Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918417
Identifier: 187918417
GI number: 187918417
Start: 574854
End: 576725
Strand: Direct
Name: 187918417
Synonym: BH0554
Alternate gene names: NA
Gene position: 574854-576725 (Clockwise)
Preceding gene: 187918415
Following gene: 187918418
Centisome position: 62.33
GC content: 27.24
Gene sequence:
>1872_bases TTGTTTATGAAGTTAGAGAATATGGATGAAGTTTGGGCTTTGCCAGTTTGTTGCAATATCAACAATTCTATTATTGATGA TTTTAGACTTTCAGATAAATATAAAGATCAGGTTTTTTATATAAGTTATAAAGATGATATTATCTTAAAGTTTATTGATA TTGTTGATTCTAATGAATTTGATTTAAAACTTTTTGATAATAAAATAGATTTTGAAGGACAAATTCCTGTAGTTTTATAT TCTGAGAGCTTAGATTCTTTATTAGGAGCAGAAGAAAGCATTGATTTTGAATTAAAAGACATTGAGCAGAATGATGTTTA TTTTGATTCAAGAGTGAAAGAATCAGGTGAATTTAAAATTCATAATTCTTATTATGAGTTTTCAGATTATTTAAATTATT GCAGTGATATTCTTTTAGTTAGAGTGTGCTTTAAAGGCGATAGTTTAATCATTGATGCAGACCTTGATAATATTGCACTT GTAAAGCAAATTATTAGTAATAATTTTTGTATTGCTTTCGATAAGATTATTATTAATCCTATTAATAATGATTGTTTGAA TGGTTTGTTTCCAGTTTCTTTTAATGCTGTCTTACAAGGTATAATAATTGCTAAGAAACTTGGGCAAAAAGTTAATGTTA TTTATTATAAAAGACATTTTTTAATGGCACAATCCTTAAGTTTAAAGTTTTCAGCTGTTAATTATTTATCAGTAGAAAAT AGGCTTGCTAAGATTATGTTAGATCTTGAAATCGACAGACCATTAAACTTTTTATATAAATTTTATTTTGATTGCCTCAG GCATATTTTTAGTAATTTATTTTTTGATGTGTGTGTACATATTAATTTCATATCGACTAAGAGTAATGCTATATTTTTTT ATGACAATTATTTCTTCTTTGAGAGCTCTGTTTATAATTTTATTTATTCAAACTTTTATAATCTTGCAGTCAGTTTGTCA ATTGAACCTCTTAGTTATTTACTCAGCTATGTTAAGGGTGAATATAATATTTTTTTAAAGCTTTTTAAGGAGATGGATTT GAAAAATTCTATCATGCGCAAGTCATCTTCTATAAGCTTAAATAATGAATATAATATTTTTGATGTGAGAAGAAAAGGTA TAGGATTTGCCTTTTTAAATCTAGACCCTAATCTAGATTCTGCTTTCTTAAGTGGCAATCAGACTGTTTCTATGAGTTTG CATAAGGATAAATTAGACGTATCTATTCCTTATAGAGTGATAGATGTCAACTTAATAAACTATTTAAGGAATACTTTAGC TAGGACTTTTAGCTTATCTTATGATAATGTTAATTTTATTGTTAGTGATGCCTTTGGAGAGGATGTTGAACCTTATAGTG CATTGATCAAAGAATCTTATCTCATTGAAAGAGAGGTTTTAGCTATGAAGGATGAGCTTGTCGTGATGATTGGTGAGGAT TTTAAAGGAGAATATCCTGTTGTAGTTGGTCAAAACTTTGTTGTAGATATAGGCAAGAGGTTTAATGTTGCTTGTTCTCT TGAGATTGATGTAGGAATAAGTTCTTTTAATATTATATTTAGTAATGTGAATTTTTTTGTTGAAAATGGTAAGTTTGATA AACTTAGAATAAATAATAAACGTGCATTTTCAATTTTTAGCTTGGCAGTTGACTATGTTTTTGGAAATATTACTTATGAT ATTGTTGATTCCGTGGAGCTTGAGTTTATTGAAGATGGTGAATTTGTTTTTTCTTTTAGAGTATTATTTGTTGCATCTGT TTCTGCAATTAGAACAGCTTTAATTCAGGCTTTTGACTTTAACATATGTAAAACCCCTATTGATCTTAAGGATATTCTAA ATAGTTGGAGCGTACGAATTGATACTAATTAG
Upstream 100 bases:
>100_bases CATCATGTTTTGATTTGCAATAGTAATTTTGTTGGTATTATGACATAATTATAGAAATAGAAGGTAAATTATAAATTTTT GACTTCTTATTTTACTTAAG
Downstream 100 bases:
>100_bases CTTTAATTTGAATGGAGAGAGTCTTTCAAAAAGTATTGAACTTCCTTTAAGTACCAAAGAGCTTTTGATAAGTATTTTTT ATTCAGGTGATCGAAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MFMKLENMDEVWALPVCCNINNSIIDDFRLSDKYKDQVFYISYKDDIILKFIDIVDSNEFDLKLFDNKIDFEGQIPVVLY SESLDSLLGAEESIDFELKDIEQNDVYFDSRVKESGEFKIHNSYYEFSDYLNYCSDILLVRVCFKGDSLIIDADLDNIAL VKQIISNNFCIAFDKIIINPINNDCLNGLFPVSFNAVLQGIIIAKKLGQKVNVIYYKRHFLMAQSLSLKFSAVNYLSVEN RLAKIMLDLEIDRPLNFLYKFYFDCLRHIFSNLFFDVCVHINFISTKSNAIFFYDNYFFFESSVYNFIYSNFYNLAVSLS IEPLSYLLSYVKGEYNIFLKLFKEMDLKNSIMRKSSSISLNNEYNIFDVRRKGIGFAFLNLDPNLDSAFLSGNQTVSMSL HKDKLDVSIPYRVIDVNLINYLRNTLARTFSLSYDNVNFIVSDAFGEDVEPYSALIKESYLIEREVLAMKDELVVMIGED FKGEYPVVVGQNFVVDIGKRFNVACSLEIDVGISSFNIIFSNVNFFVENGKFDKLRINNKRAFSIFSLAVDYVFGNITYD IVDSVELEFIEDGEFVFSFRVLFVASVSAIRTALIQAFDFNICKTPIDLKDILNSWSVRIDTN
Sequences:
>Translated_623_residues MFMKLENMDEVWALPVCCNINNSIIDDFRLSDKYKDQVFYISYKDDIILKFIDIVDSNEFDLKLFDNKIDFEGQIPVVLY SESLDSLLGAEESIDFELKDIEQNDVYFDSRVKESGEFKIHNSYYEFSDYLNYCSDILLVRVCFKGDSLIIDADLDNIAL VKQIISNNFCIAFDKIIINPINNDCLNGLFPVSFNAVLQGIIIAKKLGQKVNVIYYKRHFLMAQSLSLKFSAVNYLSVEN RLAKIMLDLEIDRPLNFLYKFYFDCLRHIFSNLFFDVCVHINFISTKSNAIFFYDNYFFFESSVYNFIYSNFYNLAVSLS IEPLSYLLSYVKGEYNIFLKLFKEMDLKNSIMRKSSSISLNNEYNIFDVRRKGIGFAFLNLDPNLDSAFLSGNQTVSMSL HKDKLDVSIPYRVIDVNLINYLRNTLARTFSLSYDNVNFIVSDAFGEDVEPYSALIKESYLIEREVLAMKDELVVMIGED FKGEYPVVVGQNFVVDIGKRFNVACSLEIDVGISSFNIIFSNVNFFVENGKFDKLRINNKRAFSIFSLAVDYVFGNITYD IVDSVELEFIEDGEFVFSFRVLFVASVSAIRTALIQAFDFNICKTPIDLKDILNSWSVRIDTN >Mature_623_residues MFMKLENMDEVWALPVCCNINNSIIDDFRLSDKYKDQVFYISYKDDIILKFIDIVDSNEFDLKLFDNKIDFEGQIPVVLY SESLDSLLGAEESIDFELKDIEQNDVYFDSRVKESGEFKIHNSYYEFSDYLNYCSDILLVRVCFKGDSLIIDADLDNIAL VKQIISNNFCIAFDKIIINPINNDCLNGLFPVSFNAVLQGIIIAKKLGQKVNVIYYKRHFLMAQSLSLKFSAVNYLSVEN RLAKIMLDLEIDRPLNFLYKFYFDCLRHIFSNLFFDVCVHINFISTKSNAIFFYDNYFFFESSVYNFIYSNFYNLAVSLS IEPLSYLLSYVKGEYNIFLKLFKEMDLKNSIMRKSSSISLNNEYNIFDVRRKGIGFAFLNLDPNLDSAFLSGNQTVSMSL HKDKLDVSIPYRVIDVNLINYLRNTLARTFSLSYDNVNFIVSDAFGEDVEPYSALIKESYLIEREVLAMKDELVVMIGED FKGEYPVVVGQNFVVDIGKRFNVACSLEIDVGISSFNIIFSNVNFFVENGKFDKLRINNKRAFSIFSLAVDYVFGNITYD IVDSVELEFIEDGEFVFSFRVLFVASVSAIRTALIQAFDFNICKTPIDLKDILNSWSVRIDTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72031; Mature: 72031
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMKLENMDEVWALPVCCNINNSIIDDFRLSDKYKDQVFYISYKDDIILKFIDIVDSNEF CEEEECCCCCEEEEEEEECCCCCHHCCCCCCCCCCCEEEEEEECCCEEEEEEEHHCCCCC DLKLFDNKIDFEGQIPVVLYSESLDSLLGAEESIDFELKDIEQNDVYFDSRVKESGEFKI EEEEECCEECCCCCCCEEEECCCHHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCCEEE HNSYYEFSDYLNYCSDILLVRVCFKGDSLIIDADLDNIALVKQIISNNFCIAFDKIIINP ECCHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCHHHHHHHHHCCCEEEEEEEEEEEC INNDCLNGLFPVSFNAVLQGIIIAKKLGQKVNVIYYKRHFLMAQSLSLKFSAVNYLSVEN CCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHCCEEEEEEEEEHHHH RLAKIMLDLEIDRPLNFLYKFYFDCLRHIFSNLFFDVCVHINFISTKSNAIFFYDNYFFF HHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEECEEEE ESSVYNFIYSNFYNLAVSLSIEPLSYLLSYVKGEYNIFLKLFKEMDLKNSIMRKSSSISL HHHHHHHHHHCCEEEEEEEEECHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCEEE NNEYNIFDVRRKGIGFAFLNLDPNLDSAFLSGNQTVSMSLHKDKLDVSIPYRVIDVNLIN CCCCCEEEEEECCCEEEEEEECCCCCHHEECCCCEEEEEEECCCCEEECCEEEEEHHHHH YLRNTLARTFSLSYDNVNFIVSDAFGEDVEPYSALIKESYLIEREVLAMKDELVVMIGED HHHHHHHHHEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC FKGEYPVVVGQNFVVDIGKRFNVACSLEIDVGISSFNIIFSNVNFFVENGKFDKLRINNK CCCCCCEEECCCEEEECCCCCCEEEEEEEECCCCEEEEEEEEEEEEEECCCEEEEEECCC RAFSIFSLAVDYVFGNITYDIVDSVELEFIEDGEFVFSFRVLFVASVSAIRTALIQAFDF CEEHHHHHHHHHHHCCEEEEEECCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCC NICKTPIDLKDILNSWSVRIDTN CCCCCCCCHHHHHCCCEEEEECC >Mature Secondary Structure MFMKLENMDEVWALPVCCNINNSIIDDFRLSDKYKDQVFYISYKDDIILKFIDIVDSNEF CEEEECCCCCEEEEEEEECCCCCHHCCCCCCCCCCCEEEEEEECCCEEEEEEEHHCCCCC DLKLFDNKIDFEGQIPVVLYSESLDSLLGAEESIDFELKDIEQNDVYFDSRVKESGEFKI EEEEECCEECCCCCCCEEEECCCHHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCCEEE HNSYYEFSDYLNYCSDILLVRVCFKGDSLIIDADLDNIALVKQIISNNFCIAFDKIIINP ECCHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCHHHHHHHHHCCCEEEEEEEEEEEC INNDCLNGLFPVSFNAVLQGIIIAKKLGQKVNVIYYKRHFLMAQSLSLKFSAVNYLSVEN CCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHCCEEEEEEEEEHHHH RLAKIMLDLEIDRPLNFLYKFYFDCLRHIFSNLFFDVCVHINFISTKSNAIFFYDNYFFF HHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEECEEEE ESSVYNFIYSNFYNLAVSLSIEPLSYLLSYVKGEYNIFLKLFKEMDLKNSIMRKSSSISL HHHHHHHHHHCCEEEEEEEEECHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCEEE NNEYNIFDVRRKGIGFAFLNLDPNLDSAFLSGNQTVSMSLHKDKLDVSIPYRVIDVNLIN CCCCCEEEEEECCCEEEEEEECCCCCHHEECCCCEEEEEEECCCCEEECCEEEEEHHHHH YLRNTLARTFSLSYDNVNFIVSDAFGEDVEPYSALIKESYLIEREVLAMKDELVVMIGED HHHHHHHHHEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC FKGEYPVVVGQNFVVDIGKRFNVACSLEIDVGISSFNIIFSNVNFFVENGKFDKLRINNK CCCCCCEEECCCEEEECCCCCCEEEEEEEECCCCEEEEEEEEEEEEEECCCEEEEEECCC RAFSIFSLAVDYVFGNITYDIVDSVELEFIEDGEFVFSFRVLFVASVSAIRTALIQAFDF CEEHHHHHHHHHHHCCEEEEEECCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCC NICKTPIDLKDILNSWSVRIDTN CCCCCCCCHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA