Definition | Borrelia hermsii DAH chromosome, complete genome. |
---|---|
Accession | NC_010673 |
Length | 922,307 |
Click here to switch to the map view.
The map label for this gene is nadE2 [H]
Identifier: 187918386
GI number: 187918386
Start: 538358
End: 539926
Strand: Direct
Name: nadE2 [H]
Synonym: BH0522
Alternate gene names: 187918386
Gene position: 538358-539926 (Clockwise)
Preceding gene: 187918385
Following gene: 187918387
Centisome position: 58.37
GC content: 30.27
Gene sequence:
>1569_bases TTGCTTATTATTTATTTTGTGAAAATATGTATAGCGCAGACAAAATGTAGACTTTTTAAGTTTAAACAGATTCTGAGTGA GTTTAAGGAAAATTATGAGTATGCTATTCAAAATAAGGTTGATATTTTAGTTTTTCCTTTTATTTTTATTGGGGGCATTG AGTACAAGAATTTATTTGATAGGGCAGAATATTTGAGCAAAATTCTTTATTGCCTTGATTTTATAAAAGAGCAAGTTGAT GATAGACTTTGTGTTGTATTTGGACATTATAGTTTTTATGAGGGTAAATTATTAGATTGCATATCTGTAGTAAATAATCA TCGGTTTGTCTTGACATCTAGGGAAGTCAATGTGCCGGTTTTATTTGATTATAAGGGTAAAAGTATTGCTGTATTAAATC TGGGAGATGAGCTTTTATTTCAGGGATTTGATGAAAAATTTAGTGCGTCTTTTAGTAACATTGATTATCTCTTAATTCCA TCAAAGTCTTATTTTACTGGAGATAAGAATAATTTGAGGCTTGAATTTTTCAAAAAAATAGCTGTTAAAAATAATTTGGA AGTTGCTTATGCCAATTTATATGGTACTTATGATTCTATTGTATTTGATGGTTTGAGTTTTTTTATTAATAAATACGGTA AAATAAAACAGGCTAGAGAATTTAAAGACGATATTTTATTTAATGAAAGATTTCATGATTTAGAGCTTGACTGTGAGTCT AAAATTTTTGATAGACTTATTGAAGCATTGATAAGTAGTTTAAAAGAATATGTTAAGCTTTCTGGGTTTGATAAAGTTCA TTTGGGTGTTTCTGGAGGCATTGATTCTGCTCTTGTTGCTTATATTGCATGTGTTGCTTTAGGGGCTCATAGAGTTGTTG GCGTTTCTATGCCTAGTAGGTTTTCATCAAAAGGATCTGTTTTTGATGCAAAAGAACTTGCTAGAGAATTGGGATTTAAG TTAATTGATATGCCTATTGAAAGCATGTTTCAATCTGCTTTAGAGTTTTTTGATGGGTATTTTGATACAAAGGGAGTTAC TGAGGAAAATCTTCAAGCTAGACTTAGAGGGATTTTTTTAATGTCTTATAGTAATGCAAATAAATCTTTGCTTCTAAATA CTGGAAATAAAAGTGAAATTGCTGTTGGTTATTGCACTCTTTATGGCGATTCTTGTGGTGGAATTGCTTTAATTGGTGAT TTATTTAAGCGAGATGTTTATAGTCTTGCAAAATATATTAATTTAAAAGAAGGAAGATCAGTTATTCCTGTTGATATTCT TTTAAAAGAACCTTCTGCCGAGCTTAGACCTGGTCAAAAAGACAGCGATTCTCTTCCTAGGTATGAAATTCTTGATGAGA TATTAAGTCAATATTTACTTAAAAATGAGTCCTTGGAGTTGCTTTATGAATCTTTTGGAAAAGAAGTGGTTACAAAGGTG TTAGATCTTTATTCTAGAAGTGAGTATAAAAGAAGGAAAGGCCCTATGATAGTTAAAGTTTCTAGAAAAGCTTTTGGTAA TGACATTTTACTTCCTATTTCAAGAGTTGCGTTAACTGAGGATGAATAG
Upstream 100 bases:
>100_bases GTAGGTAGGTATACTCCTAAGATAGCCCCAATTAAAATGAAAGATGATATTGAGAAATGGTTAAGTGTGATTTAGAGTTT TCTTGTAATTTTTTCTGTTA
Downstream 100 bases:
>100_bases TAATAATGTTATTAGTATATTAAATGAGTTTAGTTTAAAATTAGAAGAGATTTTCTTGCTTATCAATACTGATTCTTCTG AACTTTACAAAGAGACTCCT
Product: glutamine-dependent NAD(+) synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MLIIYFVKICIAQTKCRLFKFKQILSEFKENYEYAIQNKVDILVFPFIFIGGIEYKNLFDRAEYLSKILYCLDFIKEQVD DRLCVVFGHYSFYEGKLLDCISVVNNHRFVLTSREVNVPVLFDYKGKSIAVLNLGDELLFQGFDEKFSASFSNIDYLLIP SKSYFTGDKNNLRLEFFKKIAVKNNLEVAYANLYGTYDSIVFDGLSFFINKYGKIKQAREFKDDILFNERFHDLELDCES KIFDRLIEALISSLKEYVKLSGFDKVHLGVSGGIDSALVAYIACVALGAHRVVGVSMPSRFSSKGSVFDAKELARELGFK LIDMPIESMFQSALEFFDGYFDTKGVTEENLQARLRGIFLMSYSNANKSLLLNTGNKSEIAVGYCTLYGDSCGGIALIGD LFKRDVYSLAKYINLKEGRSVIPVDILLKEPSAELRPGQKDSDSLPRYEILDEILSQYLLKNESLELLYESFGKEVVTKV LDLYSRSEYKRRKGPMIVKVSRKAFGNDILLPISRVALTEDE
Sequences:
>Translated_522_residues MLIIYFVKICIAQTKCRLFKFKQILSEFKENYEYAIQNKVDILVFPFIFIGGIEYKNLFDRAEYLSKILYCLDFIKEQVD DRLCVVFGHYSFYEGKLLDCISVVNNHRFVLTSREVNVPVLFDYKGKSIAVLNLGDELLFQGFDEKFSASFSNIDYLLIP SKSYFTGDKNNLRLEFFKKIAVKNNLEVAYANLYGTYDSIVFDGLSFFINKYGKIKQAREFKDDILFNERFHDLELDCES KIFDRLIEALISSLKEYVKLSGFDKVHLGVSGGIDSALVAYIACVALGAHRVVGVSMPSRFSSKGSVFDAKELARELGFK LIDMPIESMFQSALEFFDGYFDTKGVTEENLQARLRGIFLMSYSNANKSLLLNTGNKSEIAVGYCTLYGDSCGGIALIGD LFKRDVYSLAKYINLKEGRSVIPVDILLKEPSAELRPGQKDSDSLPRYEILDEILSQYLLKNESLELLYESFGKEVVTKV LDLYSRSEYKRRKGPMIVKVSRKAFGNDILLPISRVALTEDE >Mature_522_residues MLIIYFVKICIAQTKCRLFKFKQILSEFKENYEYAIQNKVDILVFPFIFIGGIEYKNLFDRAEYLSKILYCLDFIKEQVD DRLCVVFGHYSFYEGKLLDCISVVNNHRFVLTSREVNVPVLFDYKGKSIAVLNLGDELLFQGFDEKFSASFSNIDYLLIP SKSYFTGDKNNLRLEFFKKIAVKNNLEVAYANLYGTYDSIVFDGLSFFINKYGKIKQAREFKDDILFNERFHDLELDCES KIFDRLIEALISSLKEYVKLSGFDKVHLGVSGGIDSALVAYIACVALGAHRVVGVSMPSRFSSKGSVFDAKELARELGFK LIDMPIESMFQSALEFFDGYFDTKGVTEENLQARLRGIFLMSYSNANKSLLLNTGNKSEIAVGYCTLYGDSCGGIALIGD LFKRDVYSLAKYINLKEGRSVIPVDILLKEPSAELRPGQKDSDSLPRYEILDEILSQYLLKNESLELLYESFGKEVVTKV LDLYSRSEYKRRKGPMIVKVSRKAFGNDILLPISRVALTEDE
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR000132 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 59561; Mature: 59561
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIIYFVKICIAQTKCRLFKFKQILSEFKENYEYAIQNKVDILVFPFIFIGGIEYKNLFD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHEEEHHHHHCCCHHHHHHH RAEYLSKILYCLDFIKEQVDDRLCVVFGHYSFYEGKLLDCISVVNNHRFVLTSREVNVPV HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCE LFDYKGKSIAVLNLGDELLFQGFDEKFSASFSNIDYLLIPSKSYFTGDKNNLRLEFFKKI EEECCCCEEEEEECCHHHHHCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH AVKNNLEVAYANLYGTYDSIVFDGLSFFINKYGKIKQAREFKDDILFNERFHDLELDCES HHCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH KIFDRLIEALISSLKEYVKLSGFDKVHLGVSGGIDSALVAYIACVALGAHRVVGVSMPSR HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHEEEECCCCC FSSKGSVFDAKELARELGFKLIDMPIESMFQSALEFFDGYFDTKGVTEENLQARLRGIFL CCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEE MSYSNANKSLLLNTGNKSEIAVGYCTLYGDSCGGIALIGDLFKRDVYSLAKYINLKEGRS EEECCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC VIPVDILLKEPSAELRPGQKDSDSLPRYEILDEILSQYLLKNESLELLYESFGKEVVTKV CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LDLYSRSEYKRRKGPMIVKVSRKAFGNDILLPISRVALTEDE HHHHHHHHHHHHCCCEEEEEEHHHCCCCEEEEHHHEEECCCC >Mature Secondary Structure MLIIYFVKICIAQTKCRLFKFKQILSEFKENYEYAIQNKVDILVFPFIFIGGIEYKNLFD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHEEEHHHHHCCCHHHHHHH RAEYLSKILYCLDFIKEQVDDRLCVVFGHYSFYEGKLLDCISVVNNHRFVLTSREVNVPV HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCE LFDYKGKSIAVLNLGDELLFQGFDEKFSASFSNIDYLLIPSKSYFTGDKNNLRLEFFKKI EEECCCCEEEEEECCHHHHHCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH AVKNNLEVAYANLYGTYDSIVFDGLSFFINKYGKIKQAREFKDDILFNERFHDLELDCES HHCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH KIFDRLIEALISSLKEYVKLSGFDKVHLGVSGGIDSALVAYIACVALGAHRVVGVSMPSR HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHEEEECCCCC FSSKGSVFDAKELARELGFKLIDMPIESMFQSALEFFDGYFDTKGVTEENLQARLRGIFL CCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEE MSYSNANKSLLLNTGNKSEIAVGYCTLYGDSCGGIALIGDLFKRDVYSLAKYINLKEGRS EEECCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC VIPVDILLKEPSAELRPGQKDSDSLPRYEILDEILSQYLLKNESLELLYESFGKEVVTKV CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LDLYSRSEYKRRKGPMIVKVSRKAFGNDILLPISRVALTEDE HHHHHHHHHHHHCCCEEEEEEHHHCCCCEEEEHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]