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The map label for this gene is 187927386

Identifier: 187927386

GI number: 187927386

Start: 295113

End: 295919

Strand: Direct

Name: 187927386

Synonym: Rpic_0280

Alternate gene names: NA

Gene position: 295113-295919 (Clockwise)

Preceding gene: 187927385

Following gene: 187927388

Centisome position: 7.49

GC content: 59.98

Gene sequence:

>807_bases
ATGGAGAAACGCAGACCGTATCCGAGCGACGTGAGTGACGAAGAATGGAGCTTCGCGGCGCCGTATTTGACGTTGATGAA
CCAAGACGCGCCGCAGAGGCGATATGAATTGCGAGAGCTGTTCAACGCGCTGCGTTGGCTGGCACGCGCGGGGGCCGCAT
GGCGCATGCTGCCGACGAACTTTCCGCCCTGGGAGGCTGTGTACCAGCAGACGCAACGCTGGCTGCGAGGGGGCTGTTTT
GAGGCCATGGTTCAGGATTTGCGTTCGGTGCTGCGCGTGGCGCAAGGGCGGCAAGGTCAGCCGAGTGCAGTCATTCTCGA
CGGGCGTACGCTGCAATCGACGTGCGAGAGCGGTCCGCGCGCGGGTTACGACGGCTACAAGCGCAAACGGGGAAGCAAGG
TGCATATGGCCGTCGATACACTCGGGCATTTGCTGGCAGTTCATATCACGCCGGCCAATGAACAAGAGCGCGCGCAAGTT
CAGGTGTTGGCACGAGAGGTTCAGCTTGTGACCGGGCAGACTGTAAAGCTTGCTTTTGCCGACCAGGGTTATACGGGCGA
AGAACCAGCGCAAGCCGCGCGGGACGAAGGCATCGAATTGCAGGTCATCAAACTGCCAGAGGCGAAGAAAGGCTTTGTCC
TGCTGCCACGCCGATGGGTCGTCGAGCGCAGTTTCGGATGGCTCAATCGGTTTCGAAGACTCGCACGCGACTACGAGCGC
TTGCCTGAAACACTCGCCGGCTTGCATTTCGTCGTCTTTGCCATGCTCATGCTCGTTCACGCCGCACCTGTCGTCCAAAG
TGCATAA

Upstream 100 bases:

>100_bases
TACGGAATGCATCCTGAACCGGCCAAGTCAACTCCGGCATCTCGCTCGGCTTTCCTAGAGCGTGTTATGCACTTTCCGTC
GGTGCTGCAGTCGAAGCGTG

Downstream 100 bases:

>100_bases
CACGCTCTAGAAGGAAGCCTTGTACATGGTTGATGCCCAGATTGCGGCAAACCGCCAGGTCTTCGCGATTTTCAAGCCCC
TCCGCAATCAACTGCGCTTG

Product: transposase IS4 family protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; Transposase-Like Protein; Transposase Of; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase Protein; ISXo3 Transposase ORF B; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Is4 Transposase Protein; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Transposase Fragment

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MEKRRPYPSDVSDEEWSFAAPYLTLMNQDAPQRRYELRELFNALRWLARAGAAWRMLPTNFPPWEAVYQQTQRWLRGGCF
EAMVQDLRSVLRVAQGRQGQPSAVILDGRTLQSTCESGPRAGYDGYKRKRGSKVHMAVDTLGHLLAVHITPANEQERAQV
QVLAREVQLVTGQTVKLAFADQGYTGEEPAQAARDEGIELQVIKLPEAKKGFVLLPRRWVVERSFGWLNRFRRLARDYER
LPETLAGLHFVVFAMLMLVHAAPVVQSA

Sequences:

>Translated_268_residues
MEKRRPYPSDVSDEEWSFAAPYLTLMNQDAPQRRYELRELFNALRWLARAGAAWRMLPTNFPPWEAVYQQTQRWLRGGCF
EAMVQDLRSVLRVAQGRQGQPSAVILDGRTLQSTCESGPRAGYDGYKRKRGSKVHMAVDTLGHLLAVHITPANEQERAQV
QVLAREVQLVTGQTVKLAFADQGYTGEEPAQAARDEGIELQVIKLPEAKKGFVLLPRRWVVERSFGWLNRFRRLARDYER
LPETLAGLHFVVFAMLMLVHAAPVVQSA
>Mature_268_residues
MEKRRPYPSDVSDEEWSFAAPYLTLMNQDAPQRRYELRELFNALRWLARAGAAWRMLPTNFPPWEAVYQQTQRWLRGGCF
EAMVQDLRSVLRVAQGRQGQPSAVILDGRTLQSTCESGPRAGYDGYKRKRGSKVHMAVDTLGHLLAVHITPANEQERAQV
QVLAREVQLVTGQTVKLAFADQGYTGEEPAQAARDEGIELQVIKLPEAKKGFVLLPRRWVVERSFGWLNRFRRLARDYER
LPETLAGLHFVVFAMLMLVHAAPVVQSA

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30530; Mature: 30530

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRRPYPSDVSDEEWSFAAPYLTLMNQDAPQRRYELRELFNALRWLARAGAAWRMLPTN
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
FPPWEAVYQQTQRWLRGGCFEAMVQDLRSVLRVAQGRQGQPSAVILDGRTLQSTCESGPR
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHCCCCC
AGYDGYKRKRGSKVHMAVDTLGHLLAVHITPANEQERAQVQVLAREVQLVTGQTVKLAFA
CCCCHHHHHCCCEEEHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
DQGYTGEEPAQAARDEGIELQVIKLPEAKKGFVLLPRRWVVERSFGWLNRFRRLARDYER
CCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LPETLAGLHFVVFAMLMLVHAAPVVQSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKRRPYPSDVSDEEWSFAAPYLTLMNQDAPQRRYELRELFNALRWLARAGAAWRMLPTN
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
FPPWEAVYQQTQRWLRGGCFEAMVQDLRSVLRVAQGRQGQPSAVILDGRTLQSTCESGPR
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHCCCCC
AGYDGYKRKRGSKVHMAVDTLGHLLAVHITPANEQERAQVQVLAREVQLVTGQTVKLAFA
CCCCHHHHHCCCEEEHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
DQGYTGEEPAQAARDEGIELQVIKLPEAKKGFVLLPRRWVVERSFGWLNRFRRLARDYER
CCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
LPETLAGLHFVVFAMLMLVHAAPVVQSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA