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The map label for this gene is secY [H]

Identifier: 187918364

GI number: 187918364

Start: 510753

End: 512057

Strand: Direct

Name: secY [H]

Synonym: BH0498

Alternate gene names: 187918364

Gene position: 510753-512057 (Clockwise)

Preceding gene: 187918363

Following gene: 187918365

Centisome position: 55.38

GC content: 30.8

Gene sequence:

>1305_bases
ATGAAGGGTTTGTTTTTTAATTTATTTTCAATTAAGGATTTAAGGAGCAAATTTTTATTTACTCTATTTATTCTTTTTAT
TTTTAGAGTGGGTTCTTACTTGCCAATACCAGGAGTAGATCCTGTGGCTCTTAGAAGTTATTTTAAATCTCAGTCAGATT
TTTCAATTACTAATTATTTTGATTTTTTTTCAGGTGGTGCTTTTAGTAATTTTTCTATATTTATGCTTAGCATAGGTCCT
TATATTTCAGCATCAATTATTATTCAACTTCTTGTTTATTCTTTTCCTTCTCTTAAAAAGATGCAAGAAGGGGATAATGG
AAGGAAAAAAATCAAAAAATACACAAAATATCTAACGATTGTTGCGGCAGTAGCCCAAGGATATGCTACTAGTCTTTATG
CTAAAAGTATTCCAGGAGCGCTTAATATACCTTTTTATAGATACATTTTCATTGCTATTTTAACAGTTACAACAGGTACT
TTTGTTCTTTTATGGCTTGGTGAGCAAATTAATCAGAGAGGAATTGGGAATGGTGTATCTTTAATAATCTTTTCAGGAAT
AGTAGTTAGACTTCAAGCAGCTTTATTTAATCTTTTTCAAAGCATGAGAGATCCATTGCAAAATATTAATCCTGTCTTTG
TGATATTAGTGCTAGGTGTTTTTATTTTAGTTGTGATATTAATCATATATGAGTATAAGGCACAAAGACGAATTGCTATT
CATTATGCTAGAGCAAACTCCAGGAATACAGTTAGTTCGTATTTGCCAATCAAGCTTAACCCGTCAGGTGTTTTACCTGT
TATTTTTGCATCTGTGCTTATTACCTTGCCTTTGCAAATTTTGAGTGGATTTGCTGGAACTTCTGCTCTATCAAGGCAAA
TTTTATCTTATTTAAGACCCAATGGGCTTTATTATACTTTATTGAATGTAGTTTTAATAATAGGATTTACCTATTTTTAT
TCAAAGATACAATTAAGCCCAAAAGATATAAGTAATAATATTCGAAAAAATGGGGGAACTATTCCGGGTATAAAGGCAGA
TGAGATGGAGGGCTATTTGGATAAAATTATGAATAGAACATTATTTTCAGGCTCTATCTTTCTGTCTATTATTGCAATTA
TTCCGTTTTTAGTGCAAAATATTTTTAGATTTCCTTATGATGTCTCAAGGATTATGGGTAGTTCTTCACTGCTTATTATG
GTAGGAGTAGCTCTTGATACATTAATTCAGATTGATGCATATTTAAAGACTCAAGGATTGTCTCGTGGAACTGGTAAAAA
GTATGCTTTTTTGCAGAAAATTTAG

Upstream 100 bases:

>100_bases
TAAGAAGGTGAATTTTGAAGTTACTCGTATTTCAAAGTCTGCTGAAGAATTGGCAACAAAAATTGGTTGCAGTATTAAAT
TACTTTAGAATGGTAGTGAA

Downstream 100 bases:

>100_bases
GAGTAATTTATGAAAGTTAGGGTAAGCGTAAAGCCAATTTGTGAAAAGTGTAAAGTAATAAAGAGAAAAGGTGTTTTAAG
AATTATTTGTGATAATCTTA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKGLFFNLFSIKDLRSKFLFTLFILFIFRVGSYLPIPGVDPVALRSYFKSQSDFSITNYFDFFSGGAFSNFSIFMLSIGP
YISASIIIQLLVYSFPSLKKMQEGDNGRKKIKKYTKYLTIVAAVAQGYATSLYAKSIPGALNIPFYRYIFIAILTVTTGT
FVLLWLGEQINQRGIGNGVSLIIFSGIVVRLQAALFNLFQSMRDPLQNINPVFVILVLGVFILVVILIIYEYKAQRRIAI
HYARANSRNTVSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAGTSALSRQILSYLRPNGLYYTLLNVVLIIGFTYFY
SKIQLSPKDISNNIRKNGGTIPGIKADEMEGYLDKIMNRTLFSGSIFLSIIAIIPFLVQNIFRFPYDVSRIMGSSSLLIM
VGVALDTLIQIDAYLKTQGLSRGTGKKYAFLQKI

Sequences:

>Translated_434_residues
MKGLFFNLFSIKDLRSKFLFTLFILFIFRVGSYLPIPGVDPVALRSYFKSQSDFSITNYFDFFSGGAFSNFSIFMLSIGP
YISASIIIQLLVYSFPSLKKMQEGDNGRKKIKKYTKYLTIVAAVAQGYATSLYAKSIPGALNIPFYRYIFIAILTVTTGT
FVLLWLGEQINQRGIGNGVSLIIFSGIVVRLQAALFNLFQSMRDPLQNINPVFVILVLGVFILVVILIIYEYKAQRRIAI
HYARANSRNTVSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAGTSALSRQILSYLRPNGLYYTLLNVVLIIGFTYFY
SKIQLSPKDISNNIRKNGGTIPGIKADEMEGYLDKIMNRTLFSGSIFLSIIAIIPFLVQNIFRFPYDVSRIMGSSSLLIM
VGVALDTLIQIDAYLKTQGLSRGTGKKYAFLQKI
>Mature_434_residues
MKGLFFNLFSIKDLRSKFLFTLFILFIFRVGSYLPIPGVDPVALRSYFKSQSDFSITNYFDFFSGGAFSNFSIFMLSIGP
YISASIIIQLLVYSFPSLKKMQEGDNGRKKIKKYTKYLTIVAAVAQGYATSLYAKSIPGALNIPFYRYIFIAILTVTTGT
FVLLWLGEQINQRGIGNGVSLIIFSGIVVRLQAALFNLFQSMRDPLQNINPVFVILVLGVFILVVILIIYEYKAQRRIAI
HYARANSRNTVSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAGTSALSRQILSYLRPNGLYYTLLNVVLIIGFTYFY
SKIQLSPKDISNNIRKNGGTIPGIKADEMEGYLDKIMNRTLFSGSIFLSIIAIIPFLVQNIFRFPYDVSRIMGSSSLLIM
VGVALDTLIQIDAYLKTQGLSRGTGKKYAFLQKI

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=416, Percent_Identity=37.7403846153846, Blast_Score=242, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48556; Mature: 48556

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHHHHCC
>Mature Secondary Structure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CCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]