Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927196
Identifier: 187927196
GI number: 187927196
Start: 100821
End: 101177
Strand: Reverse
Name: 187927196
Synonym: Rpic_0086
Alternate gene names: NA
Gene position: 101177-100821 (Counterclockwise)
Preceding gene: 187927197
Following gene: 187927194
Centisome position: 2.57
GC content: 64.15
Gene sequence:
>357_bases ATGCCAGAAATCGATCCGAACCACCCCATCACCGTCGAGTCGAACCCGCGCCGCGTGACCGTGACCCTCAACGGTTTCAC CATCGCCAGCACGCATCTGGCGCGCACGCTGCGCGAGGCGTCGTACCCGCCGGTGCAGTACATCCCGCGCGACGATGTGC AGATGAACCTGCTGGAGCGCACGCAGCATCACACCCATTGCCCGTACAAGGGCGATGCGTCGTACTACACGATCGTGGCC GGCGATGTGCGCGCCGACAACGCCGTCTGGACGTACGAACAGCCCAAGCCCGTGGCGCGCGAGGTGGCCGGCTATCTGGC GTTCTATCCGAACAAGGTGACGATCCAGGAGGAATGA
Upstream 100 bases:
>100_bases GGAAACGCACTGGTAAGCGGAAGCCTGCAGCCAGAGGAAGGCGCGCGCGGCGCTTGCTACAGTGAAAGCGTCTTCCCTCG CCCAACTGCAGGAGTGCCGC
Downstream 100 bases:
>100_bases GGACGCAGGCGCGGCTGACATGCCGCTGTCATGCGGGCGGCGCACGATGCGCCTGTTCCTCTTCTCACGGATCCTCTTTC CGTGAAAGTTCCGAGACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MPEIDPNHPITVESNPRRVTVTLNGFTIASTHLARTLREASYPPVQYIPRDDVQMNLLERTQHHTHCPYKGDASYYTIVA GDVRADNAVWTYEQPKPVAREVAGYLAFYPNKVTIQEE
Sequences:
>Translated_118_residues MPEIDPNHPITVESNPRRVTVTLNGFTIASTHLARTLREASYPPVQYIPRDDVQMNLLERTQHHTHCPYKGDASYYTIVA GDVRADNAVWTYEQPKPVAREVAGYLAFYPNKVTIQEE >Mature_117_residues PEIDPNHPITVESNPRRVTVTLNGFTIASTHLARTLREASYPPVQYIPRDDVQMNLLERTQHHTHCPYKGDASYYTIVAG DVRADNAVWTYEQPKPVAREVAGYLAFYPNKVTIQEE
Specific function: Unknown
COG id: COG2343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13454; Mature: 13323
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIDPNHPITVESNPRRVTVTLNGFTIASTHLARTLREASYPPVQYIPRDDVQMNLLER CCCCCCCCCEEECCCCCEEEEEECCEEEEHHHHHHHHHHCCCCCEECCCCCCCEEHHHHH TQHHTHCPYKGDASYYTIVAGDVRADNAVWTYEQPKPVAREVAGYLAFYPNKVTIQEE CCCCCCCCCCCCCCEEEEEECCEECCCEEEEECCCCHHHHHHHHHHEECCCEEEEECC >Mature Secondary Structure PEIDPNHPITVESNPRRVTVTLNGFTIASTHLARTLREASYPPVQYIPRDDVQMNLLER CCCCCCCCEEECCCCCEEEEEECCEEEEHHHHHHHHHHCCCCCEECCCCCCCEEHHHHH TQHHTHCPYKGDASYYTIVAGDVRADNAVWTYEQPKPVAREVAGYLAFYPNKVTIQEE CCCCCCCCCCCCCCEEEEEECCEECCCEEEEECCCCHHHHHHHHHHEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA