Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is rpmC [H]
Identifier: 187918352
GI number: 187918352
Start: 506213
End: 506413
Strand: Direct
Name: rpmC [H]
Synonym: BH0486
Alternate gene names: 187918352
Gene position: 506213-506413 (Clockwise)
Preceding gene: 187918351
Following gene: 187918353
Centisome position: 54.89
GC content: 32.84
Gene sequence:
>201_bases ATGTTAAAAAAATTTAAGGATCTTACTCTTGAGGATATGAAAGCTAGGAGATTGGCTTTAAGAAAGGAATATATGGATTT AAGATTTAAGGCTGTGGTTGGTCATGTTGAGAATCCTTTAAAAAAACGAGAGCTGAGGCGAGACATTGCAAGGCTTAATA CAATAATTCATGAATATGCAATAGGTATTAGGAAGGTTTAA
Upstream 100 bases:
>100_bases TGGAGTGCCTAGAGAGCTTGCTGAGGCAGCAATGATGCTTGCCAGTTCTAAGCTCCCGGTTAAGACTACATTTGTAGTAA GGCGAGATTTGAGGTGAATT
Downstream 100 bases:
>100_bases GTATTATGGCAAGGGAAAATAAGAAAGATCTAATTGGAAAGGTTGTTAGTGATAAGATGAGTAAAACAATAGTTGTTGAG ATTGTTCAAAGAAAAATGCA
Product: 50S ribosomal protein L29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MLKKFKDLTLEDMKARRLALRKEYMDLRFKAVVGHVENPLKKRELRRDIARLNTIIHEYAIGIRKV
Sequences:
>Translated_66_residues MLKKFKDLTLEDMKARRLALRKEYMDLRFKAVVGHVENPLKKRELRRDIARLNTIIHEYAIGIRKV >Mature_66_residues MLKKFKDLTLEDMKARRLALRKEYMDLRFKAVVGHVENPLKKRELRRDIARLNTIIHEYAIGIRKV
Specific function: Unknown
COG id: COG0255
COG function: function code J; Ribosomal protein L29
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L29P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001854 [H]
Pfam domain/function: PF00831 Ribosomal_L29 [H]
EC number: NA
Molecular weight: Translated: 7950; Mature: 7950
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKFKDLTLEDMKARRLALRKEYMDLRFKAVVGHVENPLKKRELRRDIARLNTIIHEYA CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IGIRKV HHHCCC >Mature Secondary Structure MLKKFKDLTLEDMKARRLALRKEYMDLRFKAVVGHVENPLKKRELRRDIARLNTIIHEYA CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IGIRKV HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA