVVNAVTLEVTPDQAEKLDVARSVGTLSLVLRNQVDVAATATGGATKGTLLGTPAAEP
CCEEEEEEEEEECCCHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCEEECCCCCC
APKVVMVSTTRATAKVRHVASGPIRQRDCIGVLAGVQGSMECF
CCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA