Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is cheW [H]
Identifier: 187918428
GI number: 187918428
Start: 586730
End: 587266
Strand: Direct
Name: cheW [H]
Synonym: BH0565
Alternate gene names: 187918428
Gene position: 586730-587266 (Clockwise)
Preceding gene: 187918424
Following gene: 187918429
Centisome position: 63.62
GC content: 27.93
Gene sequence:
>537_bases ATGGAATTAGAAACCGATGTACAGGGTACATTAAGTCAGTATCTTTTGTTTAGTTTAGATGAACTTTATGCGATTGAGAT TAAATATGTTGTTGAGGTATTAGAGTATACTAAAATCTCAAAAATACCAAGAACTCCTGATTATATGGCAGGAATAATCA ATAATAGAGGCAAAATAGTTCCAATAATTGATATTAGAAAGCAATTTGGTATGCAAGAGCGTAAAGTTAGTGATGATGGG ATTAAGAAAAAAGACGTTGATATTTCAAATATTATTATATTAACTTTGGTATATGAAGGTGATGAATTAAATCTTGGAAT TTTGGTAGATTATGTTAATGAGGTTCTTGAGTTAAATTCATCTGATATTGATGATGCTCCAAAAATTGGTACGGGATTCA ATTCAAGATTTATATCTGGAATTGGTAAGCGTAATAATAAATTTATTATTATTCTTGATATAGAAAATCTATTTGATATT AAAGAACTCTCCAAATTTAAAAATACTACAGTATCTGATCAAGATGATGAGCAATAG
Upstream 100 bases:
>100_bases TTTATAATTGATACATTAGAGTATGAGTGATATGTGAAATTTGAATAAAATTTATGAGTGTTCTATTTTATATTATTAGT TATATCATTAAGAGGCATTT
Downstream 100 bases:
>100_bases GAGTTTTACGTGTTATGATTTATAACCCAGAAGGAGAACTTGTAGTAAACAGCATTTTTAAGGTTAAAGAAGATCTTTTA AATATTCTTAAGGATATGAA
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MELETDVQGTLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPDYMAGIINNRGKIVPIIDIRKQFGMQERKVSDDG IKKKDVDISNIIILTLVYEGDELNLGILVDYVNEVLELNSSDIDDAPKIGTGFNSRFISGIGKRNNKFIIILDIENLFDI KELSKFKNTTVSDQDDEQ
Sequences:
>Translated_178_residues MELETDVQGTLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPDYMAGIINNRGKIVPIIDIRKQFGMQERKVSDDG IKKKDVDISNIIILTLVYEGDELNLGILVDYVNEVLELNSSDIDDAPKIGTGFNSRFISGIGKRNNKFIIILDIENLFDI KELSKFKNTTVSDQDDEQ >Mature_178_residues MELETDVQGTLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPDYMAGIINNRGKIVPIIDIRKQFGMQERKVSDDG IKKKDVDISNIIILTLVYEGDELNLGILVDYVNEVLELNSSDIDDAPKIGTGFNSRFISGIGKRNNKFIIILDIENLFDI KELSKFKNTTVSDQDDEQ
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=153, Percent_Identity=30.718954248366, Blast_Score=84, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 20285; Mature: 20285
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELETDVQGTLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPDYMAGIINNRGKIV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEE PIIDIRKQFGMQERKVSDDGIKKKDVDISNIIILTLVYEGDELNLGILVDYVNEVLELNS EEEECHHHCCCCHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC SDIDDAPKIGTGFNSRFISGIGKRNNKFIIILDIENLFDIKELSKFKNTTVSDQDDEQ CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MELETDVQGTLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPDYMAGIINNRGKIV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEE PIIDIRKQFGMQERKVSDDGIKKKDVDISNIIILTLVYEGDELNLGILVDYVNEVLELNS EEEECHHHCCCCHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC SDIDDAPKIGTGFNSRFISGIGKRNNKFIIILDIENLFDIKELSKFKNTTVSDQDDEQ CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]