Click here to switch to the map view.

The map label for this gene is pqiA [H]

Identifier: 187927631

GI number: 187927631

Start: 567572

End: 568309

Strand: Reverse

Name: pqiA [H]

Synonym: Rpic_0531

Alternate gene names: 187927631

Gene position: 568309-567572 (Counterclockwise)

Preceding gene: 187927632

Following gene: 187927630

Centisome position: 14.41

GC content: 66.4

Gene sequence:

>738_bases
ATGAACAGCGCCACCACGCCTGCACCGGCGCAACCCGGTCAAGAGGGCCGCCCGCTGCGGGCCGCCGCACATGGCCTGGT
GACATGCGAACGCTGCGGCCTGCTGGCGCGCATGCCCGACTCCAGGGCCGCCACGCAAGCGGTGCTCACGCGCGAATACG
CGCCGGACGACACCGCCGCAGCGCCGGTCTGCCCGCGCTGCATGTCGCCCATGCACGTACGCAAGCCCGACAGCCTGGCG
CGCTGCTGGGCGCTGCTGATTGCGGCCGCCGCCATGTACCTGCCCGCCAACCTGCTGCCCGTGATGATTACCGACACCCT
GCTCGGCACACAGCAGGACACGATCATGAGCGGGATCGTCTACCTCTGGACGTCGGGGTCATGGCACCTGGCCATCATCG
TGTTCATCGCAAGCTTTCTGGTGCCGCTGGCCAAGCTCGGCATCCTGGCGGTGCTGTGCCTTTCGGTGCAGCAACGCTGG
CGCTGGAACCCGCGACTGCGCACGCGCCTGTATGCGCTGGTCGAAATCATCGGCCGTTGGTCGATGCTCGATGTATTTGT
GGTGACGCTGCTCGCAGGCCTTGTGCATCTGTCGACGCTGGCCATCATCAAACCCGGCCCTGGTGTCGGCCCGTTTGCCG
CCGTGGTGGTACTGACCATGTTCGCCGCCCGCTGTTTTGATCCCCGCCTGATCTGGGACGTCATCGACGAGCCCGATCCC
GAAGAGACCGATGTATGA

Upstream 100 bases:

>100_bases
GACCGTTCTGGCGCGAGATCGGCCTGACGCTGCCGCCGGGCTCACACATCGACGCGCCGACCGGCATGGACGCCGCGGCC
CGCCCCGGCGAGGATCGCCC

Downstream 100 bases:

>100_bases
CCGACCCCGTCGATAACGAAAACATTCCCGCGCCGCGCCGCATGAAGCGCAAGCGCTGGCTGCCCTCTCTGATCTGGCTG
GTGCCGATCGTGGCGCTTAC

Product: Paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNSATTPAPAQPGQEGRPLRAAAHGLVTCERCGLLARMPDSRAATQAVLTREYAPDDTAAAPVCPRCMSPMHVRKPDSLA
RCWALLIAAAAMYLPANLLPVMITDTLLGTQQDTIMSGIVYLWTSGSWHLAIIVFIASFLVPLAKLGILAVLCLSVQQRW
RWNPRLRTRLYALVEIIGRWSMLDVFVVTLLAGLVHLSTLAIIKPGPGVGPFAAVVVLTMFAARCFDPRLIWDVIDEPDP
EETDV

Sequences:

>Translated_245_residues
MNSATTPAPAQPGQEGRPLRAAAHGLVTCERCGLLARMPDSRAATQAVLTREYAPDDTAAAPVCPRCMSPMHVRKPDSLA
RCWALLIAAAAMYLPANLLPVMITDTLLGTQQDTIMSGIVYLWTSGSWHLAIIVFIASFLVPLAKLGILAVLCLSVQQRW
RWNPRLRTRLYALVEIIGRWSMLDVFVVTLLAGLVHLSTLAIIKPGPGVGPFAAVVVLTMFAARCFDPRLIWDVIDEPDP
EETDV
>Mature_245_residues
MNSATTPAPAQPGQEGRPLRAAAHGLVTCERCGLLARMPDSRAATQAVLTREYAPDDTAAAPVCPRCMSPMHVRKPDSLA
RCWALLIAAAAMYLPANLLPVMITDTLLGTQQDTIMSGIVYLWTSGSWHLAIIVFIASFLVPLAKLGILAVLCLSVQQRW
RWNPRLRTRLYALVEIIGRWSMLDVFVVTLLAGLVHLSTLAIIKPGPGVGPFAAVVVLTMFAARCFDPRLIWDVIDEPDP
EETDV

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=185, Percent_Identity=42.7027027027027, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1788137, Length=181, Percent_Identity=41.4364640883978, Blast_Score=134, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 26694; Mature: 26694

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS00392 DDC_GAD_HDC_YDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSATTPAPAQPGQEGRPLRAAAHGLVTCERCGLLARMPDSRAATQAVLTREYAPDDTAA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCC
APVCPRCMSPMHVRKPDSLARCWALLIAAAAMYLPANLLPVMITDTLLGTQQDTIMSGIV
CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YLWTSGSWHLAIIVFIASFLVPLAKLGILAVLCLSVQQRWRWNPRLRTRLYALVEIIGRW
HEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCH
SMLDVFVVTLLAGLVHLSTLAIIKPGPGVGPFAAVVVLTMFAARCFDPRLIWDVIDEPDP
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
EETDV
CCCCC
>Mature Secondary Structure
MNSATTPAPAQPGQEGRPLRAAAHGLVTCERCGLLARMPDSRAATQAVLTREYAPDDTAA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCC
APVCPRCMSPMHVRKPDSLARCWALLIAAAAMYLPANLLPVMITDTLLGTQQDTIMSGIV
CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YLWTSGSWHLAIIVFIASFLVPLAKLGILAVLCLSVQQRWRWNPRLRTRLYALVEIIGRW
HEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCH
SMLDVFVVTLLAGLVHLSTLAIIKPGPGVGPFAAVVVLTMFAARCFDPRLIWDVIDEPDP
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
EETDV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]