Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is rpmC [H]

Identifier: 187918352

GI number: 187918352

Start: 506213

End: 506413

Strand: Direct

Name: rpmC [H]

Synonym: BH0486

Alternate gene names: 187918352

Gene position: 506213-506413 (Clockwise)

Preceding gene: 187918351

Following gene: 187918353

Centisome position: 54.89

GC content: 32.84

Gene sequence:

>201_bases
ATGTTAAAAAAATTTAAGGATCTTACTCTTGAGGATATGAAAGCTAGGAGATTGGCTTTAAGAAAGGAATATATGGATTT
AAGATTTAAGGCTGTGGTTGGTCATGTTGAGAATCCTTTAAAAAAACGAGAGCTGAGGCGAGACATTGCAAGGCTTAATA
CAATAATTCATGAATATGCAATAGGTATTAGGAAGGTTTAA

Upstream 100 bases:

>100_bases
TGGAGTGCCTAGAGAGCTTGCTGAGGCAGCAATGATGCTTGCCAGTTCTAAGCTCCCGGTTAAGACTACATTTGTAGTAA
GGCGAGATTTGAGGTGAATT

Downstream 100 bases:

>100_bases
GTATTATGGCAAGGGAAAATAAGAAAGATCTAATTGGAAAGGTTGTTAGTGATAAGATGAGTAAAACAATAGTTGTTGAG
ATTGTTCAAAGAAAAATGCA

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MLKKFKDLTLEDMKARRLALRKEYMDLRFKAVVGHVENPLKKRELRRDIARLNTIIHEYAIGIRKV

Sequences:

>Translated_66_residues
MLKKFKDLTLEDMKARRLALRKEYMDLRFKAVVGHVENPLKKRELRRDIARLNTIIHEYAIGIRKV
>Mature_66_residues
MLKKFKDLTLEDMKARRLALRKEYMDLRFKAVVGHVENPLKKRELRRDIARLNTIIHEYAIGIRKV

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001854 [H]

Pfam domain/function: PF00831 Ribosomal_L29 [H]

EC number: NA

Molecular weight: Translated: 7950; Mature: 7950

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKFKDLTLEDMKARRLALRKEYMDLRFKAVVGHVENPLKKRELRRDIARLNTIIHEYA
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IGIRKV
HHHCCC
>Mature Secondary Structure
MLKKFKDLTLEDMKARRLALRKEYMDLRFKAVVGHVENPLKKRELRRDIARLNTIIHEYA
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IGIRKV
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA