Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 187927340

GI number: 187927340

Start: 248072

End: 248941

Strand: Direct

Name: yhhW [C]

Synonym: Rpic_0233

Alternate gene names: 187927340

Gene position: 248072-248941 (Clockwise)

Preceding gene: 187927339

Following gene: 187927346

Centisome position: 6.29

GC content: 67.24

Gene sequence:

>870_bases
ATGACTTCCATCCAGCACATCATTGGCCCGCACGTGCGGGACCTCGGCGGTTTCTCGGTCAAGCGCGTGCTGCCCTCGGC
AGCGCGTCAGACGGTGGGGCCGTTCATCTTCTTCGATCACATGGGCCCGGTGAATTTCGCCCCCGGCGAGGGCATCGACG
TGCGCCCGCACCCGCACATCGGGCTGGCCACCGTCACGTACCTGTTTGACGGCAGCATGGTCCACCGAGACAGCCTCGGC
AGCGTGCAGACCATCACCCCCGGCGACGTGAACTGGATGACGGCCGGCAACGGCATCGTCCACTCCGAGCGTTCCTCGCC
GGAAGGGCGCGAAAAGGGCGCGCGCATGCACGGCATCCAGACCTGGGTAGCGCTGCCGAAGGACCAGGAAAAGGTCAACG
CCAGCTTCGCGCACCATGCGGCCGAGACGCTGCCCAAGCTGGAGTGCCCAGGCGTGCAGGGCGTGGTCATCGCGGGAGAT
GCGTTCGGGCTGACGTCGCCGGTGAAGGTGAGTTCGCGCACGCTGTATGTGGCGCTGGAACTCGCGGCCGGCGCATCGCT
GGTGATTCCGCCTGAGCATGCAGACCGTGGCCTGTATCTGGTCGACGGCGCCGTCACCATCGACGGCGAGGCGCTCGACC
CGCAGCACCTGGCCGTGCTGGAGCCCGGCGGCGACGTGACGCTCACCGCGCAGGCATCGTCACGCGTGATGCTGCTGGGC
GGTGCCCCGACCGATGGCCACCGTCACATCTACTGGAACTTCGTCGCCAGCGACAAGGCCGACATTGAAGACGCCAAGCA
GCGCTGGGAGAGCGACGCCTTCGCTCACGTGCCCGGCGAAACGGAGCGCATTCCGCTGCCGTCCAAGTAA

Upstream 100 bases:

>100_bases
CTGCGCGTGGCCGGCAAATGCCCCGTTCACAAGCTGATGACCGAGGTCGAGATCAGCGTCGACACCGAACTCGCCGAGCA
CGCCTGAGGAGGCTTCCGTC

Downstream 100 bases:

>100_bases
GACCGGGCGATCGATCAGGCAGCCTGCGCCGGTCGTGCACAGCGCACGATCGCGCGGACCTGCTTGGCGATCGGCTCCGG
CACCGGCTGCTTGCCGTCGA

Product: Pirin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTSIQHIIGPHVRDLGGFSVKRVLPSAARQTVGPFIFFDHMGPVNFAPGEGIDVRPHPHIGLATVTYLFDGSMVHRDSLG
SVQTITPGDVNWMTAGNGIVHSERSSPEGREKGARMHGIQTWVALPKDQEKVNASFAHHAAETLPKLECPGVQGVVIAGD
AFGLTSPVKVSSRTLYVALELAAGASLVIPPEHADRGLYLVDGAVTIDGEALDPQHLAVLEPGGDVTLTAQASSRVMLLG
GAPTDGHRHIYWNFVASDKADIEDAKQRWESDAFAHVPGETERIPLPSK

Sequences:

>Translated_289_residues
MTSIQHIIGPHVRDLGGFSVKRVLPSAARQTVGPFIFFDHMGPVNFAPGEGIDVRPHPHIGLATVTYLFDGSMVHRDSLG
SVQTITPGDVNWMTAGNGIVHSERSSPEGREKGARMHGIQTWVALPKDQEKVNASFAHHAAETLPKLECPGVQGVVIAGD
AFGLTSPVKVSSRTLYVALELAAGASLVIPPEHADRGLYLVDGAVTIDGEALDPQHLAVLEPGGDVTLTAQASSRVMLLG
GAPTDGHRHIYWNFVASDKADIEDAKQRWESDAFAHVPGETERIPLPSK
>Mature_288_residues
TSIQHIIGPHVRDLGGFSVKRVLPSAARQTVGPFIFFDHMGPVNFAPGEGIDVRPHPHIGLATVTYLFDGSMVHRDSLGS
VQTITPGDVNWMTAGNGIVHSERSSPEGREKGARMHGIQTWVALPKDQEKVNASFAHHAAETLPKLECPGVQGVVIAGDA
FGLTSPVKVSSRTLYVALELAAGASLVIPPEHADRGLYLVDGAVTIDGEALDPQHLAVLEPGGDVTLTAQASSRVMLLGG
APTDGHRHIYWNFVASDKADIEDAKQRWESDAFAHVPGETERIPLPSK

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=235, Percent_Identity=33.1914893617021, Blast_Score=114, Evalue=8e-26,
Organism=Homo sapiens, GI4505823, Length=235, Percent_Identity=33.1914893617021, Blast_Score=114, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 30855; Mature: 30724

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIQHIIGPHVRDLGGFSVKRVLPSAARQTVGPFIFFDHMGPVNFAPGEGIDVRPHPHI
CCCCCHHHCCCHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
GLATVTYLFDGSMVHRDSLGSVQTITPGDVNWMTAGNGIVHSERSSPEGREKGARMHGIQ
CCEEEEEEECCCEEECCCCCCEEEECCCCCEEEECCCCEEECCCCCCCHHHHCCHHCCEE
TWVALPKDQEKVNASFAHHAAETLPKLECPGVQGVVIAGDAFGLTSPVKVSSRTLYVALE
EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEECCEEEEEEEE
LAAGASLVIPPEHADRGLYLVDGAVTIDGEALDPQHLAVLEPGGDVTLTAQASSRVMLLG
ECCCCEEEECCCCCCCCEEEEECEEEECCCCCCCCEEEEECCCCCEEEEEECCCEEEEEE
GAPTDGHRHIYWNFVASDKADIEDAKQRWESDAFAHVPGETERIPLPSK
CCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TSIQHIIGPHVRDLGGFSVKRVLPSAARQTVGPFIFFDHMGPVNFAPGEGIDVRPHPHI
CCCCHHHCCCHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
GLATVTYLFDGSMVHRDSLGSVQTITPGDVNWMTAGNGIVHSERSSPEGREKGARMHGIQ
CCEEEEEEECCCEEECCCCCCEEEECCCCCEEEECCCCEEECCCCCCCHHHHCCHHCCEE
TWVALPKDQEKVNASFAHHAAETLPKLECPGVQGVVIAGDAFGLTSPVKVSSRTLYVALE
EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEECCEEEEEEEE
LAAGASLVIPPEHADRGLYLVDGAVTIDGEALDPQHLAVLEPGGDVTLTAQASSRVMLLG
ECCCCEEEECCCCCCCCEEEEECEEEECCCCCCCCEEEEECCCCCEEEEEECCCEEEEEE
GAPTDGHRHIYWNFVASDKADIEDAKQRWESDAFAHVPGETERIPLPSK
CCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]