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The map label for this gene is ylbK [H]

Identifier: 187927175

GI number: 187927175

Start: 79111

End: 80031

Strand: Direct

Name: ylbK [H]

Synonym: Rpic_0065

Alternate gene names: 187927175

Gene position: 79111-80031 (Clockwise)

Preceding gene: 187927174

Following gene: 187927176

Centisome position: 2.01

GC content: 70.25

Gene sequence:

>921_bases
ATGGACAGAGTGGAACGAACAGCGTTTGTCTTTGCCGGTGGCGGCAGCCTCGGCGCCATCGAGGCCGGCATGCTGCGCGA
GCTGGTGGCCTCGGGCGTGGTGCCCGACATGGTGGTGGGCGCCTCAGCCGGCGCCATCAACGCTGCCTTTTTTGCGTGCA
ATCCGCACGCGGCCGGCACCGCGCAGCTCGAGGCGCTGTGGCGCGGTGTGCGGCGCGCCGACGTGATGCCGTGGTCTTGG
CGTGCAATGTTCAGCATGCTGGGCATCCTGGGCGGGCGACGCGAGCACCTCGTCGATGCATCCGGCCTGCAGCGCCTGCT
GACGCGGCATTTCGCGCAGACCCTGCTGGAGGCGGCCACGCTGCCCCTGCACGTTGTGGCCACCGACATGCGCACCGGCG
CCGAGGTGGTGCTGTCGTCTGGCGCCATCGTGCCGGCCGTGCTGGCCAGCGCTGCCATTCCCGGCGTGTTTCCGCCGGTG
CGCATTGGTGATCGCCTGTTGATCGACGGCGGCGTTGCCAACAACACGCCGATCTCTGCGGCCATCCGGCTGGGCGCCAC
ACGCGTCGTCGTGTTGCCGGCCGGGTTTGCGTGTGCCGACCGTCGTGCCCCGCGCAGCGCCATCGAGCACGCGCTGAACG
CCTTGTCACTGCTGGTCGCGCGCCAGCTTGTGCAAGACCTGGAGCGCTGGGCTGGGCAGGTGCCCATTGCCGTCGTGCCG
CCGCTGTGCCCGCTGGACGTGTCGCCCTACGACTACGCCCGCTGCGGCGAACTGATCGACCGCGCTGCTGCGGCCACGGC
GGCATGGCTCGCAGCCGATGGTCTGGCGGGCACCGGCATCCCGGGCGCGCTGCGTGCGCACGACCACAACGAAGATCACC
CGAACTGCAGCGCAGACCTCCACGGCATGCCCACGGCTTGA

Upstream 100 bases:

>100_bases
GACCGGCCCGACTAGCTGCAACGGCGGGGCAGACCTACTCTAGTTCCAGTCGTCCCTTGATTGACCAGTTGGGACTCCTT
GCTGCAACGCGGCATCGATC

Downstream 100 bases:

>100_bases
TGCGGCAGCGTGGCATTTTCTGTCCGGCGTTGAAACTGAATCTGCGCGGCGCGGCTGTTTCCCCTGGCGTGGCGCGCCCA
TGATGCGGCTATCCAACGAT

Product: Patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MDRVERTAFVFAGGGSLGAIEAGMLRELVASGVVPDMVVGASAGAINAAFFACNPHAAGTAQLEALWRGVRRADVMPWSW
RAMFSMLGILGGRREHLVDASGLQRLLTRHFAQTLLEAATLPLHVVATDMRTGAEVVLSSGAIVPAVLASAAIPGVFPPV
RIGDRLLIDGGVANNTPISAAIRLGATRVVVLPAGFACADRRAPRSAIEHALNALSLLVARQLVQDLERWAGQVPIAVVP
PLCPLDVSPYDYARCGELIDRAAAATAAWLAADGLAGTGIPGALRAHDHNEDHPNCSADLHGMPTA

Sequences:

>Translated_306_residues
MDRVERTAFVFAGGGSLGAIEAGMLRELVASGVVPDMVVGASAGAINAAFFACNPHAAGTAQLEALWRGVRRADVMPWSW
RAMFSMLGILGGRREHLVDASGLQRLLTRHFAQTLLEAATLPLHVVATDMRTGAEVVLSSGAIVPAVLASAAIPGVFPPV
RIGDRLLIDGGVANNTPISAAIRLGATRVVVLPAGFACADRRAPRSAIEHALNALSLLVARQLVQDLERWAGQVPIAVVP
PLCPLDVSPYDYARCGELIDRAAAATAAWLAADGLAGTGIPGALRAHDHNEDHPNCSADLHGMPTA
>Mature_306_residues
MDRVERTAFVFAGGGSLGAIEAGMLRELVASGVVPDMVVGASAGAINAAFFACNPHAAGTAQLEALWRGVRRADVMPWSW
RAMFSMLGILGGRREHLVDASGLQRLLTRHFAQTLLEAATLPLHVVATDMRTGAEVVLSSGAIVPAVLASAAIPGVFPPV
RIGDRLLIDGGVANNTPISAAIRLGATRVVVLPAGFACADRRAPRSAIEHALNALSLLVARQLVQDLERWAGQVPIAVVP
PLCPLDVSPYDYARCGELIDRAAAATAAWLAADGLAGTGIPGALRAHDHNEDHPNCSADLHGMPTA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI116256487, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI260656039, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI260656043, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI260656037, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31837; Mature: 31837

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVERTAFVFAGGGSLGAIEAGMLRELVASGVVPDMVVGASAGAINAAFFACNPHAAGT
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEECCCCCCH
AQLEALWRGVRRADVMPWSWRAMFSMLGILGGRREHLVDASGLQRLLTRHFAQTLLEAAT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHC
LPLHVVATDMRTGAEVVLSSGAIVPAVLASAAIPGVFPPVRIGDRLLIDGGVANNTPISA
CCCEEEECCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHH
AIRLGATRVVVLPAGFACADRRAPRSAIEHALNALSLLVARQLVQDLERWAGQVPIAVVP
HHHHCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PLCPLDVSPYDYARCGELIDRAAAATAAWLAADGLAGTGIPGALRAHDHNEDHPNCSADL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HGMPTA
CCCCCC
>Mature Secondary Structure
MDRVERTAFVFAGGGSLGAIEAGMLRELVASGVVPDMVVGASAGAINAAFFACNPHAAGT
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEECCCCCCH
AQLEALWRGVRRADVMPWSWRAMFSMLGILGGRREHLVDASGLQRLLTRHFAQTLLEAAT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHC
LPLHVVATDMRTGAEVVLSSGAIVPAVLASAAIPGVFPPVRIGDRLLIDGGVANNTPISA
CCCEEEECCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHH
AIRLGATRVVVLPAGFACADRRAPRSAIEHALNALSLLVARQLVQDLERWAGQVPIAVVP
HHHHCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PLCPLDVSPYDYARCGELIDRAAAATAAWLAADGLAGTGIPGALRAHDHNEDHPNCSADL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HGMPTA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]