Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918577
Identifier: 187918577
GI number: 187918577
Start: 767482
End: 768930
Strand: Direct
Name: 187918577
Synonym: BH0722
Alternate gene names: NA
Gene position: 767482-768930 (Clockwise)
Preceding gene: 187918576
Following gene: 187918579
Centisome position: 83.21
GC content: 27.67
Gene sequence:
>1449_bases TTGGCAAGTATGAGAAGTAATTTCTTATTAATATTTGTTTGGCTACTAATTGGTTTTTATTCTCATGCTCAGTTAAAGCA GGTGTTAACGGAAGTTGAGCCTTTAAGTATTTCAAGTGAAAGTGGAAAGGGAAGTATTTATCTGAAGGTCAATAAGTCTT CTAATTATATCTTAACTTTTGATATTTCTCTAGGTTCAGATTTTGTCTATATGGTGTATGATGTCTTGAATAAGAAATAT ATAACAGATAAGATAAGGAAAAGGGATGTTAAGCTTAAATTGCATAAAGATATTCTTTATGCTGTTATCTATGTCACATC TGAGAATGCAAATATTAATTTTGTCCTTGCTGATTTAGATTTGTCAATAATAAGTGATGATGCTTTAAGAGCTAAAATAT CCAATATAAAAAAACAAGATAAGACTTTTTTATTAAGGGATTTGCCAAGTTTTAAACTAGGGGCAAAGCTTAAAAAATAT ATTTTAAGGACTTATAGTCGTAATATTTACCTTGCTTATCAGATGGAAAATAGTGATAACATTAAGGTTTCTTCATTTAT TGAAAATATTGGTTGGTTTGATATAAGTACTGCTGTTAATGATAATATTACTGATATTGCGTGTTTTGATTTTGCAGTTA ATTCTAAAGGGGAATTATATGTTGTATTTACTACTAAGAGTACTGATGATTTTTCTAGCGAACTTATAGTTAAAAAATTT AATAGTAGAAAGTGGATTGATATTAGTCCTAAATTTAGGACTAATATTGGATTTTTGGTAAATATTAGCATTGATAAGAG AGATAATCTGTATGTAGCTTACTTAAAGAAAGTTGGCAGTGAATATAAAGTAAATTTTGTTGCAAATAGAGGATATAGTA ATATTTGGAATAATGTTATGGATTCTTATATGTCTAAAGGTGATGCCTATGTTGATGTTTCAAGTATTGGTATCATTTCT GAACCTTTTTTGGGAATTTTTTATAATTATAAAGTAAATGATTATGTTAATTCTGAGTTTATTGTTGATAGGGGCAAAAC TTGGGCAAATGCAAATATTCAGTCTGCAAATATGGCAGATTCTGTCAAGCTTCTTTCTAATTTTAAATCTGGTCAGGTTG TTTTAAGTTATATAACAAAGGATAGACCTATTGTAAGTGTATTTTCCCTGCAAGATGATAAATGGAAAAATATAAGTCCA AATATTAGGATCAAGGGGATAACTAGTGATATTTTAAGTTATAGAAATGATTTGTTATTAACGTTTGAAGATGGTGATGA TATCAGACTTATTTATTTTGATGAGGATAATTGGTATTTTTTAAATGAATCTGAAATTTTTCAGAAATCTGCTTGTAAGC CTCAGTTTGCAAAATATCAAGACGAAGGATTTATATTATCATATTTGAGTTTAGATTTTAAAGTTTTATCCTTTAAATTG ATTAGCTAG
Upstream 100 bases:
>100_bases CTAGATTTTAATTTTTCTTTTATTGTTGGAATAATATATGCTATTTCTGCCTTTTTGACTCTCATATCATTAATTGATTA TATTGTAATATTTTTGGATC
Downstream 100 bases:
>100_bases TATTAATTCAAAGTATGATTTTTTTTCAATGTTGTTTTGTAGTTTAAATTCTTTTATTGTTTCGTAAATTTCTGTCTTGG CAAGACTTAATTCATTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MASMRSNFLLIFVWLLIGFYSHAQLKQVLTEVEPLSISSESGKGSIYLKVNKSSNYILTFDISLGSDFVYMVYDVLNKKY ITDKIRKRDVKLKLHKDILYAVIYVTSENANINFVLADLDLSIISDDALRAKISNIKKQDKTFLLRDLPSFKLGAKLKKY ILRTYSRNIYLAYQMENSDNIKVSSFIENIGWFDISTAVNDNITDIACFDFAVNSKGELYVVFTTKSTDDFSSELIVKKF NSRKWIDISPKFRTNIGFLVNISIDKRDNLYVAYLKKVGSEYKVNFVANRGYSNIWNNVMDSYMSKGDAYVDVSSIGIIS EPFLGIFYNYKVNDYVNSEFIVDRGKTWANANIQSANMADSVKLLSNFKSGQVVLSYITKDRPIVSVFSLQDDKWKNISP NIRIKGITSDILSYRNDLLLTFEDGDDIRLIYFDEDNWYFLNESEIFQKSACKPQFAKYQDEGFILSYLSLDFKVLSFKL IS
Sequences:
>Translated_482_residues MASMRSNFLLIFVWLLIGFYSHAQLKQVLTEVEPLSISSESGKGSIYLKVNKSSNYILTFDISLGSDFVYMVYDVLNKKY ITDKIRKRDVKLKLHKDILYAVIYVTSENANINFVLADLDLSIISDDALRAKISNIKKQDKTFLLRDLPSFKLGAKLKKY ILRTYSRNIYLAYQMENSDNIKVSSFIENIGWFDISTAVNDNITDIACFDFAVNSKGELYVVFTTKSTDDFSSELIVKKF NSRKWIDISPKFRTNIGFLVNISIDKRDNLYVAYLKKVGSEYKVNFVANRGYSNIWNNVMDSYMSKGDAYVDVSSIGIIS EPFLGIFYNYKVNDYVNSEFIVDRGKTWANANIQSANMADSVKLLSNFKSGQVVLSYITKDRPIVSVFSLQDDKWKNISP NIRIKGITSDILSYRNDLLLTFEDGDDIRLIYFDEDNWYFLNESEIFQKSACKPQFAKYQDEGFILSYLSLDFKVLSFKL IS >Mature_481_residues ASMRSNFLLIFVWLLIGFYSHAQLKQVLTEVEPLSISSESGKGSIYLKVNKSSNYILTFDISLGSDFVYMVYDVLNKKYI TDKIRKRDVKLKLHKDILYAVIYVTSENANINFVLADLDLSIISDDALRAKISNIKKQDKTFLLRDLPSFKLGAKLKKYI LRTYSRNIYLAYQMENSDNIKVSSFIENIGWFDISTAVNDNITDIACFDFAVNSKGELYVVFTTKSTDDFSSELIVKKFN SRKWIDISPKFRTNIGFLVNISIDKRDNLYVAYLKKVGSEYKVNFVANRGYSNIWNNVMDSYMSKGDAYVDVSSIGIISE PFLGIFYNYKVNDYVNSEFIVDRGKTWANANIQSANMADSVKLLSNFKSGQVVLSYITKDRPIVSVFSLQDDKWKNISPN IRIKGITSDILSYRNDLLLTFEDGDDIRLIYFDEDNWYFLNESEIFQKSACKPQFAKYQDEGFILSYLSLDFKVLSFKLI S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55489; Mature: 55358
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMRSNFLLIFVWLLIGFYSHAQLKQVLTEVEPLSISSESGKGSIYLKVNKSSNYILTF CCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCEEEEE DISLGSDFVYMVYDVLNKKYITDKIRKRDVKLKLHKDILYAVIYVTSENANINFVLADLD EEECCCCHHHHHHHHHCCHHHHHHHHHCCEEEEEEEEEEEEEEEEEECCCCEEEEEEECE LSIISDDALRAKISNIKKQDKTFLLRDLPSFKLGAKLKKYILRTYSRNIYLAYQMENSDN EEEECCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC IKVSSFIENIGWFDISTAVNDNITDIACFDFAVNSKGELYVVFTTKSTDDFSSELIVKKF EEHHHHHHHCCCEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHC NSRKWIDISPKFRTNIGFLVNISIDKRDNLYVAYLKKVGSEYKVNFVANRGYSNIWNNVM CCCEEEEECCCCCCCCEEEEEEEECCCCCEEEEEHHHCCCCEEEEEEEECCCHHHHHHHH DSYMSKGDAYVDVSSIGIISEPFLGIFYNYKVNDYVNSEFIVDRGKTWANANIQSANMAD HHHHHCCCCEEEEECCCEECCCCEEEEEEEEECCCCCCEEEEECCCEEECCCCCCCCCHH SVKLLSNFKSGQVVLSYITKDRPIVSVFSLQDDKWKNISPNIRIKGITSDILSYRNDLLL HHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEHHHHHHCCCCEEE TFEDGDDIRLIYFDEDNWYFLNESEIFQKSACKPQFAKYQDEGFILSYLSLDFKVLSFKL EEECCCCEEEEEEECCCEEEECHHHHHHHHCCCCHHHCCCCCCEEEEEEECCEEEEEEEE IS CC >Mature Secondary Structure ASMRSNFLLIFVWLLIGFYSHAQLKQVLTEVEPLSISSESGKGSIYLKVNKSSNYILTF CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEECCCCCEEEEEEEECCCCEEEEE DISLGSDFVYMVYDVLNKKYITDKIRKRDVKLKLHKDILYAVIYVTSENANINFVLADLD EEECCCCHHHHHHHHHCCHHHHHHHHHCCEEEEEEEEEEEEEEEEEECCCCEEEEEEECE LSIISDDALRAKISNIKKQDKTFLLRDLPSFKLGAKLKKYILRTYSRNIYLAYQMENSDN EEEECCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC IKVSSFIENIGWFDISTAVNDNITDIACFDFAVNSKGELYVVFTTKSTDDFSSELIVKKF EEHHHHHHHCCCEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHC NSRKWIDISPKFRTNIGFLVNISIDKRDNLYVAYLKKVGSEYKVNFVANRGYSNIWNNVM CCCEEEEECCCCCCCCEEEEEEEECCCCCEEEEEHHHCCCCEEEEEEEECCCHHHHHHHH DSYMSKGDAYVDVSSIGIISEPFLGIFYNYKVNDYVNSEFIVDRGKTWANANIQSANMAD HHHHHCCCCEEEEECCCEECCCCEEEEEEEEECCCCCCEEEEECCCEEECCCCCCCCCHH SVKLLSNFKSGQVVLSYITKDRPIVSVFSLQDDKWKNISPNIRIKGITSDILSYRNDLLL HHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEHHHHHHCCCCEEE TFEDGDDIRLIYFDEDNWYFLNESEIFQKSACKPQFAKYQDEGFILSYLSLDFKVLSFKL EEECCCCEEEEEEECCCEEEECHHHHHHHHCCCCHHHCCCCCCEEEEEEECCEEEEEEEE IS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA