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The map label for this gene is 187927541

Identifier: 187927541

GI number: 187927541

Start: 471980

End: 472939

Strand: Direct

Name: 187927541

Synonym: Rpic_0441

Alternate gene names: NA

Gene position: 471980-472939 (Clockwise)

Preceding gene: 187927540

Following gene: 187927545

Centisome position: 11.97

GC content: 55.73

Gene sequence:

>960_bases
ATGGAGCAGGCACGATACGATTTCTACACTCACCTCAACGAAGCCGTCGTCACCACGAACGACTTTTCTGAAGGCACCAA
ATTCCGCAAGCGCGAGAAGGTCGATCAGTTCGCATACTGCGGCCTCAATCCAATGTATCGGAGCTACCTGAGCTTCGACC
TCGACATGCCAGGTTCGGCATTCCGCTTCGAGGATGCACATCTGCCTCCGCCCACGATCATCACGATCAATCCCGAGAAC
GCGCATTGCCACATGCTGTACCGTCTGGTGACACCCGTGGCTTTCACGAAGAACGCTCGCAGCGGTCCGCAGGACTATTT
CGGAGCGATCCAGCGCGAGATGGAAAGGCGACTCGGTGCTGACACCGCGTACAACCACACGATCACCAAGAATCCGTTGA
ATCCTCGCTGGAAGGTCATTACCCATCCCGCCGCGAAATACCATCTTGGCGATTTTCTCGAATGGATCGATCTGCCAAGC
GCTCGCATCGCTGTTCCCGGTAACACGGTCTACAAGGGCAGAAATCACCAGCTATTCGATACGCTGCTCCGTTGGGCATA
CGGAGCCGTCCATGCGCATGCGGACGAACAACGCTGGTATGCCACCGTGCATGCGAAGGCTGAAGAGATCAATGCCATTT
TCACGCAACCCCTTGGGTTTTCCGAAGTCAGGGCCACGGCCAGATCGACAGCCAAACGGGTATGGCAGCGTCGTCACGAG
CCACACCATTCCCGTCCACGCATCTTGACGTTTACCGATGAATCATCGGAAGAACGCATGCGTCAGGGAGCAGCCTATAC
CAATGCCATTCGCCGTGAGAAATCGTTACAAACGCTGCAAGAAGCGTTCAACGCCTTGCGTATCGAGCACGGTGATCAGA
TCACTGTCCGCCAGCTCGTGGACCATACGGCCATGAACATCAAGACCGTGCGCAAGTACCTTCCCCAGATCGTTCGATAG

Upstream 100 bases:

>100_bases
ACGTAGGTGAAGATGATCTATATGTGATTGATCTGTCTGGACTGCTTGACTTCTGACCAGAAATTTTGTTTGTTGTGTAC
TGTCACAACGAACAAGAAGG

Downstream 100 bases:

>100_bases
AGGCCGATGCCTCATTCCTGAGATGGAGGCTACCGTGTCGAGACCATTACGGCGTACAACAGGTAATTAGCCGACATCGC
TGCCGACGCGATAGCGTGCC

Product: plasmid replicase

Products: NA

Alternate protein names: Replicase; Rep Protein; Replication Initiation Protein A; RepA Protein; Replication Protein A; Replication Protein; Replication Protein RepA; Replication Primase; Plasmid Replicase Protein; Plasmid Replication Protein RepA; Replication Primase Protein

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MEQARYDFYTHLNEAVVTTNDFSEGTKFRKREKVDQFAYCGLNPMYRSYLSFDLDMPGSAFRFEDAHLPPPTIITINPEN
AHCHMLYRLVTPVAFTKNARSGPQDYFGAIQREMERRLGADTAYNHTITKNPLNPRWKVITHPAAKYHLGDFLEWIDLPS
ARIAVPGNTVYKGRNHQLFDTLLRWAYGAVHAHADEQRWYATVHAKAEEINAIFTQPLGFSEVRATARSTAKRVWQRRHE
PHHSRPRILTFTDESSEERMRQGAAYTNAIRREKSLQTLQEAFNALRIEHGDQITVRQLVDHTAMNIKTVRKYLPQIVR

Sequences:

>Translated_319_residues
MEQARYDFYTHLNEAVVTTNDFSEGTKFRKREKVDQFAYCGLNPMYRSYLSFDLDMPGSAFRFEDAHLPPPTIITINPEN
AHCHMLYRLVTPVAFTKNARSGPQDYFGAIQREMERRLGADTAYNHTITKNPLNPRWKVITHPAAKYHLGDFLEWIDLPS
ARIAVPGNTVYKGRNHQLFDTLLRWAYGAVHAHADEQRWYATVHAKAEEINAIFTQPLGFSEVRATARSTAKRVWQRRHE
PHHSRPRILTFTDESSEERMRQGAAYTNAIRREKSLQTLQEAFNALRIEHGDQITVRQLVDHTAMNIKTVRKYLPQIVR
>Mature_319_residues
MEQARYDFYTHLNEAVVTTNDFSEGTKFRKREKVDQFAYCGLNPMYRSYLSFDLDMPGSAFRFEDAHLPPPTIITINPEN
AHCHMLYRLVTPVAFTKNARSGPQDYFGAIQREMERRLGADTAYNHTITKNPLNPRWKVITHPAAKYHLGDFLEWIDLPS
ARIAVPGNTVYKGRNHQLFDTLLRWAYGAVHAHADEQRWYATVHAKAEEINAIFTQPLGFSEVRATARSTAKRVWQRRHE
PHHSRPRILTFTDESSEERMRQGAAYTNAIRREKSLQTLQEAFNALRIEHGDQITVRQLVDHTAMNIKTVRKYLPQIVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37052; Mature: 37052

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQARYDFYTHLNEAVVTTNDFSEGTKFRKREKVDQFAYCGLNPMYRSYLSFDLDMPGSA
CCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
FRFEDAHLPPPTIITINPENAHCHMLYRLVTPVAFTKNARSGPQDYFGAIQREMERRLGA
EEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
DTAYNHTITKNPLNPRWKVITHPAAKYHLGDFLEWIDLPSARIAVPGNTVYKGRNHQLFD
CCCCCCCEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCHHHH
TLLRWAYGAVHAHADEQRWYATVHAKAEEINAIFTQPLGFSEVRATARSTAKRVWQRRHE
HHHHHHHHHHHCCCCCHHEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PHHSRPRILTFTDESSEERMRQGAAYTNAIRREKSLQTLQEAFNALRIEHGDQITVRQLV
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
DHTAMNIKTVRKYLPQIVR
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEQARYDFYTHLNEAVVTTNDFSEGTKFRKREKVDQFAYCGLNPMYRSYLSFDLDMPGSA
CCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
FRFEDAHLPPPTIITINPENAHCHMLYRLVTPVAFTKNARSGPQDYFGAIQREMERRLGA
EEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
DTAYNHTITKNPLNPRWKVITHPAAKYHLGDFLEWIDLPSARIAVPGNTVYKGRNHQLFD
CCCCCCCEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCHHHH
TLLRWAYGAVHAHADEQRWYATVHAKAEEINAIFTQPLGFSEVRATARSTAKRVWQRRHE
HHHHHHHHHHHCCCCCHHEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PHHSRPRILTFTDESSEERMRQGAAYTNAIRREKSLQTLQEAFNALRIEHGDQITVRQLV
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
DHTAMNIKTVRKYLPQIVR
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA