Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is yrrL [H]
Identifier: 187918565
GI number: 187918565
Start: 752617
End: 753651
Strand: Direct
Name: yrrL [H]
Synonym: BH0709
Alternate gene names: 187918565
Gene position: 752617-753651 (Clockwise)
Preceding gene: 187918564
Following gene: 187918566
Centisome position: 81.6
GC content: 28.99
Gene sequence:
>1035_bases ATGGCAATAAAAAAAATTTTTATTTTCCTTTTTGTGTTATTTATTGTTTTCTCTGTTTTAGTATTTTTTTTGTATTTTTT AAATTCTTCTCCTTTAAAGTCTGACTTGGTATATGAGTTTGAAGTTCAAAAGGGATGGGGGGTTAAAAAAATTGCTTTGG AACTTAATAAGAAAGGACTCATTAGATCCCACAAGTTATTGATAGCTATTTCTTATCTTTTTGGTAGTGATAAAAGTTTT AGGGAAGGCAAATATTTAATCAATGGTAATTGTTCAACTTTTGATGTGTATAGAGAATTTTTGAAGGGTAGACCTATACT TCCTATTAATATTACCATACCCGAAGGGTATACTGGCCGAAGAATAGCTTTAAAGCTTAATGAATCAGGAATTATTAGTG ATGTGCAGAGTTTTGTTGATTTGATAAATGACGTCAAATTTATTGGTGAACTTGGACTTAGTTATGATTCTCTTGAAGGA TTTTTATTCCCAGATACTTATAAATTTTATAAGGGTATGGATATGAAGGAAATAATTCGAATTTTTGTTGGTAATTTTTT TAGCAAACTTGGTTTTATTGGCATAGATCATAAATCTTATTCTAGTGAAGAACTTTATAATAAAGTGATCATTGCTTCTA TTGTTGAACGTGAATATCGAGTTAAGAGCGAGGCACCAATAATGGCATCTGTTTTTTATAATAGGATAAAGTCTAATATG GCATTACAATCTTGCGCTACAATTGAGTATATTATTACTGAAGAACTAAGGAAGCCACATCCTTCAAGAATTTATTTTTC AGATTTAGAGATTAATTCTGCATATAATACTTATATTAATAAAGGTTATCCTCCAGGTCCAATTTCTAACGCTGGGATTG TATCTTTAAAGGCGGCCTTTTTTCCAAATAACACAAATTATTTGTTTTTTGTTATAAAAGATCCTAAGATTGGTATTCAT AAATTTTCTTCAGCTTATAATGACCATCTCTTAGCTGCAAATAGTTATATTCGTAATTTTATTACTAAGGATTAA
Upstream 100 bases:
>100_bases TTGTAAGTTGTGTTTTCAGGGCTAATATGCTTTTTGTGTCTTATTTGATTAAAGGCATGGAAGTGTGGTTTTCTTTTTTT AAAAGAGATTTTAAGTTCTT
Downstream 100 bases:
>100_bases AGAAGTATGGAATATGCTAAGGTTATAGATTTAATTAAACAAAGAGTAGATATTGTAGGTTTAATAGGCGAGCGTGTTAG ATTGGTTAAAGCAGGAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MAIKKIFIFLFVLFIVFSVLVFFLYFLNSSPLKSDLVYEFEVQKGWGVKKIALELNKKGLIRSHKLLIAISYLFGSDKSF REGKYLINGNCSTFDVYREFLKGRPILPINITIPEGYTGRRIALKLNESGIISDVQSFVDLINDVKFIGELGLSYDSLEG FLFPDTYKFYKGMDMKEIIRIFVGNFFSKLGFIGIDHKSYSSEELYNKVIIASIVEREYRVKSEAPIMASVFYNRIKSNM ALQSCATIEYIITEELRKPHPSRIYFSDLEINSAYNTYINKGYPPGPISNAGIVSLKAAFFPNNTNYLFFVIKDPKIGIH KFSSAYNDHLLAANSYIRNFITKD
Sequences:
>Translated_344_residues MAIKKIFIFLFVLFIVFSVLVFFLYFLNSSPLKSDLVYEFEVQKGWGVKKIALELNKKGLIRSHKLLIAISYLFGSDKSF REGKYLINGNCSTFDVYREFLKGRPILPINITIPEGYTGRRIALKLNESGIISDVQSFVDLINDVKFIGELGLSYDSLEG FLFPDTYKFYKGMDMKEIIRIFVGNFFSKLGFIGIDHKSYSSEELYNKVIIASIVEREYRVKSEAPIMASVFYNRIKSNM ALQSCATIEYIITEELRKPHPSRIYFSDLEINSAYNTYINKGYPPGPISNAGIVSLKAAFFPNNTNYLFFVIKDPKIGIH KFSSAYNDHLLAANSYIRNFITKD >Mature_343_residues AIKKIFIFLFVLFIVFSVLVFFLYFLNSSPLKSDLVYEFEVQKGWGVKKIALELNKKGLIRSHKLLIAISYLFGSDKSFR EGKYLINGNCSTFDVYREFLKGRPILPINITIPEGYTGRRIALKLNESGIISDVQSFVDLINDVKFIGELGLSYDSLEGF LFPDTYKFYKGMDMKEIIRIFVGNFFSKLGFIGIDHKSYSSEELYNKVIIASIVEREYRVKSEAPIMASVFYNRIKSNMA LQSCATIEYIITEELRKPHPSRIYFSDLEINSAYNTYINKGYPPGPISNAGIVSLKAAFFPNNTNYLFFVIKDPKIGIHK FSSAYNDHLLAANSYIRNFITKD
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=189, Percent_Identity=32.2751322751323, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 39439; Mature: 39308
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKKIFIFLFVLFIVFSVLVFFLYFLNSSPLKSDLVYEFEVQKGWGVKKIALELNKKGL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCC IRSHKLLIAISYLFGSDKSFREGKYLINGNCSTFDVYREFLKGRPILPINITIPEGYTGR HHHHHHEEEEEEHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCC RIALKLNESGIISDVQSFVDLINDVKFIGELGLSYDSLEGFLFPDTYKFYKGMDMKEIIR EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHCCCCHHHHHH IFVGNFFSKLGFIGIDHKSYSSEELYNKVIIASIVEREYRVKSEAPIMASVFYNRIKSNM HHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ALQSCATIEYIITEELRKPHPSRIYFSDLEINSAYNTYINKGYPPGPISNAGIVSLKAAF HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHCCCCCCCCCCCCCEEEEEEEE FPNNTNYLFFVIKDPKIGIHKFSSAYNDHLLAANSYIRNFITKD CCCCCCEEEEEEECCCCCHHHHHHHHCCCEEHHHHHHHHHHCCC >Mature Secondary Structure AIKKIFIFLFVLFIVFSVLVFFLYFLNSSPLKSDLVYEFEVQKGWGVKKIALELNKKGL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCC IRSHKLLIAISYLFGSDKSFREGKYLINGNCSTFDVYREFLKGRPILPINITIPEGYTGR HHHHHHEEEEEEHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCC RIALKLNESGIISDVQSFVDLINDVKFIGELGLSYDSLEGFLFPDTYKFYKGMDMKEIIR EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHCCCCHHHHHH IFVGNFFSKLGFIGIDHKSYSSEELYNKVIIASIVEREYRVKSEAPIMASVFYNRIKSNM HHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ALQSCATIEYIITEELRKPHPSRIYFSDLEINSAYNTYINKGYPPGPISNAGIVSLKAAF HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHCCCCCCCCCCCCCEEEEEEEE FPNNTNYLFFVIKDPKIGIHKFSSAYNDHLLAANSYIRNFITKD CCCCCCEEEEEEECCCCCHHHHHHHHCCCEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]