Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918334
Identifier: 187918334
GI number: 187918334
Start: 493325
End: 494014
Strand: Direct
Name: 187918334
Synonym: BH0467
Alternate gene names: NA
Gene position: 493325-494014 (Clockwise)
Preceding gene: 187918333
Following gene: 187918335
Centisome position: 53.49
GC content: 28.12
Gene sequence:
>690_bases ATGAGAGTAGTAGAGAGGAAATTTTATTATGAGTTTGAATTAGATTCTAGCATTAAATTGATCTATACTAAGAAGCCTTT TGATTTGGATATAAGAGATATTAATAGCGATAATTTAAGTTTTATTCCTAAGGATAAAAAAATAAAATATTTAAAACAAT TACATACGAATGTTGTTTATAAAGTTTCTGATGATTTTGTTAATTTTCAGGAAGGAGATGGACTTGTGTCTTCTTCTTGC AATGTTGCCCTTCTTGCTTACTATGCAGATTGTCTTCCGATATATATGTTTGACAAATCAAAAAAATATATCGGGCTTGC TCACAGTGGATATAAGGGTAGTTTTAAGCTTATCATTTTAAAAATGTTACTTATGTTTGAGAGTATGGGTTCAAATTTTG AGGATTTGAAAGTTATCTTTGGGCCTTATAATAGGTCATGCTGTTATGAGGTTTCATCTGAGTTTCTATCAGAAGTGAAT TTAAAATTTAGTAAAAAATTGTTAGATATATCTTTTTGTAAAAAGGATGATAAAATATATTTTGACAATGCCAATTTTAA TTTGGGATTGATTTCTAATTTTAATTTAGATGTTGAGGATTCAGGTTTGTGTACTTACTGTAATTACAATCTTTATTCTC ATAGAAAGTTTAGGGGCAAGAGAAGTTACGCTTCGATTTGGAGAATTTAA
Upstream 100 bases:
>100_bases ATATTATTTATCAAGGACAGGTGCTTGATGAGGGCAATGTTGATTATGTTATAAATAGCGAGAAAGCCAAAAAGCTTTAT CTTGGTGAAGAGTTTAGATT
Downstream 100 bases:
>100_bases TTTGACTGTTAAAGAGTTATCATCCAATTTGGATGAAATTTTTAAGGTAAAAGATTATAGGAATATTGATAAGAGTCTTA ATGGGCTTCAAGTAGGTAAT
Product: hypothetical cytosolic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MRVVERKFYYEFELDSSIKLIYTKKPFDLDIRDINSDNLSFIPKDKKIKYLKQLHTNVVYKVSDDFVNFQEGDGLVSSSC NVALLAYYADCLPIYMFDKSKKYIGLAHSGYKGSFKLIILKMLLMFESMGSNFEDLKVIFGPYNRSCCYEVSSEFLSEVN LKFSKKLLDISFCKKDDKIYFDNANFNLGLISNFNLDVEDSGLCTYCNYNLYSHRKFRGKRSYASIWRI
Sequences:
>Translated_229_residues MRVVERKFYYEFELDSSIKLIYTKKPFDLDIRDINSDNLSFIPKDKKIKYLKQLHTNVVYKVSDDFVNFQEGDGLVSSSC NVALLAYYADCLPIYMFDKSKKYIGLAHSGYKGSFKLIILKMLLMFESMGSNFEDLKVIFGPYNRSCCYEVSSEFLSEVN LKFSKKLLDISFCKKDDKIYFDNANFNLGLISNFNLDVEDSGLCTYCNYNLYSHRKFRGKRSYASIWRI >Mature_229_residues MRVVERKFYYEFELDSSIKLIYTKKPFDLDIRDINSDNLSFIPKDKKIKYLKQLHTNVVYKVSDDFVNFQEGDGLVSSSC NVALLAYYADCLPIYMFDKSKKYIGLAHSGYKGSFKLIILKMLLMFESMGSNFEDLKVIFGPYNRSCCYEVSSEFLSEVN LKFSKKLLDISFCKKDDKIYFDNANFNLGLISNFNLDVEDSGLCTYCNYNLYSHRKFRGKRSYASIWRI
Specific function: Unknown
COG id: COG1496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0124 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003730 - InterPro: IPR011324 [H]
Pfam domain/function: PF02578 Cu-oxidase_4 [H]
EC number: NA
Molecular weight: Translated: 26809; Mature: 26809
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVERKFYYEFELDSSIKLIYTKKPFDLDIRDINSDNLSFIPKDKKIKYLKQLHTNVVY CCCEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCCCCEECCCCHHHHHHHHHHCCEEE KVSDDFVNFQEGDGLVSSSCNVALLAYYADCLPIYMFDKSKKYIGLAHSGYKGSFKLIIL EEECCEECCCCCCCEEECCCCEEEEEEHHHHEEEEEEECCCCEEEEEECCCCCCHHHHHH KMLLMFESMGSNFEDLKVIFGPYNRSCCYEVSSEFLSEVNLKFSKKLLDISFCKKDDKIY HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCEEE FDNANFNLGLISNFNLDVEDSGLCTYCNYNLYSHRKFRGKRSYASIWRI EECCCCEEEEEECCCCCCCCCCEEEEEECCCEECHHHCCCCCHHHHCCC >Mature Secondary Structure MRVVERKFYYEFELDSSIKLIYTKKPFDLDIRDINSDNLSFIPKDKKIKYLKQLHTNVVY CCCEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCCCCEECCCCHHHHHHHHHHCCEEE KVSDDFVNFQEGDGLVSSSCNVALLAYYADCLPIYMFDKSKKYIGLAHSGYKGSFKLIIL EEECCEECCCCCCCEEECCCCEEEEEEHHHHEEEEEEECCCCEEEEEECCCCCCHHHHHH KMLLMFESMGSNFEDLKVIFGPYNRSCCYEVSSEFLSEVNLKFSKKLLDISFCKKDDKIY HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCEEE FDNANFNLGLISNFNLDVEDSGLCTYCNYNLYSHRKFRGKRSYASIWRI EECCCCEEEEEECCCCCCCCCCEEEEEECCCEECHHHCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]