Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is 187918334

Identifier: 187918334

GI number: 187918334

Start: 493325

End: 494014

Strand: Direct

Name: 187918334

Synonym: BH0467

Alternate gene names: NA

Gene position: 493325-494014 (Clockwise)

Preceding gene: 187918333

Following gene: 187918335

Centisome position: 53.49

GC content: 28.12

Gene sequence:

>690_bases
ATGAGAGTAGTAGAGAGGAAATTTTATTATGAGTTTGAATTAGATTCTAGCATTAAATTGATCTATACTAAGAAGCCTTT
TGATTTGGATATAAGAGATATTAATAGCGATAATTTAAGTTTTATTCCTAAGGATAAAAAAATAAAATATTTAAAACAAT
TACATACGAATGTTGTTTATAAAGTTTCTGATGATTTTGTTAATTTTCAGGAAGGAGATGGACTTGTGTCTTCTTCTTGC
AATGTTGCCCTTCTTGCTTACTATGCAGATTGTCTTCCGATATATATGTTTGACAAATCAAAAAAATATATCGGGCTTGC
TCACAGTGGATATAAGGGTAGTTTTAAGCTTATCATTTTAAAAATGTTACTTATGTTTGAGAGTATGGGTTCAAATTTTG
AGGATTTGAAAGTTATCTTTGGGCCTTATAATAGGTCATGCTGTTATGAGGTTTCATCTGAGTTTCTATCAGAAGTGAAT
TTAAAATTTAGTAAAAAATTGTTAGATATATCTTTTTGTAAAAAGGATGATAAAATATATTTTGACAATGCCAATTTTAA
TTTGGGATTGATTTCTAATTTTAATTTAGATGTTGAGGATTCAGGTTTGTGTACTTACTGTAATTACAATCTTTATTCTC
ATAGAAAGTTTAGGGGCAAGAGAAGTTACGCTTCGATTTGGAGAATTTAA

Upstream 100 bases:

>100_bases
ATATTATTTATCAAGGACAGGTGCTTGATGAGGGCAATGTTGATTATGTTATAAATAGCGAGAAAGCCAAAAAGCTTTAT
CTTGGTGAAGAGTTTAGATT

Downstream 100 bases:

>100_bases
TTTGACTGTTAAAGAGTTATCATCCAATTTGGATGAAATTTTTAAGGTAAAAGATTATAGGAATATTGATAAGAGTCTTA
ATGGGCTTCAAGTAGGTAAT

Product: hypothetical cytosolic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRVVERKFYYEFELDSSIKLIYTKKPFDLDIRDINSDNLSFIPKDKKIKYLKQLHTNVVYKVSDDFVNFQEGDGLVSSSC
NVALLAYYADCLPIYMFDKSKKYIGLAHSGYKGSFKLIILKMLLMFESMGSNFEDLKVIFGPYNRSCCYEVSSEFLSEVN
LKFSKKLLDISFCKKDDKIYFDNANFNLGLISNFNLDVEDSGLCTYCNYNLYSHRKFRGKRSYASIWRI

Sequences:

>Translated_229_residues
MRVVERKFYYEFELDSSIKLIYTKKPFDLDIRDINSDNLSFIPKDKKIKYLKQLHTNVVYKVSDDFVNFQEGDGLVSSSC
NVALLAYYADCLPIYMFDKSKKYIGLAHSGYKGSFKLIILKMLLMFESMGSNFEDLKVIFGPYNRSCCYEVSSEFLSEVN
LKFSKKLLDISFCKKDDKIYFDNANFNLGLISNFNLDVEDSGLCTYCNYNLYSHRKFRGKRSYASIWRI
>Mature_229_residues
MRVVERKFYYEFELDSSIKLIYTKKPFDLDIRDINSDNLSFIPKDKKIKYLKQLHTNVVYKVSDDFVNFQEGDGLVSSSC
NVALLAYYADCLPIYMFDKSKKYIGLAHSGYKGSFKLIILKMLLMFESMGSNFEDLKVIFGPYNRSCCYEVSSEFLSEVN
LKFSKKLLDISFCKKDDKIYFDNANFNLGLISNFNLDVEDSGLCTYCNYNLYSHRKFRGKRSYASIWRI

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26809; Mature: 26809

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVERKFYYEFELDSSIKLIYTKKPFDLDIRDINSDNLSFIPKDKKIKYLKQLHTNVVY
CCCEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCCCCEECCCCHHHHHHHHHHCCEEE
KVSDDFVNFQEGDGLVSSSCNVALLAYYADCLPIYMFDKSKKYIGLAHSGYKGSFKLIIL
EEECCEECCCCCCCEEECCCCEEEEEEHHHHEEEEEEECCCCEEEEEECCCCCCHHHHHH
KMLLMFESMGSNFEDLKVIFGPYNRSCCYEVSSEFLSEVNLKFSKKLLDISFCKKDDKIY
HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCEEE
FDNANFNLGLISNFNLDVEDSGLCTYCNYNLYSHRKFRGKRSYASIWRI
EECCCCEEEEEECCCCCCCCCCEEEEEECCCEECHHHCCCCCHHHHCCC
>Mature Secondary Structure
MRVVERKFYYEFELDSSIKLIYTKKPFDLDIRDINSDNLSFIPKDKKIKYLKQLHTNVVY
CCCEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCCCCEECCCCHHHHHHHHHHCCEEE
KVSDDFVNFQEGDGLVSSSCNVALLAYYADCLPIYMFDKSKKYIGLAHSGYKGSFKLIIL
EEECCEECCCCCCCEEECCCCEEEEEEHHHHEEEEEEECCCCEEEEEECCCCCCHHHHHH
KMLLMFESMGSNFEDLKVIFGPYNRSCCYEVSSEFLSEVNLKFSKKLLDISFCKKDDKIY
HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCEEE
FDNANFNLGLISNFNLDVEDSGLCTYCNYNLYSHRKFRGKRSYASIWRI
EECCCCEEEEEECCCCCCCCCCEEEEEECCCEECHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]