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The map label for this gene is 187927538

Identifier: 187927538

GI number: 187927538

Start: 467686

End: 469287

Strand: Reverse

Name: 187927538

Synonym: Rpic_0438

Alternate gene names: NA

Gene position: 469287-467686 (Counterclockwise)

Preceding gene: 187927542

Following gene: 187927535

Centisome position: 11.9

GC content: 62.92

Gene sequence:

>1602_bases
ATGCAAAAACAGAATTACCTCGTTCGCCGCGAGTCCAGCGCGCACTACTATTTCCGACGCGCCGTCCCGCCACACCTGCG
CGCCTCGCTCGGCAAGCGCGAAATCGTCATCTCACTGCGCACCCGCGACCGGCGCACCGCCGAAGTCCGCGCGCGACAGC
ACGCCGTCAGTACCGATGCCGAATTCCTGCTGCACGAGCAACTCGTGCACAATCAGGGCAACGCGCATCCCGACGAGACC
GTCGGGCTTTCCCGGCCACTGGAACCTCAACACATCCCAACCCTCGCCGAGCGCTACCACGAAACGCTGGTCGCCACGCA
CCTAGAACACCCGCCTACCAGGGCCGAGTTGGCCGACATGCGTACCTGGTACAGGCAACTGGAATCGGAGCTGACCGACG
CCGCCGTGCTCGGCGACACCAGCTTTGTGGAAGACGCTGGCCAGGCGCACCTGGCGGCCGAGGGCTTCAATCCGGCGCTG
ACCGCGCCCGCCACGCTTCACCTGTACTACCAGCGCCTGCTGCACGCCGACCTCGTCGCGATTAGGCAGCAGTTGCAGCA
CTTGTCGGGCGCCCCCATCGAGAAGCCGAAGGTGCGTCCCTCCCCGCTCGAAGGCGACAACTGGGAGGCGATGCTGGAGT
GCTGGAAGGCTGAACGCGCGCCGGGTGACAAGACGTGGGATGAAGCCAACCGGCTCGTGAACAGGTTCCGGACGTTTTCG
AACGACCTCTCGCCTCTCGACATCACGACGGAGCTCGTCGAGGCCTTTCGCGACAGCCTGCTGCAGGAAGGCCTGTCCCG
CCAGCGAGTCAAGACGATTCTGTCGCTGCTGCGTCCGGTGGTGGGCACCGCTATCGAGATGAAGCGGTGCAGCCTGACAG
GCAACCCGTTCGCCGACGTGAAAATCAATGTGCCCAAACGCGCGGCCGGCAAGGAACAGCGGCAACCGTTTGAACTCGAG
CACCTGCAGGCGCTCTTCCGTAGTCCGGTCTACACCGACGGGCTGCGCCCCAAGAAAGGGGGCGGCGATGCAGCGTTCTG
GCTGCCGCTGCTGGGTCTGTTTGGTGGACCGCGCGCCGAAGAGCTCGGGCAGTTGCGCGTGACTGACGTGCTGCGTCGGG
ATGGTCAGCTCTATCTGCGCATCTCGGAGCTGGGCGAGGACCAGGAACTCAAAACGCTCGCCTCGGAGCGAATGGTGCCC
GTACATGAAGAACTGCTGCGTATCGGCTTCGAGAGCTATGTTGAAACCATGCGTGAGCGCGGTGAACAGCGCCTGTTCCC
CGGACTCAAGGCTGACCGTTACGGCAACTACACCAAGATGTTCTCGACCTGGTGCAACGAGTACATCGATACCTACGTCG
TGGACGACAAGCGCTATGCATACCACTCGTTCCGGCATTGTTTCGAGGAATTCGCCGGCTGGAGTGGTCTGACGCAGTAT
CAGATTGATGGGATTCTGGGCCATTCGCCGCAGGGCATGGCCAAGCTGTATGGGAAGAAGTCAGGCAGCCGTCGGACGTT
CAATCCGAAGGTGCTGGCCGAGGGCATGGCGAAGTATCACGTCGAGGGCCTCGACCTGAGCCACCTGTATGGCAGCTACT
AG

Upstream 100 bases:

>100_bases
TTAGGCGAAGGCTAAAACCGCTGGCTACAGGTCTGGACTGCTACAACGCACTGCTACAAGGCGTCGCGTGGCAGGCCCTT
AACGACCAGACTTGAAGACC

Downstream 100 bases:

>100_bases
GCAATCCGGCGCAAATGGTCTTGACCGTTTACGCCCGCAGGAACGCCGCCCCTTTTTGCGATTCCAGCGACGGGCGGCTG
GCGAAAAAGGCATGACGTCG

Product: phage integrase

Products: NA

Alternate protein names: Integrase; Phage-Related Integrase; Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Integrase/Resolvase Recombinase Protein; Integrase Domain-Containing Protein; Integrase Domain Protein SAM Domain Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MQKQNYLVRRESSAHYYFRRAVPPHLRASLGKREIVISLRTRDRRTAEVRARQHAVSTDAEFLLHEQLVHNQGNAHPDET
VGLSRPLEPQHIPTLAERYHETLVATHLEHPPTRAELADMRTWYRQLESELTDAAVLGDTSFVEDAGQAHLAAEGFNPAL
TAPATLHLYYQRLLHADLVAIRQQLQHLSGAPIEKPKVRPSPLEGDNWEAMLECWKAERAPGDKTWDEANRLVNRFRTFS
NDLSPLDITTELVEAFRDSLLQEGLSRQRVKTILSLLRPVVGTAIEMKRCSLTGNPFADVKINVPKRAAGKEQRQPFELE
HLQALFRSPVYTDGLRPKKGGGDAAFWLPLLGLFGGPRAEELGQLRVTDVLRRDGQLYLRISELGEDQELKTLASERMVP
VHEELLRIGFESYVETMRERGEQRLFPGLKADRYGNYTKMFSTWCNEYIDTYVVDDKRYAYHSFRHCFEEFAGWSGLTQY
QIDGILGHSPQGMAKLYGKKSGSRRTFNPKVLAEGMAKYHVEGLDLSHLYGSY

Sequences:

>Translated_533_residues
MQKQNYLVRRESSAHYYFRRAVPPHLRASLGKREIVISLRTRDRRTAEVRARQHAVSTDAEFLLHEQLVHNQGNAHPDET
VGLSRPLEPQHIPTLAERYHETLVATHLEHPPTRAELADMRTWYRQLESELTDAAVLGDTSFVEDAGQAHLAAEGFNPAL
TAPATLHLYYQRLLHADLVAIRQQLQHLSGAPIEKPKVRPSPLEGDNWEAMLECWKAERAPGDKTWDEANRLVNRFRTFS
NDLSPLDITTELVEAFRDSLLQEGLSRQRVKTILSLLRPVVGTAIEMKRCSLTGNPFADVKINVPKRAAGKEQRQPFELE
HLQALFRSPVYTDGLRPKKGGGDAAFWLPLLGLFGGPRAEELGQLRVTDVLRRDGQLYLRISELGEDQELKTLASERMVP
VHEELLRIGFESYVETMRERGEQRLFPGLKADRYGNYTKMFSTWCNEYIDTYVVDDKRYAYHSFRHCFEEFAGWSGLTQY
QIDGILGHSPQGMAKLYGKKSGSRRTFNPKVLAEGMAKYHVEGLDLSHLYGSY
>Mature_533_residues
MQKQNYLVRRESSAHYYFRRAVPPHLRASLGKREIVISLRTRDRRTAEVRARQHAVSTDAEFLLHEQLVHNQGNAHPDET
VGLSRPLEPQHIPTLAERYHETLVATHLEHPPTRAELADMRTWYRQLESELTDAAVLGDTSFVEDAGQAHLAAEGFNPAL
TAPATLHLYYQRLLHADLVAIRQQLQHLSGAPIEKPKVRPSPLEGDNWEAMLECWKAERAPGDKTWDEANRLVNRFRTFS
NDLSPLDITTELVEAFRDSLLQEGLSRQRVKTILSLLRPVVGTAIEMKRCSLTGNPFADVKINVPKRAAGKEQRQPFELE
HLQALFRSPVYTDGLRPKKGGGDAAFWLPLLGLFGGPRAEELGQLRVTDVLRRDGQLYLRISELGEDQELKTLASERMVP
VHEELLRIGFESYVETMRERGEQRLFPGLKADRYGNYTKMFSTWCNEYIDTYVVDDKRYAYHSFRHCFEEFAGWSGLTQY
QIDGILGHSPQGMAKLYGKKSGSRRTFNPKVLAEGMAKYHVEGLDLSHLYGSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60839; Mature: 60839

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQNYLVRRESSAHYYFRRAVPPHLRASLGKREIVISLRTRDRRTAEVRARQHAVSTDA
CCCCCCEEEECCCCCEEEECCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCHH
EFLLHEQLVHNQGNAHPDETVGLSRPLEPQHIPTLAERYHETLVATHLEHPPTRAELADM
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
RTWYRQLESELTDAAVLGDTSFVEDAGQAHLAAEGFNPALTAPATLHLYYQRLLHADLVA
HHHHHHHHHHHHHHHHHCCCHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
IRQQLQHLSGAPIEKPKVRPSPLEGDNWEAMLECWKAERAPGDKTWDEANRLVNRFRTFS
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NDLSPLDITTELVEAFRDSLLQEGLSRQRVKTILSLLRPVVGTAIEMKRCSLTGNPFADV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
KINVPKRAAGKEQRQPFELEHLQALFRSPVYTDGLRPKKGGGDAAFWLPLLGLFGGPRAE
EEECCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
ELGQLRVTDVLRRDGQLYLRISELGEDQELKTLASERMVPVHEELLRIGFESYVETMRER
HHHHHHHHHHHHCCCCEEEEHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GEQRLFPGLKADRYGNYTKMFSTWCNEYIDTYVVDDKRYAYHSFRHCFEEFAGWSGLTQY
CHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCCHH
QIDGILGHSPQGMAKLYGKKSGSRRTFNPKVLAEGMAKYHVEGLDLSHLYGSY
EECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MQKQNYLVRRESSAHYYFRRAVPPHLRASLGKREIVISLRTRDRRTAEVRARQHAVSTDA
CCCCCCEEEECCCCCEEEECCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCHH
EFLLHEQLVHNQGNAHPDETVGLSRPLEPQHIPTLAERYHETLVATHLEHPPTRAELADM
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
RTWYRQLESELTDAAVLGDTSFVEDAGQAHLAAEGFNPALTAPATLHLYYQRLLHADLVA
HHHHHHHHHHHHHHHHHCCCHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
IRQQLQHLSGAPIEKPKVRPSPLEGDNWEAMLECWKAERAPGDKTWDEANRLVNRFRTFS
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NDLSPLDITTELVEAFRDSLLQEGLSRQRVKTILSLLRPVVGTAIEMKRCSLTGNPFADV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
KINVPKRAAGKEQRQPFELEHLQALFRSPVYTDGLRPKKGGGDAAFWLPLLGLFGGPRAE
EEECCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
ELGQLRVTDVLRRDGQLYLRISELGEDQELKTLASERMVPVHEELLRIGFESYVETMRER
HHHHHHHHHHHHCCCCEEEEHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GEQRLFPGLKADRYGNYTKMFSTWCNEYIDTYVVDDKRYAYHSFRHCFEEFAGWSGLTQY
CHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCCHH
QIDGILGHSPQGMAKLYGKKSGSRRTFNPKVLAEGMAKYHVEGLDLSHLYGSY
EECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA