Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927411
Identifier: 187927411
GI number: 187927411
Start: 324754
End: 325716
Strand: Reverse
Name: 187927411
Synonym: Rpic_0307
Alternate gene names: NA
Gene position: 325716-324754 (Counterclockwise)
Preceding gene: 187927412
Following gene: 187927410
Centisome position: 8.26
GC content: 67.29
Gene sequence:
>963_bases ATGAAGCGCTCCGACTGGGCCGAGCGTCCGGAGCGCAGCAACCTCGCGCTGCTGCGCCTGATGACGTGGCTCTCGCTGCG GCTCGGGCGGCCGTTCGGCCGGGTCCTGCTGCGGCTGATTGCGTTGTATTTCGTGGCGGCCTCGCCAGCGGCGCGGGGCG CTTCACGTGACTATCTGCGCCGCGCGCTCGGCCGCACTGCAACGCTGTGCGACGTGTTCCGCCACATGCTCACGTTCGCC ACGACCATTCATGACCGCATCTACCTGATCAGCGGGCGCTTCGGTCTGTTCGACATCCAGTTGCAGGGCCAACAGCACGT GCACAACGTGCTGGCGCAGGGGCGCGGCGCGTTCCTGCTGGGCGCGCACCTGGGCAGTTTCGAGGTGGTACGCGCGCTCG GCCGGACGGTGCCGGATCTACGCGTGGCTGTCGCCATGTACGAAGAGAATGCACGCAACATCAACGCCGCGGTGGCCGCC ATCAACCCGGCGGCGGCGCCGGAGGTCATTCCGCTCGGCCGCGTGGACGCCATGCTGCAAGTGCGCGAAGCGCTGGATGA CAACCGGCTCGTCGGCATGCTGGCCGATCGCACGCTGTTGCGCGACGCGGGGCCGTCAGTCCGGCACATGGATTTTCTCG GCAGCCCGGCGGCGTTTCCGTTGGGGCCGCTGCACATGGCGGCCATGCTCAAACGCCCCGTACTGTTCATGACGGGGCTG CACCTGGGCGGCAATCGCTACGCTGTGCATTTCGATCTGTTGGCGGACTTCACCGATGTGCGCCGCGAAGATCGCGCCGC CGCCGTGCAAGCCGCGCTCGGCCGCTATGTGGAACGCGTTGAACATTACTGCCGCACCGCACCGTACAACTGGTTCAATT ACTTCGACTTCTGGCAGGATGCCGACGCGGCCGGAGCGCCGGATCACGCCCCCGCCGACCACCAGACCACGCAAACGCCA TGA
Upstream 100 bases:
>100_bases AGACGACGCCAAGCAACGCCGTGCGCTTCACAATCCGCGCGGGCGAACGTGAAGTGGCCAGCGGCGTCCTGTCTGCCCCG GCACCGGAGGGCGTTGCCGC
Downstream 100 bases:
>100_bases CTGCAACGCGCCCATTCTTCCGCGCCTTCCTGGCCTTGCTCGCGGCCAGCATGTTGGCCGCGACCGCTCACGCTGCGGAT TCCGCCTGGACGCTCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Lipid A Biosynthesis Acyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Acetyltransferase; Glycosyl Transferase Family 2 And Acyltransferase Domains; Acyltransferase-Like Protein; Lipid A Biosynthesis Acyltransferase Family; Bacterial Lipid A Biosynthesis Acyltransferase Family; Oligosaccharide Acyltransferase Family Protein; Bifunctional Glycosyl Transferase/Acyl Transferase; Family 2 Glycosyl Transferase; XanthomoNADin Biosynthesis Acyltransferase Protein
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKRSDWAERPERSNLALLRLMTWLSLRLGRPFGRVLLRLIALYFVAASPAARGASRDYLRRALGRTATLCDVFRHMLTFA TTIHDRIYLISGRFGLFDIQLQGQQHVHNVLAQGRGAFLLGAHLGSFEVVRALGRTVPDLRVAVAMYEENARNINAAVAA INPAAAPEVIPLGRVDAMLQVREALDDNRLVGMLADRTLLRDAGPSVRHMDFLGSPAAFPLGPLHMAAMLKRPVLFMTGL HLGGNRYAVHFDLLADFTDVRREDRAAAVQAALGRYVERVEHYCRTAPYNWFNYFDFWQDADAAGAPDHAPADHQTTQTP
Sequences:
>Translated_320_residues MKRSDWAERPERSNLALLRLMTWLSLRLGRPFGRVLLRLIALYFVAASPAARGASRDYLRRALGRTATLCDVFRHMLTFA TTIHDRIYLISGRFGLFDIQLQGQQHVHNVLAQGRGAFLLGAHLGSFEVVRALGRTVPDLRVAVAMYEENARNINAAVAA INPAAAPEVIPLGRVDAMLQVREALDDNRLVGMLADRTLLRDAGPSVRHMDFLGSPAAFPLGPLHMAAMLKRPVLFMTGL HLGGNRYAVHFDLLADFTDVRREDRAAAVQAALGRYVERVEHYCRTAPYNWFNYFDFWQDADAAGAPDHAPADHQTTQTP >Mature_320_residues MKRSDWAERPERSNLALLRLMTWLSLRLGRPFGRVLLRLIALYFVAASPAARGASRDYLRRALGRTATLCDVFRHMLTFA TTIHDRIYLISGRFGLFDIQLQGQQHVHNVLAQGRGAFLLGAHLGSFEVVRALGRTVPDLRVAVAMYEENARNINAAVAA INPAAAPEVIPLGRVDAMLQVREALDDNRLVGMLADRTLLRDAGPSVRHMDFLGSPAAFPLGPLHMAAMLKRPVLFMTGL HLGGNRYAVHFDLLADFTDVRREDRAAAVQAALGRYVERVEHYCRTAPYNWFNYFDFWQDADAAGAPDHAPADHQTTQTP
Specific function: Unknown
COG id: COG4261
COG function: function code R; Predicted acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35679; Mature: 35679
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSDWAERPERSNLALLRLMTWLSLRLGRPFGRVLLRLIALYFVAASPAARGASRDYLR CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHH RALGRTATLCDVFRHMLTFATTIHDRIYLISGRFGLFDIQLQGQQHVHNVLAQGRGAFLL HHHCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEECCHHHHHHHHHCCCCCEEE GAHLGSFEVVRALGRTVPDLRVAVAMYEENARNINAAVAAINPAAAPEVIPLGRVDAMLQ ECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCHHHHHHH VREALDDNRLVGMLADRTLLRDAGPSVRHMDFLGSPAAFPLGPLHMAAMLKRPVLFMTGL HHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHCE HLGGNRYAVHFDLLADFTDVRREDRAAAVQAALGRYVERVEHYCRTAPYNWFNYFDFWQD EECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC ADAAGAPDHAPADHQTTQTP CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRSDWAERPERSNLALLRLMTWLSLRLGRPFGRVLLRLIALYFVAASPAARGASRDYLR CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHH RALGRTATLCDVFRHMLTFATTIHDRIYLISGRFGLFDIQLQGQQHVHNVLAQGRGAFLL HHHCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEECCHHHHHHHHHCCCCCEEE GAHLGSFEVVRALGRTVPDLRVAVAMYEENARNINAAVAAINPAAAPEVIPLGRVDAMLQ ECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCHHHHHHH VREALDDNRLVGMLADRTLLRDAGPSVRHMDFLGSPAAFPLGPLHMAAMLKRPVLFMTGL HHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHCE HLGGNRYAVHFDLLADFTDVRREDRAAAVQAALGRYVERVEHYCRTAPYNWFNYFDFWQD EECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC ADAAGAPDHAPADHQTTQTP CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA