Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927513
Identifier: 187927513
GI number: 187927513
Start: 436670
End: 437668
Strand: Reverse
Name: 187927513
Synonym: Rpic_0410
Alternate gene names: NA
Gene position: 437668-436670 (Counterclockwise)
Preceding gene: 187927514
Following gene: 187927512
Centisome position: 11.1
GC content: 71.27
Gene sequence:
>999_bases ATGAGCCAGCCTTCCATCGCCATCGTCGGAGCCGGCATTGCCGGTGTTGCCTGTGCCAACGCGCTTGCCGCAGAAGGCAT TGCCACCACGGTCTATGAGCGCGCTGGCGGTGTCGGGGGCCGGCTGGCCACCACGGTGCTGCCCGAGTCCGCCCCGGCGT ATGCGTTCGACCATGGTGCGCAGTCGTTCAACGTGCGCAGCGAGGTCTTCCGGCGCGCGGTGGATGCCGCTGGCCGTCAG GGCTCGGTGCTGCCGTGGCCCGCGCGCTGGGGCCATCGCACGATCGACGCCCTGCAAGCCGACTCGCGCGACGAAGCCCG CTACGTCGGCCTGCCCGGCATGGGCGCGCTGGTGCGCAGCCTGGCCGCGCCGCTGGATGTGCGCTTCGGCCACGCCGTCA CGCGTGTGGCGCACGATGGCCGGCGCTGGACGATCGAGCGCAATGGCACCGACGCCGCCCACGCCGACTTCCTCGCCCTG GCCCTGCCCGCGCCCGAACTGTCCGCACTGTTTCACGGCGCCACGCCAGCCTCGCTGCAGGAAGCCATCGCGCCGGTGCA CTACGCCCCGTGCTGGGCGCTGATGATGGGCTTTGCGCAACCGCTCGGCTTGCCGTATGACGGCATCCGCATCGACGACG ACGTGCTCGCCTGGGCCGCCCGCGACAACAGCAAGCCGGGCCGCGTCATGGTCGATGAATCCTGGGTGGTGCATGCGTCG CCGGGCTGGTCGGCCGCACATGCCCAGGACACCCCCGAGCAGGCGGTGCACGCCATGCACGCCCGCTTTGCCGAAGCCTT CCCGGGCACGCCTCAGCCCGATGTGATGGCCGCGCACTTGTGGCCGCACGCGCTGGTCGAGCAGTCCGCTGGTGTGCCCT GCCACTGGGACGCCGCCGCCCGCCTGGGTGCCTGCGGTGACTGGTGCGAAGGCCCGCGCGTGGAAGCCGCGTTCCTGAGC GGTATTGCGCTGGCCGCCAAGATTGCCGAAGCGCTATAA
Upstream 100 bases:
>100_bases TTTTTCATTGGGGCGCGACCCGATATCATGGCGGACTACTACGACGCGCCGTTTGACGCGCCGATTTCCGGATTCCTCGC CCCGAACCCACCTCACATCC
Downstream 100 bases:
>100_bases GACTTCGCCCCGGAACGCTACAATATCGGGTTGTCTCGTGTTTCGTGTGCCGGGTCGCTCACCCGGCGGTGGCTTTCTCC TGACGATGCCATGCGCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Amine Oxidase Flavin-Containing; Amine Oxidase; Deoxyribodipyrimidine Photolyase; NAD/Fad-Dependent Oxidoreductase Protein; NAD/FAD-Dependent Oxidoreductase; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSQPSIAIVGAGIAGVACANALAAEGIATTVYERAGGVGGRLATTVLPESAPAYAFDHGAQSFNVRSEVFRRAVDAAGRQ GSVLPWPARWGHRTIDALQADSRDEARYVGLPGMGALVRSLAAPLDVRFGHAVTRVAHDGRRWTIERNGTDAAHADFLAL ALPAPELSALFHGATPASLQEAIAPVHYAPCWALMMGFAQPLGLPYDGIRIDDDVLAWAARDNSKPGRVMVDESWVVHAS PGWSAAHAQDTPEQAVHAMHARFAEAFPGTPQPDVMAAHLWPHALVEQSAGVPCHWDAAARLGACGDWCEGPRVEAAFLS GIALAAKIAEAL
Sequences:
>Translated_332_residues MSQPSIAIVGAGIAGVACANALAAEGIATTVYERAGGVGGRLATTVLPESAPAYAFDHGAQSFNVRSEVFRRAVDAAGRQ GSVLPWPARWGHRTIDALQADSRDEARYVGLPGMGALVRSLAAPLDVRFGHAVTRVAHDGRRWTIERNGTDAAHADFLAL ALPAPELSALFHGATPASLQEAIAPVHYAPCWALMMGFAQPLGLPYDGIRIDDDVLAWAARDNSKPGRVMVDESWVVHAS PGWSAAHAQDTPEQAVHAMHARFAEAFPGTPQPDVMAAHLWPHALVEQSAGVPCHWDAAARLGACGDWCEGPRVEAAFLS GIALAAKIAEAL >Mature_331_residues SQPSIAIVGAGIAGVACANALAAEGIATTVYERAGGVGGRLATTVLPESAPAYAFDHGAQSFNVRSEVFRRAVDAAGRQG SVLPWPARWGHRTIDALQADSRDEARYVGLPGMGALVRSLAAPLDVRFGHAVTRVAHDGRRWTIERNGTDAAHADFLALA LPAPELSALFHGATPASLQEAIAPVHYAPCWALMMGFAQPLGLPYDGIRIDDDVLAWAARDNSKPGRVMVDESWVVHASP GWSAAHAQDTPEQAVHAMHARFAEAFPGTPQPDVMAAHLWPHALVEQSAGVPCHWDAAARLGACGDWCEGPRVEAAFLSG IALAAKIAEAL
Specific function: Unknown
COG id: COG3380
COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34912; Mature: 34780
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPSIAIVGAGIAGVACANALAAEGIATTVYERAGGVGGRLATTVLPESAPAYAFDHGA CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHCCC QSFNVRSEVFRRAVDAAGRQGSVLPWPARWGHRTIDALQADSRDEARYVGLPGMGALVRS CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHH LAAPLDVRFGHAVTRVAHDGRRWTIERNGTDAAHADFLALALPAPELSALFHGATPASLQ HHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHCEEEEECCCHHHHHHHCCCCHHHHH EAIAPVHYAPCWALMMGFAQPLGLPYDGIRIDDDVLAWAARDNSKPGRVMVDESWVVHAS HHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHEEEEECCCCCCCEEEEECCEEEECC PGWSAAHAQDTPEQAVHAMHARFAEAFPGTPQPDVMAAHLWPHALVEQSAGVPCHWDAAA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHH RLGACGDWCEGPRVEAAFLSGIALAAKIAEAL HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SQPSIAIVGAGIAGVACANALAAEGIATTVYERAGGVGGRLATTVLPESAPAYAFDHGA CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHCCC QSFNVRSEVFRRAVDAAGRQGSVLPWPARWGHRTIDALQADSRDEARYVGLPGMGALVRS CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHH LAAPLDVRFGHAVTRVAHDGRRWTIERNGTDAAHADFLALALPAPELSALFHGATPASLQ HHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHCEEEEECCCHHHHHHHCCCCHHHHH EAIAPVHYAPCWALMMGFAQPLGLPYDGIRIDDDVLAWAARDNSKPGRVMVDESWVVHAS HHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHEEEEECCCCCCCEEEEECCEEEECC PGWSAAHAQDTPEQAVHAMHARFAEAFPGTPQPDVMAAHLWPHALVEQSAGVPCHWDAAA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHH RLGACGDWCEGPRVEAAFLSGIALAAKIAEAL HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA