Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927471
Identifier: 187927471
GI number: 187927471
Start: 392783
End: 393538
Strand: Direct
Name: 187927471
Synonym: Rpic_0368
Alternate gene names: NA
Gene position: 392783-393538 (Clockwise)
Preceding gene: 187927470
Following gene: 187927472
Centisome position: 9.96
GC content: 64.68
Gene sequence:
>756_bases ATGAAGGCGCGTCGCTTGTTGCGCCGCGCTTCCGTGCTCGCTCCGAACGTCACAGTACGTTCGCGTCTGCCTTGGCCGGT GACGGTGTTGCTGGTTGCAGTGGTACTTGGGCTTGCGGCCGCAGCGGCGCTGTGGGCCTTCGAGGAAGGGCGCCGTCTGA CCGGTCCGCACGACGCCGATTTGCGTGCAATGAACCGCGAGCTGACCGCCAGGCTGGCCGCCGTGCAGGCCGAACGCGAT AAGCTTTCTGCATCCGCCGGCACCGTGGATGCCCGTCTGGGTATCGCTGAAGGCGCTCAGGCGCAAATGGCCGAGCAACT CAAGGCGCTGGAAACCGAAAACGCGCAGTTGAAGGAAGATCTGGCTTTCTTTGACAGCCTGTTGCCCGCGCCCACCAATT CCGCGGGCATTTACGTGCGCAGCTTCCGCATCGCGCCGGACGAGGCGCAACCGACGCGCATGCGGTTCCGCGTTCTGTTG ATGCAGGGCGGGGGCAAGGCGTTCGCACCCGTCTCCGAATTCGAGGGGCAATTGGCGCTCACGCTCAACGTGGTGCAGGC TGGCAAACCTGCTACGATCGATTTCCCGGGCGCTGCGGCCAGCGGATCACCCGCCACCAGCGCCCGCGTCAAGCTCACGC ACTACCAGCGCCTCGAGGGCTGGGTGGACGTGCCCCCGGGCACCACGGTGCAGTCGGTGATGGTGAAAGTGCTGCAGAAC GGCAAGATCAAAGCGAGCCAGAGTTTTTCCATCTGA
Upstream 100 bases:
>100_bases GACTACAATTCACATCTCGTTAGCGTTCGCCCCGTATGATGCAATCCGCTATTTCTCCTAATCCGATTCTGATTCGTAAC GCGGGTCAGGAGGCGGGCGC
Downstream 100 bases:
>100_bases CGGGCATTGTCCTGTCGAGGATCTGTACACAGAGGAGTCGACGATGCTGTTTGGCAAAAAGAAAGGGCTGGCGATTGAAA CGCTACTGGGGGCCCGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKARRLLRRASVLAPNVTVRSRLPWPVTVLLVAVVLGLAAAAALWAFEEGRRLTGPHDADLRAMNRELTARLAAVQAERD KLSASAGTVDARLGIAEGAQAQMAEQLKALETENAQLKEDLAFFDSLLPAPTNSAGIYVRSFRIAPDEAQPTRMRFRVLL MQGGGKAFAPVSEFEGQLALTLNVVQAGKPATIDFPGAAASGSPATSARVKLTHYQRLEGWVDVPPGTTVQSVMVKVLQN GKIKASQSFSI
Sequences:
>Translated_251_residues MKARRLLRRASVLAPNVTVRSRLPWPVTVLLVAVVLGLAAAAALWAFEEGRRLTGPHDADLRAMNRELTARLAAVQAERD KLSASAGTVDARLGIAEGAQAQMAEQLKALETENAQLKEDLAFFDSLLPAPTNSAGIYVRSFRIAPDEAQPTRMRFRVLL MQGGGKAFAPVSEFEGQLALTLNVVQAGKPATIDFPGAAASGSPATSARVKLTHYQRLEGWVDVPPGTTVQSVMVKVLQN GKIKASQSFSI >Mature_251_residues MKARRLLRRASVLAPNVTVRSRLPWPVTVLLVAVVLGLAAAAALWAFEEGRRLTGPHDADLRAMNRELTARLAAVQAERD KLSASAGTVDARLGIAEGAQAQMAEQLKALETENAQLKEDLAFFDSLLPAPTNSAGIYVRSFRIAPDEAQPTRMRFRVLL MQGGGKAFAPVSEFEGQLALTLNVVQAGKPATIDFPGAAASGSPATSARVKLTHYQRLEGWVDVPPGTTVQSVMVKVLQN GKIKASQSFSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26866; Mature: 26866
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: PS50057 FERM_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARRLLRRASVLAPNVTVRSRLPWPVTVLLVAVVLGLAAAAALWAFEEGRRLTGPHDAD CCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH LRAMNRELTARLAAVQAERDKLSASAGTVDARLGIAEGAQAQMAEQLKALETENAQLKED HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH LAFFDSLLPAPTNSAGIYVRSFRIAPDEAQPTRMRFRVLLMQGGGKAFAPVSEFEGQLAL HHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHEEEEEEEEECCCCCCCCHHHCCCEEEE TLNVVQAGKPATIDFPGAAASGSPATSARVKLTHYQRLEGWVDVPPGTTVQSVMVKVLQN EEEEEECCCCCEEECCCCCCCCCCCCCEEEEEHHHHHCCCCEECCCCCCHHHHHHHHHHC GKIKASQSFSI CCCCCCCCCCC >Mature Secondary Structure MKARRLLRRASVLAPNVTVRSRLPWPVTVLLVAVVLGLAAAAALWAFEEGRRLTGPHDAD CCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH LRAMNRELTARLAAVQAERDKLSASAGTVDARLGIAEGAQAQMAEQLKALETENAQLKED HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH LAFFDSLLPAPTNSAGIYVRSFRIAPDEAQPTRMRFRVLLMQGGGKAFAPVSEFEGQLAL HHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHEEEEEEEEECCCCCCCCHHHCCCEEEE TLNVVQAGKPATIDFPGAAASGSPATSARVKLTHYQRLEGWVDVPPGTTVQSVMVKVLQN EEEEEECCCCCEEECCCCCCCCCCCCCEEEEEHHHHHCCCCEECCCCCCHHHHHHHHHHC GKIKASQSFSI CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA