Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927263
Identifier: 187927263
GI number: 187927263
Start: 172908
End: 173900
Strand: Direct
Name: 187927263
Synonym: Rpic_0155
Alternate gene names: NA
Gene position: 172908-173900 (Clockwise)
Preceding gene: 187927258
Following gene: 187927265
Centisome position: 4.39
GC content: 65.36
Gene sequence:
>993_bases ATGAAACTCGCCACCCTCAAGGATGGCTCGCGCGACGGCCAGTTGGCCGTGGTCTCGCGCGACCTCAAGACCGCTCACTT CGCCACGCACATCGCCGGCACGCTGCAGCGCGCGCTGGACGACTGGGCCTTCCACGCGCCGCAGCTGCAGGATCTGTACG ACCAGCTCAACGCGGGCCGCGCACGCCACCCGTTTGCGTTCGATGCCGCCAACTGCATGGCGCCGCTGCCGCGCGCTTAC CAGTGGGCGGATGGCTCGGCGTATTTGAATCACGTTGAACTGGTGCGCAAGGCGCGCGGCGCCGAGATGCCCCCCGAGTT CTGGACCGACCCGCTGATGTACCAGGGCGGCTCGGACGACCTAGCCGGCGCGCACGATCCCATCGTCTGCCGCAGCGAGG CGTTCGGCATCGATTTCGAAGCCGAGGTGGCTGTCATCACCGGCGACGTGCCGATGGGCACCGAGGCGGCCGCCGCTGCC GAGGGCATCCGCCTGATCGTGCTGGCCAACGATGTGTCGCTGCGCAATCTGATTCCGGCGGAGCTGGGCAAGGGTTTCGG CTTCTTCCAGAGCAAGCCGGCCACGTCGTTCTCGCCCGTCGCCGTCACGCCCGATGAATTGGGCGACGCCTGGCGCGAAC GCAAGGTACATCTGCCGATGACGGTGCGCTGGAACAACAAGAAGGTCGGCCAGCCCGAGTGCGGCACCGATATGGTGTTC GACTTCGGTCAGCTGATCGCGCACATCTGCAAAACACGCAACGTGCGTGCGGGCAGCATCGTTGGCTCGGGCACGATTTC CAACGTGGACCGCAGCAAGGGGTACGCGTGCATTGCCGAGAAACGCATGCTGGAAACCATCGAATCCGGTGCGCCCATCA CCGAATACATGCGCTACGGCGACACCGTGAAGATCGAGATGTTCGACGCCAACGGCGTGTCGATTTTCGGGGCGATCGAC CAGGAAGTTGTCGCGCCGGGCACGCAGGCGTAA
Upstream 100 bases:
>100_bases GGCGGGCAGCGGTGGCATGGTCATGGGCGATGGATCGGTTCGGGCCAGTTTAGCCGATGCAAGGTGTACCATCCGCGCAG CTTTTCTCCACACAACGCAC
Downstream 100 bases:
>100_bases GCCTTGCCCTACGCGGATTCGGGCGTCGTCCGCGGACGGCGCCCCCGCTTTGGCGCAGCGGCACCGGCCATCAGCGCCTG CCCGTGATACCCCAGACGAA
Product: fumarylacetoacetate (FAA) hydrolase
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate Hydrolase Domain-Containing; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKLATLKDGSRDGQLAVVSRDLKTAHFATHIAGTLQRALDDWAFHAPQLQDLYDQLNAGRARHPFAFDAANCMAPLPRAY QWADGSAYLNHVELVRKARGAEMPPEFWTDPLMYQGGSDDLAGAHDPIVCRSEAFGIDFEAEVAVITGDVPMGTEAAAAA EGIRLIVLANDVSLRNLIPAELGKGFGFFQSKPATSFSPVAVTPDELGDAWRERKVHLPMTVRWNNKKVGQPECGTDMVF DFGQLIAHICKTRNVRAGSIVGSGTISNVDRSKGYACIAEKRMLETIESGAPITEYMRYGDTVKIEMFDANGVSIFGAID QEVVAPGTQA
Sequences:
>Translated_330_residues MKLATLKDGSRDGQLAVVSRDLKTAHFATHIAGTLQRALDDWAFHAPQLQDLYDQLNAGRARHPFAFDAANCMAPLPRAY QWADGSAYLNHVELVRKARGAEMPPEFWTDPLMYQGGSDDLAGAHDPIVCRSEAFGIDFEAEVAVITGDVPMGTEAAAAA EGIRLIVLANDVSLRNLIPAELGKGFGFFQSKPATSFSPVAVTPDELGDAWRERKVHLPMTVRWNNKKVGQPECGTDMVF DFGQLIAHICKTRNVRAGSIVGSGTISNVDRSKGYACIAEKRMLETIESGAPITEYMRYGDTVKIEMFDANGVSIFGAID QEVVAPGTQA >Mature_330_residues MKLATLKDGSRDGQLAVVSRDLKTAHFATHIAGTLQRALDDWAFHAPQLQDLYDQLNAGRARHPFAFDAANCMAPLPRAY QWADGSAYLNHVELVRKARGAEMPPEFWTDPLMYQGGSDDLAGAHDPIVCRSEAFGIDFEAEVAVITGDVPMGTEAAAAA EGIRLIVLANDVSLRNLIPAELGKGFGFFQSKPATSFSPVAVTPDELGDAWRERKVHLPMTVRWNNKKVGQPECGTDMVF DFGQLIAHICKTRNVRAGSIVGSGTISNVDRSKGYACIAEKRMLETIESGAPITEYMRYGDTVKIEMFDANGVSIFGAID QEVVAPGTQA
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35816; Mature: 35816
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLATLKDGSRDGQLAVVSRDLKTAHFATHIAGTLQRALDDWAFHAPQLQDLYDQLNAGR CCEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC ARHPFAFDAANCMAPLPRAYQWADGSAYLNHVELVRKARGAEMPPEFWTDPLMYQGGSDD CCCCCEECCHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCC LAGAHDPIVCRSEAFGIDFEAEVAVITGDVPMGTEAAAAAEGIRLIVLANDVSLRNLIPA CCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCEEEEEEECCCCHHHCCHH ELGKGFGFFQSKPATSFSPVAVTPDELGDAWRERKVHLPMTVRWNNKKVGQPECGTDMVF HHCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCEECCCEEEEECCCCCCCCCCCHHHHH DFGQLIAHICKTRNVRAGSIVGSGTISNVDRSKGYACIAEKRMLETIESGAPITEYMRYG HHHHHHHHHHHCCCCCCCCEEECCCCCCCHHCCCEEEHHHHHHHHHHHCCCCHHHHHHCC DTVKIEMFDANGVSIFGAIDQEVVAPGTQA CEEEEEEEECCCEEEEECCCHHHCCCCCCC >Mature Secondary Structure MKLATLKDGSRDGQLAVVSRDLKTAHFATHIAGTLQRALDDWAFHAPQLQDLYDQLNAGR CCEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC ARHPFAFDAANCMAPLPRAYQWADGSAYLNHVELVRKARGAEMPPEFWTDPLMYQGGSDD CCCCCEECCHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCC LAGAHDPIVCRSEAFGIDFEAEVAVITGDVPMGTEAAAAAEGIRLIVLANDVSLRNLIPA CCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCEEEEEEECCCCHHHCCHH ELGKGFGFFQSKPATSFSPVAVTPDELGDAWRERKVHLPMTVRWNNKKVGQPECGTDMVF HHCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCEECCCEEEEECCCCCCCCCCCHHHHH DFGQLIAHICKTRNVRAGSIVGSGTISNVDRSKGYACIAEKRMLETIESGAPITEYMRYG HHHHHHHHHHHCCCCCCCCEEECCCCCCCHHCCCEEEHHHHHHHHHHHCCCCHHHHHHCC DTVKIEMFDANGVSIFGAIDQEVVAPGTQA CEEEEEEEECCCEEEEECCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA