Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is yvyE [H]
Identifier: 187918296
GI number: 187918296
Start: 452510
End: 453088
Strand: Direct
Name: yvyE [H]
Synonym: BH0430
Alternate gene names: 187918296
Gene position: 452510-453088 (Clockwise)
Preceding gene: 187918294
Following gene: 187918297
Centisome position: 49.06
GC content: 26.94
Gene sequence:
>579_bases ATGATACTAATTCCTCAAGAAAATACCTATTCAAAAATTGAAGTAAAAAAATCAATTTTCTTATCATATATTTTCCATGT AAAGGGAAAAGAAGAAATAAATAAAATATTAAAAGAATATAAATTAAAATTTAAAAATGCAACTCATGTTGTCTACGGAT TTAGAATTGGCAATTCAAATTCATTTATAAGCGGAATGAACGATGACAAAGAACCACGTTCAACAGCTGGAAAACCTACG CTAGAGGCCATATTAAACAAAAACTTAACAGATACCCTAATTATTACGGTGCGCTATTTTGGAGGAACTCTGCTTGGAAA ACAAGGTTTAACTAAAGCATATTCCAAGGCAGCACAAGAAGTAATTAATAAATCAAATCTAATAGAAAAGGAAGAAATGG AAACATTATGCCTTAATCTAAACTACAACCAATATAATTTACTTATACGAATAAAAAATAAGATGGGGATTAAAATTATA GACGCTAATTTCCTAGATAAAATAAATACTACAATAAAATTTAACACAAAAAACAAAAAAAATATCATGACATTTTTACA AGAAAACTCCCTAATCTAA
Upstream 100 bases:
>100_bases TTAAACACTTGCACTCAGAATTTAAAAAAACAATCATTATTAATAATATACATAAATTAAAAATACTTCAACATAAAAAA ATGATATATTATTAAATTGA
Downstream 100 bases:
>100_bases TTAAATTAAATTCCATACGCATACAGACATTTGATCCAACTGAATGTCTATATGCGTATATTGCGCTAGCCACTTAAAAA AATAATTTACATATATTATT
Product: proline dipeptidase PepQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MILIPQENTYSKIEVKKSIFLSYIFHVKGKEEINKILKEYKLKFKNATHVVYGFRIGNSNSFISGMNDDKEPRSTAGKPT LEAILNKNLTDTLIITVRYFGGTLLGKQGLTKAYSKAAQEVINKSNLIEKEEMETLCLNLNYNQYNLLIRIKNKMGIKII DANFLDKINTTIKFNTKNKKNIMTFLQENSLI
Sequences:
>Translated_192_residues MILIPQENTYSKIEVKKSIFLSYIFHVKGKEEINKILKEYKLKFKNATHVVYGFRIGNSNSFISGMNDDKEPRSTAGKPT LEAILNKNLTDTLIITVRYFGGTLLGKQGLTKAYSKAAQEVINKSNLIEKEEMETLCLNLNYNQYNLLIRIKNKMGIKII DANFLDKINTTIKFNTKNKKNIMTFLQENSLI >Mature_192_residues MILIPQENTYSKIEVKKSIFLSYIFHVKGKEEINKILKEYKLKFKNATHVVYGFRIGNSNSFISGMNDDKEPRSTAGKPT LEAILNKNLTDTLIITVRYFGGTLLGKQGLTKAYSKAAQEVINKSNLIEKEEMETLCLNLNYNQYNLLIRIKNKMGIKII DANFLDKINTTIKFNTKNKKNIMTFLQENSLI
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=163, Percent_Identity=28.2208588957055, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 22036; Mature: 22036
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIPQENTYSKIEVKKSIFLSYIFHVKGKEEINKILKEYKLKFKNATHVVYGFRIGNSN CEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC SFISGMNDDKEPRSTAGKPTLEAILNKNLTDTLIITVRYFGGTLLGKQGLTKAYSKAAQE CEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCEEECCCCHHHHHHHHHHH VINKSNLIEKEEMETLCLNLNYNQYNLLIRIKNKMGIKIIDANFLDKINTTIKFNTKNKK HHHHHCCCCHHHHHEEEEECCCCEEEEEEEEECCCCEEEECCHHHHCCCCEEEEECCCHH NIMTFLQENSLI HHHHHHHCCCCC >Mature Secondary Structure MILIPQENTYSKIEVKKSIFLSYIFHVKGKEEINKILKEYKLKFKNATHVVYGFRIGNSN CEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC SFISGMNDDKEPRSTAGKPTLEAILNKNLTDTLIITVRYFGGTLLGKQGLTKAYSKAAQE CEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCEEECCCCHHHHHHHHHHH VINKSNLIEKEEMETLCLNLNYNQYNLLIRIKNKMGIKIIDANFLDKINTTIKFNTKNKK HHHHHCCCCHHHHHEEEEECCCCEEEEEEEEECCCCEEEECCHHHHCCCCEEEEECCCHH NIMTFLQENSLI HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]