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The map label for this gene is fdx4 [H]

Identifier: 187927293

GI number: 187927293

Start: 203216

End: 203545

Strand: Reverse

Name: fdx4 [H]

Synonym: Rpic_0185

Alternate gene names: 187927293

Gene position: 203545-203216 (Counterclockwise)

Preceding gene: 187927297

Following gene: 187927292

Centisome position: 5.16

GC content: 61.21

Gene sequence:

>330_bases
ATGAGCAGCCACTATCAGCACCACGTTTTCTTCTGCCTGAACGAACGCGAGGACGGCTCGCGCTGCTGCGCCGACTTTGG
CGCCAAGGCCATGCAGGAATACGCCAAGAAGCGCTGCAAGGAACTCGGCATCAACGGTGAAGGCCGCGTGCGCATCAACA
AGGCCGGCTGCCTGGACCGCTGCGAACTCGGTCCGGTCATGGTGGTCTACCCCGAGGCCGTCTGGTACACCTTTGTCGAC
AAGGAAGACATCGACGAGATCATCCAGAGCCATCTGATCGAAGGCAAACCGGTCGAACGGCTGATGGTCGACCGCCCTGC
CAGCGCGTGA

Upstream 100 bases:

>100_bases
GCTCGTTACGCAAATCCACATGTGTGCGCGACGCCAGGAAGCTATTCGCGTCCTGCCGTGCGCGCTGTCACGCAGCCCTC
CCAGCCTTCTCGGTCCGCCC

Downstream 100 bases:

>100_bases
GCCCGCGCTTTACTGCATCTGCTTTCCCCTTCTCCATGAACGTTCATACCGAAGAACGCCTAATTCCCGGCCCGGTCGGA
CAGATCGACCTGTCGATCGA

Product: putative ferredoxin 2Fe-2S protein

Products: NA

Alternate protein names: AaFd4 [H]

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSSHYQHHVFFCLNEREDGSRCCADFGAKAMQEYAKKRCKELGINGEGRVRINKAGCLDRCELGPVMVVYPEAVWYTFVD
KEDIDEIIQSHLIEGKPVERLMVDRPASA

Sequences:

>Translated_109_residues
MSSHYQHHVFFCLNEREDGSRCCADFGAKAMQEYAKKRCKELGINGEGRVRINKAGCLDRCELGPVMVVYPEAVWYTFVD
KEDIDEIIQSHLIEGKPVERLMVDRPASA
>Mature_108_residues
SSHYQHHVFFCLNEREDGSRCCADFGAKAMQEYAKKRCKELGINGEGRVRINKAGCLDRCELGPVMVVYPEAVWYTFVDK
EDIDEIIQSHLIEGKPVERLMVDRPASA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 12437; Mature: 12306

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHYQHHVFFCLNEREDGSRCCADFGAKAMQEYAKKRCKELGINGEGRVRINKAGCLDR
CCCCCCEEEEEEECCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
CELGPVMVVYPEAVWYTFVDKEDIDEIIQSHLIEGKPVERLMVDRPASA
CCCCCEEEEECCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
SSHYQHHVFFCLNEREDGSRCCADFGAKAMQEYAKKRCKELGINGEGRVRINKAGCLDR
CCCCCEEEEEEECCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
CELGPVMVVYPEAVWYTFVDKEDIDEIIQSHLIEGKPVERLMVDRPASA
CCCCCEEEEECCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320; 10441520; 10884354; 12089152 [H]