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The map label for this gene is yibD [H]

Identifier: 187918436

GI number: 187918436

Start: 595685

End: 596749

Strand: Direct

Name: yibD [H]

Synonym: BH0572

Alternate gene names: 187918436

Gene position: 595685-596749 (Clockwise)

Preceding gene: 187918434

Following gene: 187918437

Centisome position: 64.59

GC content: 27.61

Gene sequence:

>1065_bases
ATGTATAAGTACAAGGTCTCTGTGATTATTTGTTTTTTTAATTCTGATAGTACCCTTGAAGTGATTATAAAAAATGCTGT
TAATCAAACATTAAGAGATAAAGAAATTATATTGGTGAATGATGGTTCTTATGATAATAGCTTGAAGATAGCTCAGAAAT
ATGCTGATAAGTATGATTTTGTTAAAATTATTAATCAGAAAAATATGGGAATAGCTGCCTCTAGGAATAATGGACTTGAA
AAGTCTGAAGGAGAATATATAGTTTATTGGGATAGTGATGATTCTGTTGAGAATACTATGCTTGAGGTATTATATAATAG
GGCAAAGGCCGATAATTCAGATATTGTTTGTTCTCAGTTTTATATTTACTTTCTTGCAAAAAATATTAAAAGGAGATCTG
CGCTTCCTTTTCCAAATTATCCAATAACTGGAGAAGAAGCTTTTAGGAATTTATTATTAACTGTTTTTGCTAGCTTTTGT
AAGAGAAATTTTGTTGTGGGTACATTGTGGGATAAAATGATTAGAAGAGATTTAATTATAAAGAATAATATTAGAGTAAA
TGATGTAATATTAGAAGACATAGTTTTCATGATTCATGCTTTTTTGAAGGCAGATAAGGTTTCTTTTGTAAATAATTATT
TTTACACTAACTTCCAGCGGATGGGGAGGGCCAGTTCATCAATTAGCGTAATAAGTAAGATTAATTCATCCCTTAAGGTT
GTAGAAAATTTTCTAAAGGAAGAAGGACTTTTTGAGAAATATTTTGAATATTATAAGAAGTTTTATTTGCAGCTTTATTA
TTATATTTCTTTTAAGCAGATTTATATTATAAATTGGCACATTAAGGATCGACTTATTTATAAGGCACATAAAGAAAAAC
TTATTTCTGTTCTTAATGAAGTTCAAAATTCTAAGGAGTTCCAAAGTTATTATGCAAGTCTTAAGGGTTCCAGGTTTAGT
GAGCTTCAAATTTTGCCAAAAATTATGTTGAAAATTTGGAATTTTAGTTCGGGACTTTATGTTAATTTTTCTATATTTAT
TTATAGATCTTTTTTAAAAAATTAG

Upstream 100 bases:

>100_bases
GTTTCCTTATATCTTATAATTAATATAATTAAGAATATTTAGTATATTCAGTTATTAATACAGGCTTTTTGTTGGGTTGG
TATTTATTTAGGAGGATTTT

Downstream 100 bases:

>100_bases
TGTTTTATTCTTGTATTTATCATAGACTCTTTTTACAATTAACATAAAGGAGAATTTTGATTGAAAATAGAATTTAGAGA
TGTTTCGTTTTCTTATCGTA

Product: SS-1,4-galactosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MYKYKVSVIICFFNSDSTLEVIIKNAVNQTLRDKEIILVNDGSYDNSLKIAQKYADKYDFVKIINQKNMGIAASRNNGLE
KSEGEYIVYWDSDDSVENTMLEVLYNRAKADNSDIVCSQFYIYFLAKNIKRRSALPFPNYPITGEEAFRNLLLTVFASFC
KRNFVVGTLWDKMIRRDLIIKNNIRVNDVILEDIVFMIHAFLKADKVSFVNNYFYTNFQRMGRASSSISVISKINSSLKV
VENFLKEEGLFEKYFEYYKKFYLQLYYYISFKQIYIINWHIKDRLIYKAHKEKLISVLNEVQNSKEFQSYYASLKGSRFS
ELQILPKIMLKIWNFSSGLYVNFSIFIYRSFLKN

Sequences:

>Translated_354_residues
MYKYKVSVIICFFNSDSTLEVIIKNAVNQTLRDKEIILVNDGSYDNSLKIAQKYADKYDFVKIINQKNMGIAASRNNGLE
KSEGEYIVYWDSDDSVENTMLEVLYNRAKADNSDIVCSQFYIYFLAKNIKRRSALPFPNYPITGEEAFRNLLLTVFASFC
KRNFVVGTLWDKMIRRDLIIKNNIRVNDVILEDIVFMIHAFLKADKVSFVNNYFYTNFQRMGRASSSISVISKINSSLKV
VENFLKEEGLFEKYFEYYKKFYLQLYYYISFKQIYIINWHIKDRLIYKAHKEKLISVLNEVQNSKEFQSYYASLKGSRFS
ELQILPKIMLKIWNFSSGLYVNFSIFIYRSFLKN
>Mature_354_residues
MYKYKVSVIICFFNSDSTLEVIIKNAVNQTLRDKEIILVNDGSYDNSLKIAQKYADKYDFVKIINQKNMGIAASRNNGLE
KSEGEYIVYWDSDDSVENTMLEVLYNRAKADNSDIVCSQFYIYFLAKNIKRRSALPFPNYPITGEEAFRNLLLTVFASFC
KRNFVVGTLWDKMIRRDLIIKNNIRVNDVILEDIVFMIHAFLKADKVSFVNNYFYTNFQRMGRASSSISVISKINSSLKV
VENFLKEEGLFEKYFEYYKKFYLQLYYYISFKQIYIINWHIKDRLIYKAHKEKLISVLNEVQNSKEFQSYYASLKGSRFS
ELQILPKIMLKIWNFSSGLYVNFSIFIYRSFLKN

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=282, Percent_Identity=27.3049645390071, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41838; Mature: 41838

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKYKVSVIICFFNSDSTLEVIIKNAVNQTLRDKEIILVNDGSYDNSLKIAQKYADKYDF
CCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
VKIINQKNMGIAASRNNGLEKSEGEYIVYWDSDDSVENTMLEVLYNRAKADNSDIVCSQF
HHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
YIYFLAKNIKRRSALPFPNYPITGEEAFRNLLLTVFASFCKRNFVVGTLWDKMIRRDLII
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHEE
KNNIRVNDVILEDIVFMIHAFLKADKVSFVNNYFYTNFQRMGRASSSISVISKINSSLKV
ECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VENFLKEEGLFEKYFEYYKKFYLQLYYYISFKQIYIINWHIKDRLIYKAHKEKLISVLNE
HHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHH
VQNSKEFQSYYASLKGSRFSELQILPKIMLKIWNFSSGLYVNFSIFIYRSFLKN
HHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCC
>Mature Secondary Structure
MYKYKVSVIICFFNSDSTLEVIIKNAVNQTLRDKEIILVNDGSYDNSLKIAQKYADKYDF
CCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
VKIINQKNMGIAASRNNGLEKSEGEYIVYWDSDDSVENTMLEVLYNRAKADNSDIVCSQF
HHHHCCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
YIYFLAKNIKRRSALPFPNYPITGEEAFRNLLLTVFASFCKRNFVVGTLWDKMIRRDLII
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHEE
KNNIRVNDVILEDIVFMIHAFLKADKVSFVNNYFYTNFQRMGRASSSISVISKINSSLKV
ECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VENFLKEEGLFEKYFEYYKKFYLQLYYYISFKQIYIINWHIKDRLIYKAHKEKLISVLNE
HHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHH
VQNSKEFQSYYASLKGSRFSELQILPKIMLKIWNFSSGLYVNFSIFIYRSFLKN
HHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]