Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is 187927198

Identifier: 187927198

GI number: 187927198

Start: 102724

End: 103749

Strand: Reverse

Name: 187927198

Synonym: Rpic_0088

Alternate gene names: NA

Gene position: 103749-102724 (Counterclockwise)

Preceding gene: 187927202

Following gene: 187927197

Centisome position: 2.63

GC content: 71.44

Gene sequence:

>1026_bases
ATGCCAAGCCGCGCAACGATGCGCTGGTGTCTGACCGCCTTGCTGGCGTGGTCCGGTCACGCCCTGGCGTGGGACTACAC
GCCTGGCGCCATTCCGGGGCTGATCAGCGTGCTTGGGTTCCTGACCGTGCAGTCGCAGGCGCTCGACCGCGCCATCCAGC
GCTTTCCCGGCCAGCGTGAGGAGCTGATCCGCGCCCGTACCCAGTTCGACAACACCTTCCCGCAGGCGCTGGCCCGCACC
CGCCGCCTGATCGCCGGCATTCCGCTATCCGACGACGAGCGCCAACTGCTGATCGAGCGCGCGCTGGACCTCCACCAGCC
CAGCGTGGGCGTTGCCACCCAGACGGCCGAGACCGCCCACTCGCTGGCCGAACGCGTGGTTGCGCGTGCGCAGGGCAGCC
AGGACCGCGCCACGCTGCAGACCCTGCTGGCGGTGGTCTACGACGACCGCCCCGCCGATGAGCTGGGCAGCCGCTTTACC
CAGGCCGTGACCCTGTCTGACTGGCCGAATGCGCGCGGCGCGAGCCTCGCCCTGCGGCTGCCGTTCTCGTGGGAACGCGT
GCCGCCCACGGCGCCGCGCAAGCCCGACCCGGCACGGGTGGCGATCGGCGCGTGGGCCAATCAGGGCGGCTCTGGGCTGT
CGCGCATTGAGCTCATCGTGCGCCCCACCGAAGGCGACCCCGAAACCGTGCCCGACAGCCGCGAGCCGCGCTGGATGCGC
GATGCCGTGAAGCAAGCCGTGGCGGCCCCCTGCCGACTGCTCGGCTGGGGTACGCAATCGTTCGGCGGGCGCATCGGCGT
GTGGGCCAGCTACATCGGCGAATCGCCCGGGCCGAATATCCCGCGCGCCCCCGGCAACACGCTGGTCGGCCGCGTCTTCA
TGGTGCCGACCGACGGCGCGCTGCTGATGCTGCACATGCAGTCTCTCGCCACATCGCCCGAGCAGGCCAGCGCCGTGCGC
TTGCGGTACGAACCATTGTGGGACGCCGTGGCCGCGTCGTTCAGCGTGTCCGGCGCCAAGCCGTAG

Upstream 100 bases:

>100_bases
GGTCCGATCTCGGTGCAACACCCATCTTGCACACAATCGATACAAATCGTTAGAGTCGGATTTCGGTCGGAAACGGGTCC
GACCACAGGGGGAACTTCCA

Downstream 100 bases:

>100_bases
CGCCTGTCAGAACGGCGCAACGCACCATCAAAGCGCACGCGCAGCGCCAGATGCACCAATTCAAAGCAAGAACGCACCGA
TTTCGGGCCACGGCCGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MPSRATMRWCLTALLAWSGHALAWDYTPGAIPGLISVLGFLTVQSQALDRAIQRFPGQREELIRARTQFDNTFPQALART
RRLIAGIPLSDDERQLLIERALDLHQPSVGVATQTAETAHSLAERVVARAQGSQDRATLQTLLAVVYDDRPADELGSRFT
QAVTLSDWPNARGASLALRLPFSWERVPPTAPRKPDPARVAIGAWANQGGSGLSRIELIVRPTEGDPETVPDSREPRWMR
DAVKQAVAAPCRLLGWGTQSFGGRIGVWASYIGESPGPNIPRAPGNTLVGRVFMVPTDGALLMLHMQSLATSPEQASAVR
LRYEPLWDAVAASFSVSGAKP

Sequences:

>Translated_341_residues
MPSRATMRWCLTALLAWSGHALAWDYTPGAIPGLISVLGFLTVQSQALDRAIQRFPGQREELIRARTQFDNTFPQALART
RRLIAGIPLSDDERQLLIERALDLHQPSVGVATQTAETAHSLAERVVARAQGSQDRATLQTLLAVVYDDRPADELGSRFT
QAVTLSDWPNARGASLALRLPFSWERVPPTAPRKPDPARVAIGAWANQGGSGLSRIELIVRPTEGDPETVPDSREPRWMR
DAVKQAVAAPCRLLGWGTQSFGGRIGVWASYIGESPGPNIPRAPGNTLVGRVFMVPTDGALLMLHMQSLATSPEQASAVR
LRYEPLWDAVAASFSVSGAKP
>Mature_340_residues
PSRATMRWCLTALLAWSGHALAWDYTPGAIPGLISVLGFLTVQSQALDRAIQRFPGQREELIRARTQFDNTFPQALARTR
RLIAGIPLSDDERQLLIERALDLHQPSVGVATQTAETAHSLAERVVARAQGSQDRATLQTLLAVVYDDRPADELGSRFTQ
AVTLSDWPNARGASLALRLPFSWERVPPTAPRKPDPARVAIGAWANQGGSGLSRIELIVRPTEGDPETVPDSREPRWMRD
AVKQAVAAPCRLLGWGTQSFGGRIGVWASYIGESPGPNIPRAPGNTLVGRVFMVPTDGALLMLHMQSLATSPEQASAVRL
RYEPLWDAVAASFSVSGAKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37049; Mature: 36917

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRATMRWCLTALLAWSGHALAWDYTPGAIPGLISVLGFLTVQSQALDRAIQRFPGQRE
CCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELIRARTQFDNTFPQALARTRRLIAGIPLSDDERQLLIERALDLHQPSVGVATQTAETAH
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
SLAERVVARAQGSQDRATLQTLLAVVYDDRPADELGSRFTQAVTLSDWPNARGASLALRL
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCEEEEEC
PFSWERVPPTAPRKPDPARVAIGAWANQGGSGLSRIELIVRPTEGDPETVPDSREPRWMR
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHH
DAVKQAVAAPCRLLGWGTQSFGGRIGVWASYIGESPGPNIPRAPGNTLVGRVFMVPTDGA
HHHHHHHHCCHHHHCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCH
LLMLHMQSLATSPEQASAVRLRYEPLWDAVAASFSVSGAKP
HHHHHHHHHCCCCCHHHEEEEECHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSRATMRWCLTALLAWSGHALAWDYTPGAIPGLISVLGFLTVQSQALDRAIQRFPGQRE
CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELIRARTQFDNTFPQALARTRRLIAGIPLSDDERQLLIERALDLHQPSVGVATQTAETAH
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
SLAERVVARAQGSQDRATLQTLLAVVYDDRPADELGSRFTQAVTLSDWPNARGASLALRL
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCEEEEEC
PFSWERVPPTAPRKPDPARVAIGAWANQGGSGLSRIELIVRPTEGDPETVPDSREPRWMR
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHH
DAVKQAVAAPCRLLGWGTQSFGGRIGVWASYIGESPGPNIPRAPGNTLVGRVFMVPTDGA
HHHHHHHHCCHHHHCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCH
LLMLHMQSLATSPEQASAVRLRYEPLWDAVAASFSVSGAKP
HHHHHHHHHCCCCCHHHEEEEECHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA