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The map label for this gene is ybhS [H]

Identifier: 187927167

GI number: 187927167

Start: 69251

End: 70414

Strand: Direct

Name: ybhS [H]

Synonym: Rpic_0057

Alternate gene names: 187927167

Gene position: 69251-70414 (Clockwise)

Preceding gene: 187927166

Following gene: 187927168

Centisome position: 1.76

GC content: 62.2

Gene sequence:

>1164_bases
ATGAAGCCAGAGGGCAATCGGTTTTCGCTTGTGCGCTGGTGGAGCGTGGTGCTCAAGGAGTTTCTGCAACTTCGCCGCGA
CCGCGTGACGTTCGCGATGATGATCGGCATTCCGATCATGCAGCTGATCCTGTTCGGTTTTGCCATCAACGCCGACCCGA
GGCACCTGCTGACCGGCGTAATCGCCGCCGACCAGAGCGAGTTCACGCGCAGCTTCCTGGCCAGCATGCGCAACTCCGAC
TACTTCGACCTGGCGACCACGCTGACAGACGAAACCGCCGGGCGCGAGGCGTTGTCCAAGGGGCAGCTTCAGTTTGTCGT
ATCGATCCCGCCGGACTTCACGCGCAAGCTCGTACGCGGCGAGAAACCCTCGCTGCTCGTGGAGGCCGATGCCACCGACC
CTGCCGCTACCGGCCTCGCCGTGGCCTCGCTCTCGCAACTGGTGCAGGGCGTCGTCAGCAAGGATATGAAGGGCGCGCTG
TCGTCGCTGGCTGGAGGTGCTGGCACCAACGGTGCGGCGCCGCCATTCGATGTGCGCATCCACAAGCTGTACAACCCGGA
AGGCATCACGCAATACAACATCATCCCCGGCCTGATGGGCACCATCCTGACGATGACCATGGTGATGATGACGGGCCTGG
CCATGACGCGCGAGCGCGAGCGCGGCACGATGGAAAACCTGCTCGCCACGCCGGTGCATCCGCTGGAGGTGATGACGGGC
AAGATCGTGCCGTACATCTCCATCGGGCTGGTGCAGGTGACCATCATCCTGCTGATGGCGTTCTTCGTTTTCCACGTGCC
GTTCGTCGGCAGTGTGTGGATGGTCTACGTGTCGGCGCTGCTGTTTATCGTGGCGAGCCTGACGGTGGGGATTACGTTGT
CGTCGCTGGCGCAGAACCAGCTGCAGGCGACGCAGCTGACCTTCTTCTACTTCCTGCCGAACATCCTGCTCTCGGGCTTC
ATGTTCCCGTTCGTGGGCATGCCGAAGTGGGCGCAGGTGATCGGCAACCTGCTGCCGATGACGTACTTCAACCGGCTCAC
GCGCGGCATCCTGCTCAAGGGCAATGGCTGGTTCGAGCTGTGGCCGAGCATCTGGCCGTTGATGGTGTTTACGGTGGTGG
TGCTGGGGGTGGCGTTGCGGTTTTATCGCAAGACGTTGGATTGA

Upstream 100 bases:

>100_bases
CCGGAGAATCCGGTATGCGCGCCGAGCCGATCGACACCGGCCTCGAAGACGTGTTCATCCACATGATGAGGCGCTCCTCC
GACAATTACGGGACGCAGCC

Downstream 100 bases:

>100_bases
GGTGGCTATGTGGACGCTGTGGATTCGACGCGCTGACGGTGGTGGTGCATCCCTTGTTTCGTCCCCTGCCGGGGCCGACT
TACTTTCTTTGTCTTGCCAA

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MKPEGNRFSLVRWWSVVLKEFLQLRRDRVTFAMMIGIPIMQLILFGFAINADPRHLLTGVIAADQSEFTRSFLASMRNSD
YFDLATTLTDETAGREALSKGQLQFVVSIPPDFTRKLVRGEKPSLLVEADATDPAATGLAVASLSQLVQGVVSKDMKGAL
SSLAGGAGTNGAAPPFDVRIHKLYNPEGITQYNIIPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVHPLEVMTG
KIVPYISIGLVQVTIILLMAFFVFHVPFVGSVWMVYVSALLFIVASLTVGITLSSLAQNQLQATQLTFFYFLPNILLSGF
MFPFVGMPKWAQVIGNLLPMTYFNRLTRGILLKGNGWFELWPSIWPLMVFTVVVLGVALRFYRKTLD

Sequences:

>Translated_387_residues
MKPEGNRFSLVRWWSVVLKEFLQLRRDRVTFAMMIGIPIMQLILFGFAINADPRHLLTGVIAADQSEFTRSFLASMRNSD
YFDLATTLTDETAGREALSKGQLQFVVSIPPDFTRKLVRGEKPSLLVEADATDPAATGLAVASLSQLVQGVVSKDMKGAL
SSLAGGAGTNGAAPPFDVRIHKLYNPEGITQYNIIPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVHPLEVMTG
KIVPYISIGLVQVTIILLMAFFVFHVPFVGSVWMVYVSALLFIVASLTVGITLSSLAQNQLQATQLTFFYFLPNILLSGF
MFPFVGMPKWAQVIGNLLPMTYFNRLTRGILLKGNGWFELWPSIWPLMVFTVVVLGVALRFYRKTLD
>Mature_387_residues
MKPEGNRFSLVRWWSVVLKEFLQLRRDRVTFAMMIGIPIMQLILFGFAINADPRHLLTGVIAADQSEFTRSFLASMRNSD
YFDLATTLTDETAGREALSKGQLQFVVSIPPDFTRKLVRGEKPSLLVEADATDPAATGLAVASLSQLVQGVVSKDMKGAL
SSLAGGAGTNGAAPPFDVRIHKLYNPEGITQYNIIPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVHPLEVMTG
KIVPYISIGLVQVTIILLMAFFVFHVPFVGSVWMVYVSALLFIVASLTVGITLSSLAQNQLQATQLTFFYFLPNILLSGF
MFPFVGMPKWAQVIGNLLPMTYFNRLTRGILLKGNGWFELWPSIWPLMVFTVVVLGVALRFYRKTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=346, Percent_Identity=30.3468208092486, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1787010, Length=373, Percent_Identity=27.6139410187668, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI48994943, Length=381, Percent_Identity=28.3464566929134, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI226510979, Length=335, Percent_Identity=29.8507462686567, Blast_Score=117, Evalue=1e-27,
Organism=Drosophila melanogaster, GI85725260, Length=367, Percent_Identity=23.1607629427793, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI85725262, Length=395, Percent_Identity=22.5316455696203, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24650853, Length=361, Percent_Identity=24.6537396121884, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24650855, Length=361, Percent_Identity=24.6537396121884, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42858; Mature: 42858

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPEGNRFSLVRWWSVVLKEFLQLRRDRVTFAMMIGIPIMQLILFGFAINADPRHLLTGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IAADQSEFTRSFLASMRNSDYFDLATTLTDETAGREALSKGQLQFVVSIPPDFTRKLVRG
HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEEECCCHHHHHHHCC
EKPSLLVEADATDPAATGLAVASLSQLVQGVVSKDMKGALSSLAGGAGTNGAAPPFDVRI
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
HKLYNPEGITQYNIIPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVHPLEVMTG
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHC
KIVPYISIGLVQVTIILLMAFFVFHVPFVGSVWMVYVSALLFIVASLTVGITLSSLAQNQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQATQLTFFYFLPNILLSGFMFPFVGMPKWAQVIGNLLPMTYFNRLTRGILLKGNGWFEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHH
WPSIWPLMVFTVVVLGVALRFYRKTLD
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPEGNRFSLVRWWSVVLKEFLQLRRDRVTFAMMIGIPIMQLILFGFAINADPRHLLTGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IAADQSEFTRSFLASMRNSDYFDLATTLTDETAGREALSKGQLQFVVSIPPDFTRKLVRG
HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEEECCCHHHHHHHCC
EKPSLLVEADATDPAATGLAVASLSQLVQGVVSKDMKGALSSLAGGAGTNGAAPPFDVRI
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
HKLYNPEGITQYNIIPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVHPLEVMTG
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHC
KIVPYISIGLVQVTIILLMAFFVFHVPFVGSVWMVYVSALLFIVASLTVGITLSSLAQNQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQATQLTFFYFLPNILLSGFMFPFVGMPKWAQVIGNLLPMTYFNRLTRGILLKGNGWFEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHH
WPSIWPLMVFTVVVLGVALRFYRKTLD
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]