Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010682 |
Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is gltI [H]
Identifier: 187927460
GI number: 187927460
Start: 382692
End: 383600
Strand: Direct
Name: gltI [H]
Synonym: Rpic_0357
Alternate gene names: 187927460
Gene position: 382692-383600 (Clockwise)
Preceding gene: 187927459
Following gene: 187927461
Centisome position: 9.71
GC content: 59.63
Gene sequence:
>909_bases ATGAACCTCGCCAAGCTGGCAACCGTGGTTGCTGCCGTTGGTGTCGCCGTTGGTGCGTTCGGCAGCGCTGCCCACGCAGA AGAGCTGACTGGTACGCTCAAGAAGATCAAAGACACCGGCACCATCACGCTGGGCGTGCGCGATTCGTCGATTCCGTTCA GCTACAACGTCGGCGGTGTCCGCACGATCGGCTATTCGTACGACGTCGCCACCAAGATTGCCGAGGACGTGAAGAAGCAG CTCGGCCTGAAGGACCTGAAGGTCAACGAGATCCCGGTCACTTCGCAGAACCGCATCACGCTGCTGCAGAACGGCACCAT CGATCTGGAGTGCGGTTCGACCACGAACAACCTCGAGCGTCAGAAGCAGGCATCGTTCACGAACACCATCTTCATCATCG GCACGCGCATCATGGTGAAGAAGGATTCGGGCGTCAAAGATTGGGCAGACCTGAAGGGCAAGAACGTCGTGACCACCGCC GGTACGACTTCGGAACGCCTGCTGCGCAAGATGAACGATGAGAAGCAGATGGGCATGAACATCATCAGCACGAAGGACCA CGGCCAGTCGTTCCTGACGCTGGAATCGGGCCGCGCTGTTGCGTTCATGATGGACGACGCCCTGCTGTACGGCGAGCGCG CCAAGGCCAAGAACCCGGCTGAGTGGGTGGTCGTGGCCAAGCCGCAATCGCGCGAAGCCTACGGCTGTATGGTTCGCAAG GACGACAAGCCGTTCAAGGCCCTGGCCGACAAGACGATCGCCGGCATGATGAAGGACGGCACGATCAACGCCGAATACAA GAAGTGGTTCGAGCAGCCGGTTCCGCCCAAGGGCGTGAATATGGAGTTCCCGCTGTCGGACGACATGAAGGCGCTGATCA AGAACCCGAACGACAAGGCTCTTGACTGA
Upstream 100 bases:
>100_bases CTCCGTTGGATTCAACGATTTAGTGGCAACACCAATACTGTCGCCAAACGTTTTTTGGTACAGTCCCGTCTTTCTCTTTC ATGGTCAAAAGGAGACTTTC
Downstream 100 bases:
>100_bases TCGGCTCCCTCAACGGGCCTGATACAAGCGTCACCGAAACGGAAGGCAAAGGCCGGTTAACAGGTCTTCTCCCTTCCGTT TCTTTTTGAGGGAACCATCA
Product: family 3 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MNLAKLATVVAAVGVAVGAFGSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIAEDVKKQ LGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQASFTNTIFIIGTRIMVKKDSGVKDWADLKGKNVVTTA GTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPAEWVVVAKPQSREAYGCMVRK DDKPFKALADKTIAGMMKDGTINAEYKKWFEQPVPPKGVNMEFPLSDDMKALIKNPNDKALD
Sequences:
>Translated_302_residues MNLAKLATVVAAVGVAVGAFGSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIAEDVKKQ LGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQASFTNTIFIIGTRIMVKKDSGVKDWADLKGKNVVTTA GTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPAEWVVVAKPQSREAYGCMVRK DDKPFKALADKTIAGMMKDGTINAEYKKWFEQPVPPKGVNMEFPLSDDMKALIKNPNDKALD >Mature_302_residues MNLAKLATVVAAVGVAVGAFGSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGVRTIGYSYDVATKIAEDVKKQ LGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLERQKQASFTNTIFIIGTRIMVKKDSGVKDWADLKGKNVVTTA GTTSERLLRKMNDEKQMGMNIISTKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPAEWVVVAKPQSREAYGCMVRK DDKPFKALADKTIAGMMKDGTINAEYKKWFEQPVPPKGVNMEFPLSDDMKALIKNPNDKALD
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=271, Percent_Identity=61.9926199261993, Blast_Score=349, Evalue=1e-97, Organism=Escherichia coli, GI1788228, Length=275, Percent_Identity=28, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32957; Mature: 32957
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLAKLATVVAAVGVAVGAFGSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGV CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCE RTIGYSYDVATKIAEDVKKQLGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLER EEECCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEECCEEEEEECCCCCHHHH QKQASFTNTIFIIGTRIMVKKDSGVKDWADLKGKNVVTTAGTTSERLLRKMNDEKQMGMN HHHHHHCCEEEEEEEEEEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHCCE IISTKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPAEWVVVAKPQSREAYGCMVRK EEEECCCCCEEEEEECCCEEEEEECCHHEECCCCCCCCCCCEEEEECCCCCCCEEEEEEC DDKPFKALADKTIAGMMKDGTINAEYKKWFEQPVPPKGVNMEFPLSDDMKALIKNPNDKA CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHCCCCCCC LD CC >Mature Secondary Structure MNLAKLATVVAAVGVAVGAFGSAAHAEELTGTLKKIKDTGTITLGVRDSSIPFSYNVGGV CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCE RTIGYSYDVATKIAEDVKKQLGLKDLKVNEIPVTSQNRITLLQNGTIDLECGSTTNNLER EEECCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEECCEEEEEECCCCCHHHH QKQASFTNTIFIIGTRIMVKKDSGVKDWADLKGKNVVTTAGTTSERLLRKMNDEKQMGMN HHHHHHCCEEEEEEEEEEEECCCCCCHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHCCE IISTKDHGQSFLTLESGRAVAFMMDDALLYGERAKAKNPAEWVVVAKPQSREAYGCMVRK EEEECCCCCEEEEEECCCEEEEEECCHHEECCCCCCCCCCCEEEEECCCCCCCEEEEEEC DDKPFKALADKTIAGMMKDGTINAEYKKWFEQPVPPKGVNMEFPLSDDMKALIKNPNDKA CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHCCCCCCC LD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]