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The map label for this gene is 187927659

Identifier: 187927659

GI number: 187927659

Start: 595293

End: 596468

Strand: Reverse

Name: 187927659

Synonym: Rpic_0562

Alternate gene names: NA

Gene position: 596468-595293 (Counterclockwise)

Preceding gene: 187927660

Following gene: 187927658

Centisome position: 15.13

GC content: 63.69

Gene sequence:

>1176_bases
ATGACTGCCACCCTTCCGTCCTACGCCGCCTTCGATTCGAACGTGCGAGCTGCCTATACCGACGCCGAGCGCCGCGAAGC
GTTCCTGCCCACACCTTGCGTTCAAAACCACGCGGCCAACCTGCACGCGCTGCCCAACGGCGACTTGCTGTGCGTGTGGT
TTGGCGGCACGCAGGAAGGCATTCCCGATGTATCGATCTACCTGTCTCGGTTGGCGGCAGGCACCTCCGAATGGCAGCCT
GCGACCAAGCTATCGGAAGACACGACACGATCGGAGCAGAACCCGGTACTGTTCACCACACCCACCGGCGAACTCTGGCT
GATCTACACCGCGCAGCTTTCGGGACACCAGAACACAGCCATCGTGCGCCGGCGTATCTCGACAGACGGCGGCCGAAGCT
GGGGGCCCATCGATACGCTGTTCGACCAGGCCGGCACCTTCGTGCGCCAGCCAATCGTCGTGCTGCCCGACGGCGCGTGG
GCCTGCCCGGTCTTCCTGTGCCGCACGCAACCAGGGGAACGCTGGGTCGGCAATGACGACATCAGCGCCGTCATGATCTC
CGAAGACCAGGGCCGCACCTGGAGCCGCCACGACGTGCCCGACAGCATCGGCTGCGTGCACATGAACGTGCAGACACTGG
CCGACGGCAGCCTGCTGGCGCTGTACCGCAGCCGCTGGGCAGATCACATCTACGCCAGCCGCTCGCAAGACGGCCGTACC
TGGAGCGCACCGCAGCCGACAACGCTGCCCAACAACAATTCGTCGATCCAGTTTGTGGCACTGCGAAACGGTCATCTCGC
GCTGGTCTACAACGAGAGCGATGCCTCGCACAGCACCGGTCGACGCACCTCGCTGTACGACGACATTGAAGACGCCGAAG
ACCATGGCGAGCTGCGCGACCAGCAGGCATCCACGCGGGGCACCGCTTTCTGGGGCGCCCCGCGTGCGCCGCTGTCGCTG
GCCATCTCGGAAGATGGTGGCCAAACCTGGCGCCGCCGCAACATTGAAATTGGCGACGGTTATTGCATGACCAACAATTC
AGCCGACCAGCGCAACCGCGAGTATTCGTATCCCTCCATCGTGCAAGGGAACGACGGCGCGCTGCACATCGCCTTTACCT
ATTTCCGCCAGCGTATCAAATACGTGACGGTTGACGAATCGTGGGTGCGCGGCTGA

Upstream 100 bases:

>100_bases
GCGGCTGAGCCTGCACAGGCCAGCGCACCCGTCGCCAACATCAAGCCAAACAACGCGGCGCATTGATCCCCAGACACCGA
GCATTGAACTGAGACATAAC

Downstream 100 bases:

>100_bases
CCCCGTTTGGGGCCGATTTGCTACAGTGGCTCCCCATCTGAGGTCGGTTGGATATTTGCAGACATGAAAGTCACGAAGCG
CCGCGAGGCCATGCTGAAAG

Product: glycosyl hydrolase BNR repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTATLPSYAAFDSNVRAAYTDAERREAFLPTPCVQNHAANLHALPNGDLLCVWFGGTQEGIPDVSIYLSRLAAGTSEWQP
ATKLSEDTTRSEQNPVLFTTPTGELWLIYTAQLSGHQNTAIVRRRISTDGGRSWGPIDTLFDQAGTFVRQPIVVLPDGAW
ACPVFLCRTQPGERWVGNDDISAVMISEDQGRTWSRHDVPDSIGCVHMNVQTLADGSLLALYRSRWADHIYASRSQDGRT
WSAPQPTTLPNNNSSIQFVALRNGHLALVYNESDASHSTGRRTSLYDDIEDAEDHGELRDQQASTRGTAFWGAPRAPLSL
AISEDGGQTWRRRNIEIGDGYCMTNNSADQRNREYSYPSIVQGNDGALHIAFTYFRQRIKYVTVDESWVRG

Sequences:

>Translated_391_residues
MTATLPSYAAFDSNVRAAYTDAERREAFLPTPCVQNHAANLHALPNGDLLCVWFGGTQEGIPDVSIYLSRLAAGTSEWQP
ATKLSEDTTRSEQNPVLFTTPTGELWLIYTAQLSGHQNTAIVRRRISTDGGRSWGPIDTLFDQAGTFVRQPIVVLPDGAW
ACPVFLCRTQPGERWVGNDDISAVMISEDQGRTWSRHDVPDSIGCVHMNVQTLADGSLLALYRSRWADHIYASRSQDGRT
WSAPQPTTLPNNNSSIQFVALRNGHLALVYNESDASHSTGRRTSLYDDIEDAEDHGELRDQQASTRGTAFWGAPRAPLSL
AISEDGGQTWRRRNIEIGDGYCMTNNSADQRNREYSYPSIVQGNDGALHIAFTYFRQRIKYVTVDESWVRG
>Mature_390_residues
TATLPSYAAFDSNVRAAYTDAERREAFLPTPCVQNHAANLHALPNGDLLCVWFGGTQEGIPDVSIYLSRLAAGTSEWQPA
TKLSEDTTRSEQNPVLFTTPTGELWLIYTAQLSGHQNTAIVRRRISTDGGRSWGPIDTLFDQAGTFVRQPIVVLPDGAWA
CPVFLCRTQPGERWVGNDDISAVMISEDQGRTWSRHDVPDSIGCVHMNVQTLADGSLLALYRSRWADHIYASRSQDGRTW
SAPQPTTLPNNNSSIQFVALRNGHLALVYNESDASHSTGRRTSLYDDIEDAEDHGELRDQQASTRGTAFWGAPRAPLSLA
ISEDGGQTWRRRNIEIGDGYCMTNNSADQRNREYSYPSIVQGNDGALHIAFTYFRQRIKYVTVDESWVRG

Specific function: Unknown

COG id: COG4692

COG function: function code G; Predicted neuraminidase (sialidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43443; Mature: 43312

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATLPSYAAFDSNVRAAYTDAERREAFLPTPCVQNHAANLHALPNGDLLCVWFGGTQEG
CCCCCCCHHHCCCCCEEEECCHHHHCCCCCCCHHHCCCCCEEECCCCCEEEEEECCCCCC
IPDVSIYLSRLAAGTSEWQPATKLSEDTTRSEQNPVLFTTPTGELWLIYTAQLSGHQNTA
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCHH
IVRRRISTDGGRSWGPIDTLFDQAGTFVRQPIVVLPDGAWACPVFLCRTQPGERWVGNDD
HHEEECCCCCCCCCCCHHHHHHHHCHHHHCCEEEECCCCCCCEEEEEECCCCCCCCCCCC
ISAVMISEDQGRTWSRHDVPDSIGCVHMNVQTLADGSLLALYRSRWADHIYASRSQDGRT
CEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCE
WSAPQPTTLPNNNSSIQFVALRNGHLALVYNESDASHSTGRRTSLYDDIEDAEDHGELRD
ECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCHHCHHCCHHHHHHHH
QQASTRGTAFWGAPRAPLSLAISEDGGQTWRRRNIEIGDGYCMTNNSADQRNREYSYPSI
HHHCCCCCEEECCCCCCEEEEEECCCCCCHHHCCCEECCCEEEECCCHHHCCCCCCCCCE
VQGNDGALHIAFTYFRQRIKYVTVDESWVRG
EECCCCEEEEEEHHHHHHEEEEEECHHHCCC
>Mature Secondary Structure 
TATLPSYAAFDSNVRAAYTDAERREAFLPTPCVQNHAANLHALPNGDLLCVWFGGTQEG
CCCCCCHHHCCCCCEEEECCHHHHCCCCCCCHHHCCCCCEEECCCCCEEEEEECCCCCC
IPDVSIYLSRLAAGTSEWQPATKLSEDTTRSEQNPVLFTTPTGELWLIYTAQLSGHQNTA
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCHH
IVRRRISTDGGRSWGPIDTLFDQAGTFVRQPIVVLPDGAWACPVFLCRTQPGERWVGNDD
HHEEECCCCCCCCCCCHHHHHHHHCHHHHCCEEEECCCCCCCEEEEEECCCCCCCCCCCC
ISAVMISEDQGRTWSRHDVPDSIGCVHMNVQTLADGSLLALYRSRWADHIYASRSQDGRT
CEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCE
WSAPQPTTLPNNNSSIQFVALRNGHLALVYNESDASHSTGRRTSLYDDIEDAEDHGELRD
ECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCHHCHHCCHHHHHHHH
QQASTRGTAFWGAPRAPLSLAISEDGGQTWRRRNIEIGDGYCMTNNSADQRNREYSYPSI
HHHCCCCCEEECCCCCCEEEEEECCCCCCHHHCCCEECCCEEEECCCHHHCCCCCCCCCE
VQGNDGALHIAFTYFRQRIKYVTVDESWVRG
EECCCCEEEEEEHHHHHHEEEEEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA