Click here to switch to the map view.

The map label for this gene is 187927650

Identifier: 187927650

GI number: 187927650

Start: 589817

End: 590197

Strand: Reverse

Name: 187927650

Synonym: Rpic_0552

Alternate gene names: NA

Gene position: 590197-589817 (Counterclockwise)

Preceding gene: 187927651

Following gene: 187927649

Centisome position: 14.97

GC content: 59.58

Gene sequence:

>381_bases
ATGACTCATGCATCCAATAAGACCAGCTTTCTCTGCACCCTTCCCGGAGCGGCAAAGAGCATGGCGTATTCCATTACGGT
TGGCTTCATCCGCGATGGGCAGCCGAACTGCGTGCAGTTCACCAGTTTCGTGGGTGAAGGAAGGCGGTCCTTCAGGGTGT
TGGCAAGCGCTCCGGATCTGGCGTCCGCAGCCATGGCCAGCGTTGAAACCTTGTGTCGCCTGGCCATCGGGCAAGTGATC
CGAGACAGCCTCCACGCGAAAACGGCACAGGGGGACCATACCCTGGATATGCGCGTGCAACCCTGGGAGGGCGAGCTCAG
ACCTGCTGGATCACGTAGCACGCTGAAGCCGCCCCGTCCACATTTGGTTGTTCGTGGATAG

Upstream 100 bases:

>100_bases
GGCGTCTCTGTAATACGCGCGACGTATTTCTGTGGCCCGTGGCTCTTTTTGATACTGAGTTGGCGAGGCGTGTTCCTTGC
ATGACCAGCCAGGAAACAAG

Downstream 100 bases:

>100_bases
TTCGATGGAGCGGGCGGAATGCGCGTACAGTGGAGCCACCCCTTTCTACGGAGATTGCTGTGGACGCCTATCCGACTTGC
CGCTACAAGGGGTTCGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MTHASNKTSFLCTLPGAAKSMAYSITVGFIRDGQPNCVQFTSFVGEGRRSFRVLASAPDLASAAMASVETLCRLAIGQVI
RDSLHAKTAQGDHTLDMRVQPWEGELRPAGSRSTLKPPRPHLVVRG

Sequences:

>Translated_126_residues
MTHASNKTSFLCTLPGAAKSMAYSITVGFIRDGQPNCVQFTSFVGEGRRSFRVLASAPDLASAAMASVETLCRLAIGQVI
RDSLHAKTAQGDHTLDMRVQPWEGELRPAGSRSTLKPPRPHLVVRG
>Mature_125_residues
THASNKTSFLCTLPGAAKSMAYSITVGFIRDGQPNCVQFTSFVGEGRRSFRVLASAPDLASAAMASVETLCRLAIGQVIR
DSLHAKTAQGDHTLDMRVQPWEGELRPAGSRSTLKPPRPHLVVRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13565; Mature: 13434

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHASNKTSFLCTLPGAAKSMAYSITVGFIRDGQPNCVQFTSFVGEGRRSFRVLASAPDL
CCCCCCCCEEEEECCCCCHHEEEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCH
ASAAMASVETLCRLAIGQVIRDSLHAKTAQGDHTLDMRVQPWEGELRPAGSRSTLKPPRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
HLVVRG
EEEEEC
>Mature Secondary Structure 
THASNKTSFLCTLPGAAKSMAYSITVGFIRDGQPNCVQFTSFVGEGRRSFRVLASAPDL
CCCCCCCEEEEECCCCCHHEEEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCH
ASAAMASVETLCRLAIGQVIRDSLHAKTAQGDHTLDMRVQPWEGELRPAGSRSTLKPPRP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
HLVVRG
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA