Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is gpmA [H]
Identifier: 187918514
GI number: 187918514
Start: 703816
End: 704562
Strand: Direct
Name: gpmA [H]
Synonym: BH0658
Alternate gene names: 187918514
Gene position: 703816-704562 (Clockwise)
Preceding gene: 187918512
Following gene: 187918517
Centisome position: 76.31
GC content: 34.14
Gene sequence:
>747_bases ATGTATAAATTAGTTTTAGTGAGGCATGGTGAGAGTGAATGGAATAGAGAAAATCTTTTTACAGGCTGGACTGATGTTAA GCTTTCTGAAAAGGGTATTTCTGAAGCTTTAGAGGGTGGTAGAGTTCTTAAACAAAATGGATATTCTTTTGATATTGCTT TTAGTTCAATGTTAGTCAGAGCTAATGATACTTTAAATATTATTTTGCGTGAGTTGGGACAATCTTATATTGATGTAGAG AAATCCTGGCGACTCAATGAGAGGCATTATGGAGCTTTGCAAGGGTTAAATAAGGCTGAGACAGCTGAGAAGTATGGAGA AGATCAGGTTTTAATGTGGAGACGTAGTTATGATATTCCTCCTATGCCTTTAGAAGAGTCTGATAAGCGTCATCCAATTC ATGACTTAAGATATAAAGGAATTCCTAAAAGTGAGCTTCCCTCAACAGAATGTTTAAAGGATACTGTTGCAAGAGTTATA CCGTATTGGACAGATAAAATTGCTAAAGCTATTATTGAGGGAAAAAGAGTTATTATTGCTGCTCATGGTAATTCCTTAAG AGCTCTTGTTAAATATCTTGATAATATGAGTGATGATGATATTTTAAAGCTCAATATTCCGACTGGTATTCCTTTAGTTT ATGAACTTGATCAAGATTTAAGACCTATTAAACACTATTACTTAGGTGATGAGGATAAGATTAAGGCGGCTATGGAATCT GTTGCTAATCAAGGAAAGAAAAAATAA
Upstream 100 bases:
>100_bases CTTGGGGGGGATTCTTGAGTATTAACATTAATTAGATTTTGTGTTAATTTAATTGATAAAATGTTATTAAAGTAATAAAA AACATTTCTTAGGAGATTTT
Downstream 100 bases:
>100_bases AGAGGCCATTAAGACTATTAGGAAGAGATCATTTAAGTTAATGCTCTCTTCCTGTTATATGTTAAATAATTTAATATTGG AGCTAAATATAGTGTTTAAC
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MYKLVLVRHGESEWNRENLFTGWTDVKLSEKGISEALEGGRVLKQNGYSFDIAFSSMLVRANDTLNIILRELGQSYIDVE KSWRLNERHYGALQGLNKAETAEKYGEDQVLMWRRSYDIPPMPLEESDKRHPIHDLRYKGIPKSELPSTECLKDTVARVI PYWTDKIAKAIIEGKRVIIAAHGNSLRALVKYLDNMSDDDILKLNIPTGIPLVYELDQDLRPIKHYYLGDEDKIKAAMES VANQGKKK
Sequences:
>Translated_248_residues MYKLVLVRHGESEWNRENLFTGWTDVKLSEKGISEALEGGRVLKQNGYSFDIAFSSMLVRANDTLNIILRELGQSYIDVE KSWRLNERHYGALQGLNKAETAEKYGEDQVLMWRRSYDIPPMPLEESDKRHPIHDLRYKGIPKSELPSTECLKDTVARVI PYWTDKIAKAIIEGKRVIIAAHGNSLRALVKYLDNMSDDDILKLNIPTGIPLVYELDQDLRPIKHYYLGDEDKIKAAMES VANQGKKK >Mature_248_residues MYKLVLVRHGESEWNRENLFTGWTDVKLSEKGISEALEGGRVLKQNGYSFDIAFSSMLVRANDTLNIILRELGQSYIDVE KSWRLNERHYGALQGLNKAETAEKYGEDQVLMWRRSYDIPPMPLEESDKRHPIHDLRYKGIPKSELPSTECLKDTVARVI PYWTDKIAKAIIEGKRVIIAAHGNSLRALVKYLDNMSDDDILKLNIPTGIPLVYELDQDLRPIKHYYLGDEDKIKAAMES VANQGKKK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=253, Percent_Identity=54.1501976284585, Blast_Score=284, Evalue=6e-77, Organism=Homo sapiens, GI4505753, Length=250, Percent_Identity=55.2, Blast_Score=271, Evalue=3e-73, Organism=Homo sapiens, GI4502445, Length=255, Percent_Identity=48.6274509803922, Blast_Score=261, Evalue=6e-70, Organism=Homo sapiens, GI40353764, Length=255, Percent_Identity=48.6274509803922, Blast_Score=261, Evalue=6e-70, Organism=Homo sapiens, GI71274132, Length=250, Percent_Identity=52, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=53.7037037037037, Blast_Score=165, Evalue=4e-41, Organism=Escherichia coli, GI1786970, Length=246, Percent_Identity=63.0081300813008, Blast_Score=317, Evalue=7e-88, Organism=Saccharomyces cerevisiae, GI6322697, Length=247, Percent_Identity=54.251012145749, Blast_Score=258, Evalue=8e-70, Organism=Saccharomyces cerevisiae, GI6324516, Length=296, Percent_Identity=33.7837837837838, Blast_Score=157, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6320183, Length=296, Percent_Identity=32.4324324324324, Blast_Score=145, Evalue=7e-36, Organism=Drosophila melanogaster, GI24646216, Length=251, Percent_Identity=53.7848605577689, Blast_Score=279, Evalue=1e-75, Organism=Drosophila melanogaster, GI85725270, Length=251, Percent_Identity=55.3784860557769, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI85725272, Length=251, Percent_Identity=55.3784860557769, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI24650981, Length=251, Percent_Identity=55.3784860557769, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI28571815, Length=252, Percent_Identity=39.2857142857143, Blast_Score=185, Evalue=2e-47, Organism=Drosophila melanogaster, GI28571817, Length=252, Percent_Identity=39.2857142857143, Blast_Score=185, Evalue=3e-47, Organism=Drosophila melanogaster, GI24648979, Length=252, Percent_Identity=39.2857142857143, Blast_Score=185, Evalue=3e-47,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 28462; Mature: 28462
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKLVLVRHGESEWNRENLFTGWTDVKLSEKGISEALEGGRVLKQNGYSFDIAFSSMLVR CEEEEEEECCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCEEEECCCCEEEEEHHHHHHC ANDTLNIILRELGQSYIDVEKSWRLNERHYGALQGLNKAETAEKYGEDQVLMWRRSYDIP CCCHHHHHHHHHCHHHHCHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCC PMPLEESDKRHPIHDLRYKGIPKSELPSTECLKDTVARVIPYWTDKIAKAIIEGKRVIIA CCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEE AHGNSLRALVKYLDNMSDDDILKLNIPTGIPLVYELDQDLRPIKHYYLGDEDKIKAAMES ECCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHH VANQGKKK HHHCCCCC >Mature Secondary Structure MYKLVLVRHGESEWNRENLFTGWTDVKLSEKGISEALEGGRVLKQNGYSFDIAFSSMLVR CEEEEEEECCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCEEEECCCCEEEEEHHHHHHC ANDTLNIILRELGQSYIDVEKSWRLNERHYGALQGLNKAETAEKYGEDQVLMWRRSYDIP CCCHHHHHHHHHCHHHHCHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCC PMPLEESDKRHPIHDLRYKGIPKSELPSTECLKDTVARVIPYWTDKIAKAIIEGKRVIIA CCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEE AHGNSLRALVKYLDNMSDDDILKLNIPTGIPLVYELDQDLRPIKHYYLGDEDKIKAAMES ECCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHH VANQGKKK HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA