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The map label for this gene is ctaG [H]

Identifier: 187927328

GI number: 187927328

Start: 236909

End: 237517

Strand: Direct

Name: ctaG [H]

Synonym: Rpic_0221

Alternate gene names: 187927328

Gene position: 236909-237517 (Clockwise)

Preceding gene: 187927327

Following gene: 187927329

Centisome position: 6.01

GC content: 59.28

Gene sequence:

>609_bases
ATGAGCCAGACACCGGCGCAGCCGGACCCGACCCAAAACGACAAAGCTCTCGAGCGCGGCCTGAACCGTTCCATGCTCGG
CAAGCTGGCCGTCGTGGTCGCGATCATGTTCGGCTTCGGCTACGCGATGGTGCCGTTGTACAAGAAGATCTGCGAGATCA
CGAACATCAACGTGCTGAACACGCGTGATGAGGATGGCGGCGCGCTGCGCAACTCCCAGGTCGACAAGACGCGCACGATC
ACGGTGGAATTCGATTCGAACAGCCAGGGGCCGTTCCGCTTCCGCCCGGTCAAGAACAGCATGGATGTGCACCCCGGCGA
GATCAGCCAGATCGTCTACGAGGTGGTGAACAAGGAGGGGCGTACGGTGGAGGCGCAGGCCATCCCGAGTTACGCGCCCA
AGCAGGCAACCGAGTTCTTCAAGAAGATCGAGTGTTTCTGTTTCAAGCAGCAGACGCTGACGGCCAACGAATCACGCGAG
ATGCCGGTGGTGTTTGTGATTGATCCGGATCTTCCCAAGGACGTGAAGACGATCACTCTGTCCTACACTTTCTTTGAAAT
CCACGCGCCGTCGGTCATTGCGCCGGCGATGCCGAACAAGGGAACGTGA

Upstream 100 bases:

>100_bases
CTGGTTTTCTTTCTGGGTGTGATTTTCAAGCGCGTGGTGTTCGGCGGCTAGCCGGGCAAGCGACGCGCTGGTCGCTGAAC
CGAGATTTCGCGAGACCCCT

Downstream 100 bases:

>100_bases
GGACATGGACGACCTGAAGGAAGCGACCAAGCGGCGCGCATCATTCGCACAGACGATGAAGGCGGTGTTCTGGTCCTTCT
TCGGGGTGCGCAAAGGCCGC

Product: cytochrome C oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSQTPAQPDPTQNDKALERGLNRSMLGKLAVVVAIMFGFGYAMVPLYKKICEITNINVLNTRDEDGGALRNSQVDKTRTI
TVEFDSNSQGPFRFRPVKNSMDVHPGEISQIVYEVVNKEGRTVEAQAIPSYAPKQATEFFKKIECFCFKQQTLTANESRE
MPVVFVIDPDLPKDVKTITLSYTFFEIHAPSVIAPAMPNKGT

Sequences:

>Translated_202_residues
MSQTPAQPDPTQNDKALERGLNRSMLGKLAVVVAIMFGFGYAMVPLYKKICEITNINVLNTRDEDGGALRNSQVDKTRTI
TVEFDSNSQGPFRFRPVKNSMDVHPGEISQIVYEVVNKEGRTVEAQAIPSYAPKQATEFFKKIECFCFKQQTLTANESRE
MPVVFVIDPDLPKDVKTITLSYTFFEIHAPSVIAPAMPNKGT
>Mature_201_residues
SQTPAQPDPTQNDKALERGLNRSMLGKLAVVVAIMFGFGYAMVPLYKKICEITNINVLNTRDEDGGALRNSQVDKTRTIT
VEFDSNSQGPFRFRPVKNSMDVHPGEISQIVYEVVNKEGRTVEAQAIPSYAPKQATEFFKKIECFCFKQQTLTANESREM
PVVFVIDPDLPKDVKTITLSYTFFEIHAPSVIAPAMPNKGT

Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]

COG id: COG3175

COG function: function code O; Cytochrome oxidase assembly factor

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX11/CtaG family [H]

Homologues:

Organism=Homo sapiens, GI4758034, Length=183, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI71990692, Length=163, Percent_Identity=35.5828220858896, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6325125, Length=185, Percent_Identity=34.5945945945946, Blast_Score=103, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24581944, Length=171, Percent_Identity=31.5789473684211, Blast_Score=96, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007533 [H]

Pfam domain/function: PF04442 CtaG_Cox11 [H]

EC number: NA

Molecular weight: Translated: 22552; Mature: 22421

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTPAQPDPTQNDKALERGLNRSMLGKLAVVVAIMFGFGYAMVPLYKKICEITNINVLN
CCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TRDEDGGALRNSQVDKTRTITVEFDSNSQGPFRFRPVKNSMDVHPGEISQIVYEVVNKEG
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCC
RTVEAQAIPSYAPKQATEFFKKIECFCFKQQTLTANESREMPVVFVIDPDLPKDVKTITL
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEECCCCCCCCEEEEE
SYTFFEIHAPSVIAPAMPNKGT
EEEEEEEECCCEECCCCCCCCC
>Mature Secondary Structure 
SQTPAQPDPTQNDKALERGLNRSMLGKLAVVVAIMFGFGYAMVPLYKKICEITNINVLN
CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TRDEDGGALRNSQVDKTRTITVEFDSNSQGPFRFRPVKNSMDVHPGEISQIVYEVVNKEG
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCC
RTVEAQAIPSYAPKQATEFFKKIECFCFKQQTLTANESREMPVVFVIDPDLPKDVKTITL
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEEECCCCCCCCEEEEE
SYTFFEIHAPSVIAPAMPNKGT
EEEEEEEECCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA