Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927282
Identifier: 187927282
GI number: 187927282
Start: 191749
End: 193716
Strand: Reverse
Name: 187927282
Synonym: Rpic_0174
Alternate gene names: NA
Gene position: 193716-191749 (Counterclockwise)
Preceding gene: 187927284
Following gene: 187927281
Centisome position: 4.91
GC content: 67.58
Gene sequence:
>1968_bases GTGCAACGTCGATCTGATACCGCCGCCCACACCGAAACCGCATCCGCTGCCGCTGCAGCCGGCAACCTCCGTCTTGAATC CATTCCCGCGCTGCGCGATGCCGGCGTGCAGACCGAACATTGGTCGGCGGCGCAGCAGTTGGCACGCTGCCGGGTGCTGT CGCGCCTGCTGCAGGCGCTGTTTCGTGAAGCGCTGCTCAGCGCAGATCGACTCATCGCCGATACGCGCGCCGATGTGACG TTGCTGCCGATCTGGCAGCAGCGCGTGCTGTTACGCTTCACTGGCTTGCGGCCGGGCGCACTCGGCAGCTGGACATTGAC GGGCGACGTCGCTGTGCTGGCGCACGATCGCCCGCCGACGCCGATTGAACGTCCATCAGCCCTGCTCCACTGGCTCGCGC CCATGCTGGACATGGGCGATGCCGCCGAGGCCCATCGCCTCGCCGCCATCGACCGGCTCGCGGCAGAACTCGACAACAGC CAGGACAACGACACGCTGTGCCAGGCCTATCGACTCGCCTGGGGCGCACGTCTCGCTGCCGAGCACCGCACCGCCGCGTG GCAAGACGCGCTGGCCCTGCTCTGCGGCGACGGCACGCCCCACGCCTTGGCGCGCACCGAGCAATGGGGCACCGGCGGCC ACCCGTGGCATCCGGCCTACAAGACACGGCTGGGACTGGCTCCCGACCAGGTGATTGCGCTGTCGCCAGAGTTCGAGGCA CAGGTGCCCCTCGGCGTGGTGGCGGTGGCGGCGCATCGACTGCAGGTCACGACGATGGACGGTGTGCAGCCGTACGCCAA TTGGTTCGCGGCGGCGTTCCCGCAAACCATGGCGGCGTTTCGCAAAGCCCTGTTGGCACGCCAGCTCGCGCCCGAAGCGT GGCTGCCGCTGCCCGTTCACCCGTGGCAGCGCGACACGACACTCGGTGAGACCTTCGCCGCAGAATTTGCCGCAGGCGAA TTGATCCGTTTGCCGGACATCAACATTGCCGCCCGGCCAACGATGTCATTCCGCACCGTGGCCGCGACCGACGCGCCGGG CGGCGCGATGCTCAAGCTGCCGGTCAGCATGCGGCTGACCAGCGTTGAGCGCACCGTATCGCCCAAATCGGCCGTGATGG GCCCGCGCGTGAGTGCGCTGCTGGAACGCATCCTCGCGAACGACGCAGCATTGGCGAGCGTCTTGTCGATCGTGCCGGAA CGCCATGGCATCCACTTGGCCGGCACCGACGACGAGCGCGCCCGGCATCTGTCGATGATCGTGCGCGACAACCCCACCAC GCGCATCGCCGGCAACGCGCGGCTGCTGCCGGTCGGTGCCCTCTTCACACCGGATTTCACCGCCGACATGACGCACGCAG CAGCACCGCTGCTGCTCGACACCGTGCTGGCGCGCCAGGCCGACGGCACGCGCGCCGAGCGGGCTGCGCGCTTTTTCGAT GCGTACCTGCACGTAGCCATTCCGGCCATCGTCGGCCTCTATTTGCGTTACGGCATTGCGTTGGAGGCGCATCAGCAGAA CACCTTCGTCGTCATCGACGAGGCCGGTATGCCGGTGCGGCTGGTGGTGCGTGACTTTGGCGACGTGAAGATCGCCCTGC CGACGCTGCAGGCCCAAGGCTTCTCGATCGAGCCGTTCCGTGCAGGCCACACCACGTATCCCGATCGGGACATCCCGCGC AAGAAGCTGATCCACGCCTTCCTGCTGTGCCATATCGGTGAGCTGGCGCTGGCGCTGTTTCCCGAACACGGTAGCGCCGT CGGGCTACGCCAGTGGCATGACGCCATGCAGGCCGTGTTCGAGGCAAACCGCACGGCGCTGGATGCCGACACCTGGAAGC AGGAGCGTCACGCGCTGCTCGAAGCGCCATGGTCGTTCAAGACGTTCGTTCGCATGCGCCTGCGCGACCAGTCCGACGAC ATGCACGCCGCGCTGCCTAACCCGCTGGCCGACGCGGTTCGGACATGA
Upstream 100 bases:
>100_bases ATTCCCGCCTGTCTCTGAAGCGGCCCCTACATCTGGACCCCCTGTGCTGCAGGGTCGAGCCCCGCTCGCCTGCACACGCT CATGTCCCGTAGGAGCCCTC
Downstream 100 bases:
>100_bases GCCCCGCAACGCCCGTGGACGCGTGGCGCGAGGCCATTCGGTGGCTCCTCGTCATCCAGGCCCTTTCAATGGGCGCGATG GAAATGACAGGGCCGTTCTG
Product: IucA/IucC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MQRRSDTAAHTETASAAAAAGNLRLESIPALRDAGVQTEHWSAAQQLARCRVLSRLLQALFREALLSADRLIADTRADVT LLPIWQQRVLLRFTGLRPGALGSWTLTGDVAVLAHDRPPTPIERPSALLHWLAPMLDMGDAAEAHRLAAIDRLAAELDNS QDNDTLCQAYRLAWGARLAAEHRTAAWQDALALLCGDGTPHALARTEQWGTGGHPWHPAYKTRLGLAPDQVIALSPEFEA QVPLGVVAVAAHRLQVTTMDGVQPYANWFAAAFPQTMAAFRKALLARQLAPEAWLPLPVHPWQRDTTLGETFAAEFAAGE LIRLPDINIAARPTMSFRTVAATDAPGGAMLKLPVSMRLTSVERTVSPKSAVMGPRVSALLERILANDAALASVLSIVPE RHGIHLAGTDDERARHLSMIVRDNPTTRIAGNARLLPVGALFTPDFTADMTHAAAPLLLDTVLARQADGTRAERAARFFD AYLHVAIPAIVGLYLRYGIALEAHQQNTFVVIDEAGMPVRLVVRDFGDVKIALPTLQAQGFSIEPFRAGHTTYPDRDIPR KKLIHAFLLCHIGELALALFPEHGSAVGLRQWHDAMQAVFEANRTALDADTWKQERHALLEAPWSFKTFVRMRLRDQSDD MHAALPNPLADAVRT
Sequences:
>Translated_655_residues MQRRSDTAAHTETASAAAAAGNLRLESIPALRDAGVQTEHWSAAQQLARCRVLSRLLQALFREALLSADRLIADTRADVT LLPIWQQRVLLRFTGLRPGALGSWTLTGDVAVLAHDRPPTPIERPSALLHWLAPMLDMGDAAEAHRLAAIDRLAAELDNS QDNDTLCQAYRLAWGARLAAEHRTAAWQDALALLCGDGTPHALARTEQWGTGGHPWHPAYKTRLGLAPDQVIALSPEFEA QVPLGVVAVAAHRLQVTTMDGVQPYANWFAAAFPQTMAAFRKALLARQLAPEAWLPLPVHPWQRDTTLGETFAAEFAAGE LIRLPDINIAARPTMSFRTVAATDAPGGAMLKLPVSMRLTSVERTVSPKSAVMGPRVSALLERILANDAALASVLSIVPE RHGIHLAGTDDERARHLSMIVRDNPTTRIAGNARLLPVGALFTPDFTADMTHAAAPLLLDTVLARQADGTRAERAARFFD AYLHVAIPAIVGLYLRYGIALEAHQQNTFVVIDEAGMPVRLVVRDFGDVKIALPTLQAQGFSIEPFRAGHTTYPDRDIPR KKLIHAFLLCHIGELALALFPEHGSAVGLRQWHDAMQAVFEANRTALDADTWKQERHALLEAPWSFKTFVRMRLRDQSDD MHAALPNPLADAVRT >Mature_655_residues MQRRSDTAAHTETASAAAAAGNLRLESIPALRDAGVQTEHWSAAQQLARCRVLSRLLQALFREALLSADRLIADTRADVT LLPIWQQRVLLRFTGLRPGALGSWTLTGDVAVLAHDRPPTPIERPSALLHWLAPMLDMGDAAEAHRLAAIDRLAAELDNS QDNDTLCQAYRLAWGARLAAEHRTAAWQDALALLCGDGTPHALARTEQWGTGGHPWHPAYKTRLGLAPDQVIALSPEFEA QVPLGVVAVAAHRLQVTTMDGVQPYANWFAAAFPQTMAAFRKALLARQLAPEAWLPLPVHPWQRDTTLGETFAAEFAAGE LIRLPDINIAARPTMSFRTVAATDAPGGAMLKLPVSMRLTSVERTVSPKSAVMGPRVSALLERILANDAALASVLSIVPE RHGIHLAGTDDERARHLSMIVRDNPTTRIAGNARLLPVGALFTPDFTADMTHAAAPLLLDTVLARQADGTRAERAARFFD AYLHVAIPAIVGLYLRYGIALEAHQQNTFVVIDEAGMPVRLVVRDFGDVKIALPTLQAQGFSIEPFRAGHTTYPDRDIPR KKLIHAFLLCHIGELALALFPEHGSAVGLRQWHDAMQAVFEANRTALDADTWKQERHALLEAPWSFKTFVRMRLRDQSDD MHAALPNPLADAVRT
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: NA
Molecular weight: Translated: 71579; Mature: 71579
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRSDTAAHTETASAAAAAGNLRLESIPALRDAGVQTEHWSAAQQLARCRVLSRLLQAL CCCCCCCCHHHHHHHHHHHHCCCEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FREALLSADRLIADTRADVTLLPIWQQRVLLRFTGLRPGALGSWTLTGDVAVLAHDRPPT HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCCEEEECCEEEEECCCCCC PIERPSALLHWLAPMLDMGDAAEAHRLAAIDRLAAELDNSQDNDTLCQAYRLAWGARLAA CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH EHRTAAWQDALALLCGDGTPHALARTEQWGTGGHPWHPAYKTRLGLAPDQVIALSPEFEA HHHHHHHHHHHHHEECCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCC QVPLGVVAVAAHRLQVTTMDGVQPYANWFAAAFPQTMAAFRKALLARQLAPEAWLPLPVH CCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PWQRDTTLGETFAAEFAAGELIRLPDINIAARPTMSFRTVAATDAPGGAMLKLPVSMRLT CCCCCCCHHHHHHHHHCCCCEEECCCCCEEECCCCCEEEEEECCCCCCCEEEEEHHHEEH SVERTVSPKSAVMGPRVSALLERILANDAALASVLSIVPERHGIHLAGTDDERARHLSMI HHHHHCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEECCCHHHHHHEEEE VRDNPTTRIAGNARLLPVGALFTPDFTADMTHAAAPLLLDTVLARQADGTRAERAARFFD EECCCCEEEECCEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AYLHVAIPAIVGLYLRYGIALEAHQQNTFVVIDEAGMPVRLVVRDFGDVKIALPTLQAQG HHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCEEEEEECCCCEEEEEEEEECCC FSIEPFRAGHTTYPDRDIPRKKLIHAFLLCHIGELALALFPEHGSAVGLRQWHDAMQAVF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHH EANRTALDADTWKQERHALLEAPWSFKTFVRMRLRDQSDDMHAALPNPLADAVRT HCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCC >Mature Secondary Structure MQRRSDTAAHTETASAAAAAGNLRLESIPALRDAGVQTEHWSAAQQLARCRVLSRLLQAL CCCCCCCCHHHHHHHHHHHHCCCEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FREALLSADRLIADTRADVTLLPIWQQRVLLRFTGLRPGALGSWTLTGDVAVLAHDRPPT HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCCEEEECCEEEEECCCCCC PIERPSALLHWLAPMLDMGDAAEAHRLAAIDRLAAELDNSQDNDTLCQAYRLAWGARLAA CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH EHRTAAWQDALALLCGDGTPHALARTEQWGTGGHPWHPAYKTRLGLAPDQVIALSPEFEA HHHHHHHHHHHHHEECCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCC QVPLGVVAVAAHRLQVTTMDGVQPYANWFAAAFPQTMAAFRKALLARQLAPEAWLPLPVH CCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PWQRDTTLGETFAAEFAAGELIRLPDINIAARPTMSFRTVAATDAPGGAMLKLPVSMRLT CCCCCCCHHHHHHHHHCCCCEEECCCCCEEECCCCCEEEEEECCCCCCCEEEEEHHHEEH SVERTVSPKSAVMGPRVSALLERILANDAALASVLSIVPERHGIHLAGTDDERARHLSMI HHHHHCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEECCCHHHHHHEEEE VRDNPTTRIAGNARLLPVGALFTPDFTADMTHAAAPLLLDTVLARQADGTRAERAARFFD EECCCCEEEECCEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AYLHVAIPAIVGLYLRYGIALEAHQQNTFVVIDEAGMPVRLVVRDFGDVKIALPTLQAQG HHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCEEEEEECCCCEEEEEEEEECCC FSIEPFRAGHTTYPDRDIPRKKLIHAFLLCHIGELALALFPEHGSAVGLRQWHDAMQAVF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHH EANRTALDADTWKQERHALLEAPWSFKTFVRMRLRDQSDDMHAALPNPLADAVRT HCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]