Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927546
Identifier: 187927546
GI number: 187927546
Start: 476387
End: 477463
Strand: Reverse
Name: 187927546
Synonym: Rpic_0446
Alternate gene names: NA
Gene position: 477463-476387 (Counterclockwise)
Preceding gene: 187927554
Following gene: 187927544
Centisome position: 12.11
GC content: 58.96
Gene sequence:
>1077_bases ATGCTGTCGACCGTTCTGGGCCGCCAACCGAATAGCGATGTTGCGCAACGTGAGCGATGGACCGACGAAGTCGCCTTGGC GCAATGGCTGGGCGAGCCAGTCGGCACCGTTGAAGGTTGGCGGCTGGAAGCCGCTGGCAAGCAGCAGTATCTCCTTGGGG CCGTGATCGACTGGCTGGACGGGCATATGGTCGCGCTCATGGGCTCCGAAGCGGGCACCGATGAGGATGCCACCCGCATT GCCGAAGCATGCTGGACAAGCCTGATCCCAGCTCTGGAAGTCGATGGTCACCTGATCGGCTTCTTCCGCAGCCTCCATCT TGAGATGGAGCCTCAAGGGTACGTGATCGTCTACGGCGACGACATGCGTGCTCTCGAGACAGCGAGACTCACGCCTGAAC ATGCCACCAATCTGATGGCAGGCTATCGGGCTCTGGCCGACTTTGCCCAGCAGCTTTCCACCTCACCGAACCAAGCTCTG GCAATCTGGCACGGCGTCCAAGATATCGTCTCGCCCCACCTGGCACTCCAGTTCTTCCTTGCTACCATCGGCCGAGATTA CGATGTGGCGATGGAGATCGTCGCCGGTCTGGACAATACGCTTCTACGCAGCCGCTGGCACCTCGGCTGCTGGCTATGGG AACTCCTGCTCAACCACGAGTTCAGCAACCTGAACGCCGGCACACTGCTGTCCGCTTTTGCGTTTGCCATCAGCCGGGGC ATCGACATCAATATCGTCAAAGGGAACAAAGACTCCTTGGGCTATCCCGTCTTCAACGGCACGGCAGCCCACTTGCTGGC CGACACGCATGGCGATCATTTCAGGGCGGATCTTCACCGTGGTTTCGACGAGCAAGTCTACAAGGAATTTCTTTGTGGTC TGCTAGGTCGCAGCCTCGATATAGACCTCGCCAATTTCGGCGGGCTAACTGCTCGCGACATCGACGAGTCAGTGCAGAGC AAACATGGCCGTCGCAATCCCTTCGGCAAAGTTCTCAACGCCTACATGCTGCACGACAAGCTGGCCGATACGCTACCCGA CAACAAGCCCGGTAAGCCCGGCAAGCAACTCATCTAA
Upstream 100 bases:
>100_bases CTCTCGATCCGTCATGACTGCGCTTGAATTCCTGGCAAGACTCCGCCTGCTTCCAGCATCGACGCCGCTGAGTCTGCCGC ACGTCGCTGCCGCGCTTGAA
Downstream 100 bases:
>100_bases CCAAACGGGTCGGCGCGCTTACCGTCCGACCCAAACCGAGTGAGCGCACGTGCAGCAGCGGTGACATTGCCCTGCTGTAT GTGATGATCTTCCGCGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MLSTVLGRQPNSDVAQRERWTDEVALAQWLGEPVGTVEGWRLEAAGKQQYLLGAVIDWLDGHMVALMGSEAGTDEDATRI AEACWTSLIPALEVDGHLIGFFRSLHLEMEPQGYVIVYGDDMRALETARLTPEHATNLMAGYRALADFAQQLSTSPNQAL AIWHGVQDIVSPHLALQFFLATIGRDYDVAMEIVAGLDNTLLRSRWHLGCWLWELLLNHEFSNLNAGTLLSAFAFAISRG IDINIVKGNKDSLGYPVFNGTAAHLLADTHGDHFRADLHRGFDEQVYKEFLCGLLGRSLDIDLANFGGLTARDIDESVQS KHGRRNPFGKVLNAYMLHDKLADTLPDNKPGKPGKQLI
Sequences:
>Translated_358_residues MLSTVLGRQPNSDVAQRERWTDEVALAQWLGEPVGTVEGWRLEAAGKQQYLLGAVIDWLDGHMVALMGSEAGTDEDATRI AEACWTSLIPALEVDGHLIGFFRSLHLEMEPQGYVIVYGDDMRALETARLTPEHATNLMAGYRALADFAQQLSTSPNQAL AIWHGVQDIVSPHLALQFFLATIGRDYDVAMEIVAGLDNTLLRSRWHLGCWLWELLLNHEFSNLNAGTLLSAFAFAISRG IDINIVKGNKDSLGYPVFNGTAAHLLADTHGDHFRADLHRGFDEQVYKEFLCGLLGRSLDIDLANFGGLTARDIDESVQS KHGRRNPFGKVLNAYMLHDKLADTLPDNKPGKPGKQLI >Mature_358_residues MLSTVLGRQPNSDVAQRERWTDEVALAQWLGEPVGTVEGWRLEAAGKQQYLLGAVIDWLDGHMVALMGSEAGTDEDATRI AEACWTSLIPALEVDGHLIGFFRSLHLEMEPQGYVIVYGDDMRALETARLTPEHATNLMAGYRALADFAQQLSTSPNQAL AIWHGVQDIVSPHLALQFFLATIGRDYDVAMEIVAGLDNTLLRSRWHLGCWLWELLLNHEFSNLNAGTLLSAFAFAISRG IDINIVKGNKDSLGYPVFNGTAAHLLADTHGDHFRADLHRGFDEQVYKEFLCGLLGRSLDIDLANFGGLTARDIDESVQS KHGRRNPFGKVLNAYMLHDKLADTLPDNKPGKPGKQLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39569; Mature: 39569
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTVLGRQPNSDVAQRERWTDEVALAQWLGEPVGTVEGWRLEAAGKQQYLLGAVIDWLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHC GHMVALMGSEAGTDEDATRIAEACWTSLIPALEVDGHLIGFFRSLHLEMEPQGYVIVYGD CCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHEEECCCCEEEEECC DMRALETARLTPEHATNLMAGYRALADFAQQLSTSPNQALAIWHGVQDIVSPHLALQFFL CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHH ATIGRDYDVAMEIVAGLDNTLLRSRWHLGCWLWELLLNHEFSNLNAGTLLSAFAFAISRG HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC IDINIVKGNKDSLGYPVFNGTAAHLLADTHGDHFRADLHRGFDEQVYKEFLCGLLGRSLD CEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCC IDLANFGGLTARDIDESVQSKHGRRNPFGKVLNAYMLHDKLADTLPDNKPGKPGKQLI EEHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLSTVLGRQPNSDVAQRERWTDEVALAQWLGEPVGTVEGWRLEAAGKQQYLLGAVIDWLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHC GHMVALMGSEAGTDEDATRIAEACWTSLIPALEVDGHLIGFFRSLHLEMEPQGYVIVYGD CCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHEEECCCCEEEEECC DMRALETARLTPEHATNLMAGYRALADFAQQLSTSPNQALAIWHGVQDIVSPHLALQFFL CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHH ATIGRDYDVAMEIVAGLDNTLLRSRWHLGCWLWELLLNHEFSNLNAGTLLSAFAFAISRG HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC IDINIVKGNKDSLGYPVFNGTAAHLLADTHGDHFRADLHRGFDEQVYKEFLCGLLGRSLD CEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCC IDLANFGGLTARDIDESVQSKHGRRNPFGKVLNAYMLHDKLADTLPDNKPGKPGKQLI EEHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA