Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927198
Identifier: 187927198
GI number: 187927198
Start: 102724
End: 103749
Strand: Reverse
Name: 187927198
Synonym: Rpic_0088
Alternate gene names: NA
Gene position: 103749-102724 (Counterclockwise)
Preceding gene: 187927202
Following gene: 187927197
Centisome position: 2.63
GC content: 71.44
Gene sequence:
>1026_bases ATGCCAAGCCGCGCAACGATGCGCTGGTGTCTGACCGCCTTGCTGGCGTGGTCCGGTCACGCCCTGGCGTGGGACTACAC GCCTGGCGCCATTCCGGGGCTGATCAGCGTGCTTGGGTTCCTGACCGTGCAGTCGCAGGCGCTCGACCGCGCCATCCAGC GCTTTCCCGGCCAGCGTGAGGAGCTGATCCGCGCCCGTACCCAGTTCGACAACACCTTCCCGCAGGCGCTGGCCCGCACC CGCCGCCTGATCGCCGGCATTCCGCTATCCGACGACGAGCGCCAACTGCTGATCGAGCGCGCGCTGGACCTCCACCAGCC CAGCGTGGGCGTTGCCACCCAGACGGCCGAGACCGCCCACTCGCTGGCCGAACGCGTGGTTGCGCGTGCGCAGGGCAGCC AGGACCGCGCCACGCTGCAGACCCTGCTGGCGGTGGTCTACGACGACCGCCCCGCCGATGAGCTGGGCAGCCGCTTTACC CAGGCCGTGACCCTGTCTGACTGGCCGAATGCGCGCGGCGCGAGCCTCGCCCTGCGGCTGCCGTTCTCGTGGGAACGCGT GCCGCCCACGGCGCCGCGCAAGCCCGACCCGGCACGGGTGGCGATCGGCGCGTGGGCCAATCAGGGCGGCTCTGGGCTGT CGCGCATTGAGCTCATCGTGCGCCCCACCGAAGGCGACCCCGAAACCGTGCCCGACAGCCGCGAGCCGCGCTGGATGCGC GATGCCGTGAAGCAAGCCGTGGCGGCCCCCTGCCGACTGCTCGGCTGGGGTACGCAATCGTTCGGCGGGCGCATCGGCGT GTGGGCCAGCTACATCGGCGAATCGCCCGGGCCGAATATCCCGCGCGCCCCCGGCAACACGCTGGTCGGCCGCGTCTTCA TGGTGCCGACCGACGGCGCGCTGCTGATGCTGCACATGCAGTCTCTCGCCACATCGCCCGAGCAGGCCAGCGCCGTGCGC TTGCGGTACGAACCATTGTGGGACGCCGTGGCCGCGTCGTTCAGCGTGTCCGGCGCCAAGCCGTAG
Upstream 100 bases:
>100_bases GGTCCGATCTCGGTGCAACACCCATCTTGCACACAATCGATACAAATCGTTAGAGTCGGATTTCGGTCGGAAACGGGTCC GACCACAGGGGGAACTTCCA
Downstream 100 bases:
>100_bases CGCCTGTCAGAACGGCGCAACGCACCATCAAAGCGCACGCGCAGCGCCAGATGCACCAATTCAAAGCAAGAACGCACCGA TTTCGGGCCACGGCCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPSRATMRWCLTALLAWSGHALAWDYTPGAIPGLISVLGFLTVQSQALDRAIQRFPGQREELIRARTQFDNTFPQALART RRLIAGIPLSDDERQLLIERALDLHQPSVGVATQTAETAHSLAERVVARAQGSQDRATLQTLLAVVYDDRPADELGSRFT QAVTLSDWPNARGASLALRLPFSWERVPPTAPRKPDPARVAIGAWANQGGSGLSRIELIVRPTEGDPETVPDSREPRWMR DAVKQAVAAPCRLLGWGTQSFGGRIGVWASYIGESPGPNIPRAPGNTLVGRVFMVPTDGALLMLHMQSLATSPEQASAVR LRYEPLWDAVAASFSVSGAKP
Sequences:
>Translated_341_residues MPSRATMRWCLTALLAWSGHALAWDYTPGAIPGLISVLGFLTVQSQALDRAIQRFPGQREELIRARTQFDNTFPQALART RRLIAGIPLSDDERQLLIERALDLHQPSVGVATQTAETAHSLAERVVARAQGSQDRATLQTLLAVVYDDRPADELGSRFT QAVTLSDWPNARGASLALRLPFSWERVPPTAPRKPDPARVAIGAWANQGGSGLSRIELIVRPTEGDPETVPDSREPRWMR DAVKQAVAAPCRLLGWGTQSFGGRIGVWASYIGESPGPNIPRAPGNTLVGRVFMVPTDGALLMLHMQSLATSPEQASAVR LRYEPLWDAVAASFSVSGAKP >Mature_340_residues PSRATMRWCLTALLAWSGHALAWDYTPGAIPGLISVLGFLTVQSQALDRAIQRFPGQREELIRARTQFDNTFPQALARTR RLIAGIPLSDDERQLLIERALDLHQPSVGVATQTAETAHSLAERVVARAQGSQDRATLQTLLAVVYDDRPADELGSRFTQ AVTLSDWPNARGASLALRLPFSWERVPPTAPRKPDPARVAIGAWANQGGSGLSRIELIVRPTEGDPETVPDSREPRWMRD AVKQAVAAPCRLLGWGTQSFGGRIGVWASYIGESPGPNIPRAPGNTLVGRVFMVPTDGALLMLHMQSLATSPEQASAVRL RYEPLWDAVAASFSVSGAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37049; Mature: 36917
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRATMRWCLTALLAWSGHALAWDYTPGAIPGLISVLGFLTVQSQALDRAIQRFPGQRE CCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ELIRARTQFDNTFPQALARTRRLIAGIPLSDDERQLLIERALDLHQPSVGVATQTAETAH HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH SLAERVVARAQGSQDRATLQTLLAVVYDDRPADELGSRFTQAVTLSDWPNARGASLALRL HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCEEEEEC PFSWERVPPTAPRKPDPARVAIGAWANQGGSGLSRIELIVRPTEGDPETVPDSREPRWMR CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHH DAVKQAVAAPCRLLGWGTQSFGGRIGVWASYIGESPGPNIPRAPGNTLVGRVFMVPTDGA HHHHHHHHCCHHHHCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCH LLMLHMQSLATSPEQASAVRLRYEPLWDAVAASFSVSGAKP HHHHHHHHHCCCCCHHHEEEEECHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PSRATMRWCLTALLAWSGHALAWDYTPGAIPGLISVLGFLTVQSQALDRAIQRFPGQRE CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ELIRARTQFDNTFPQALARTRRLIAGIPLSDDERQLLIERALDLHQPSVGVATQTAETAH HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH SLAERVVARAQGSQDRATLQTLLAVVYDDRPADELGSRFTQAVTLSDWPNARGASLALRL HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCEEEEEC PFSWERVPPTAPRKPDPARVAIGAWANQGGSGLSRIELIVRPTEGDPETVPDSREPRWMR CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHH DAVKQAVAAPCRLLGWGTQSFGGRIGVWASYIGESPGPNIPRAPGNTLVGRVFMVPTDGA HHHHHHHHCCHHHHCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCH LLMLHMQSLATSPEQASAVRLRYEPLWDAVAASFSVSGAKP HHHHHHHHHCCCCCHHHEEEEECHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA